mRNA_P-wetherbeei_contig5853.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: A0A836CIM9_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIM9_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.190e-55 Identity = 87/135 (64.44%), Postives = 107/135 (79.26%), Query Frame = 1
Query: 13 GKIIDLIRADQ---KPFSSLEYFPPRSESGVQNLRDRLARMALTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNMPIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLV 408
KI DLI A Q KPF SLE+FPPR+ +GV NLR+R+ R+ P F+DFTWGAGG+TA+LTL L LE K GL NMH+TCTNMP+ KID+ALQACR++G+ NIVALRGDPPAG+++W+A+EGG CALDLV
Sbjct: 14 SKISDLIAAAQELRKPFVSLEFFPPRTVAGVVNLRERIQRLKRVAPFFIDFTWGAGGNTADLTLDLVLEAKLEHGLEPNMHLTCTNMPVLKIDNALQACREHGVRNIVALRGDPPAGENQWLASEGGFKCALDLV 148
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: A0A6H5JB66_9PHAE (Methylenetetrahydrofolate reductase (NAD(P)H) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB66_9PHAE) HSP 1 Score: 185 bits (470), Expect = 8.540e-55 Identity = 90/144 (62.50%), Postives = 105/144 (72.92%), Query Frame = 1
Query: 4 EHDGKIIDLIRADQKP--------FSSLEYFPPRSESGVQNLRDRLARMALTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNMPIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLVK 411
E D KII LI+A K F SLE+FPPR+++GV+NL +RL RM T PLFVDFTWGAGGSTAELTL LT K+ GL NMH+TCTNMP++KID AL C+++GI NIVALRGDPP G W A EGG +CALDLVK
Sbjct: 4 EPDTKIIKLIQASAKEALTEGGAGFQSLEFFPPRTDTGVKNLMERLGRMKATKPLFVDFTWGAGGSTAELTLDLTTRTKKEHGLVPNMHLTCTNMPVDKIDHALAQCKEHGIRNIVALRGDPPTGSDTWEATEGGFSCALDLVK 147
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: A0A7S1C6C6_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6C6_9STRA) HSP 1 Score: 182 bits (463), Expect = 2.620e-54 Identity = 88/146 (60.27%), Postives = 106/146 (72.60%), Query Frame = 1
Query: 16 KIIDLIRADQ--------------KPFSSLEYFPPRSESGVQNLRDRLARMALTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNMPIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLVK 411
K+I+ IRA Q KPF + EY+PPR++ GV NL RL RMA +PL+VDFTWGAGGSTA+LTL LT+E K+R GL NMH+TCTNMP+EKI AL+ + GITNIVALRGDPPAG+++W A EGG CALDLVK
Sbjct: 3 KLIEKIRAHQAAAGEETKDGEPTGKPFIAFEYYPPRTDDGVANLYKRLGRMAQQEPLYVDFTWGAGGSTADLTLELTVESKKRFGLEPNMHLTCTNMPVEKITTALEGAKAAGITNIVALRGDPPAGEAKWEAVEGGFACALDLVK 148
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: A0A836C869_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C869_9STRA) HSP 1 Score: 180 bits (456), Expect = 6.700e-53 Identity = 85/144 (59.03%), Postives = 102/144 (70.83%), Query Frame = 1
Query: 10 DGKIIDLIRADQ-----------KPFSSLEYFPPRSESGVQNLRDRLARMALTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNMPIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLV 408
D K++D+I A KP LE+FPPR+ GV NLR+RL R+ P+F DFTWGAGGSTA+LTL LTLE K GLR NMH+TCTNMP+E+I+ AL+ CR+ G+TNIVALRGDPPAG W +EGGL CALDLV
Sbjct: 8 DEKVVDVIAAASEGAFNDAGECVKPLVGLEFFPPRTTQGVDNLRERLQRLKKVGPVFADFTWGAGGSTADLTLDLTLEAKHAHGLRPNMHLTCTNMPLERIESALRRCREEGVTNIVALRGDPPAGADHWERSEGGLGCALDLV 151
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: A0A7S3RLW6_9SPIT (Methylenetetrahydrofolate reductase (NAD(P)H) (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RLW6_9SPIT) HSP 1 Score: 168 bits (426), Expect = 3.710e-51 Identity = 78/134 (58.21%), Postives = 93/134 (69.40%), Query Frame = 1
Query: 10 DGKIIDLIRADQKPFSSLEYFPPRSESGVQNLRDRLARMALTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNMPIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLVK 411
D KI DLI + + S EYFPPR++ GV+NLR R+ RM +P+F DFTWGAGGST+ELTL LT K G ANMH+TCTN E + DAL C++ G+ NIVALRGDPP G +W A EGG CALDLVK
Sbjct: 6 DKKISDLIATTKPGWFSFEYFPPRTDEGVENLRKRIVRMKNLNPMFTDFTWGAGGSTSELTLTLTSAAKNEYGCVANMHLTCTNQKAEMVGDALTKCKELGVRNIVALRGDPPRGSEKWEATEGGFNCALDLVK 139
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: W7TUD6_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUD6_9STRA) HSP 1 Score: 175 bits (443), Expect = 7.780e-51 Identity = 83/138 (60.14%), Postives = 104/138 (75.36%), Query Frame = 1
Query: 1 MEHD--GKIIDLIRADQKPFSSLEYFPPRSESGVQNLRDRLARMALTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNMPIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLV 408
ME D G++++ + P+ S E+FPP++ GV+ L +RLA MA +PLFVDFTWGAGGSTAELTL LT+E +RR GL ANMH+TCTNMP EK+ DAL++ +D GITNI+ALRGDPP GQ W EGG + ALDLV
Sbjct: 13 MEDDRIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLV 150
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: A0A6V1V0A8_HETAK (Methylenetetrahydrofolate reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V0A8_HETAK) HSP 1 Score: 176 bits (446), Expect = 3.720e-49 Identity = 81/138 (58.70%), Postives = 104/138 (75.36%), Query Frame = 1
Query: 10 DGKIIDLIRADQ----KPFSSLEYFPPRSESGVQNLRDRLARMALTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNMPIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLVK 411
+GK I L+ ++ KPF SLE+FPP++ GV+NL +R+ RM DPLFVDFTWGAGGST+ELTL L+L+ ++ +G++ANMH+TCTNM K+D AL+ C+ GI NI+ALRGDPP GQ W A EGG CALDLVK
Sbjct: 3 EGKKISLMAEERAREGKPFVSLEFFPPKTAKGVENLVERIQRMKSIDPLFVDFTWGAGGSTSELTLDLSLKAQQEIGVQANMHLTCTNMEAAKVDAALEGCKRGGIRNILALRGDPPEGQEAWEATEGGFACALDLVK 140
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: A0A7R9WQJ7_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WQJ7_9STRA) HSP 1 Score: 166 bits (419), Expect = 4.240e-49 Identity = 87/143 (60.84%), Postives = 103/143 (72.03%), Query Frame = 1
Query: 10 DGKIIDLIRADQ---KPFSSLEYFPPRSESGVQNLRDRLARMA-LTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNM-----PIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLVK 411
D KIIDL++ ++ KP S+E+FPPR+E GV+NL R+ RM DPLF D TWGAGGSTAELTL L+ R+ G +NMH+TCTNM P + + DALQ +DNGI NIVALRGDPPAGQ EW AAEGG CALDLVK
Sbjct: 8 DTKIIDLLKQNKDESKPKISIEFFPPRTEVGVKNLHARMDRMKNAIDPLFTDMTWGAGGSTAELTLDLSAH-SRKAGHVSNMHLTCTNMEKDGDPKKAVHDALQTAQDNGIRNIVALRGDPPAGQDEWKAAEGGFACALDLVK 149
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: A0A7S1ALW9_NOCSC (Methylenetetrahydrofolate reductase (NAD(P)H) (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ALW9_NOCSC) HSP 1 Score: 164 bits (415), Expect = 1.390e-48 Identity = 76/134 (56.72%), Postives = 96/134 (71.64%), Query Frame = 1
Query: 10 DGKIIDLIRADQKPFSSLEYFPPRSESGVQNLRDRLARMALTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNMPIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLVK 411
D + +L+ A + + S EYFPPR+E GV+NL R+ RM DPLF+DFTWGAGGST++LT+ L + K G ANMH+TCTNM +K+D AL C+ GI N+VALRGDPP G+ +W A EGG TCALDLVK
Sbjct: 9 DSMLNELMSARKDTWYSFEYFPPRTEEGVKNLYKRILRMKTLDPLFLDFTWGAGGSTSDLTMQLCDKVKNEFGAVANMHLTCTNMEKDKVDVALADCKKFGICNLVALRGDPPRGEDKWEATEGGFTCALDLVK 142
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Match: A0A7S0A5S6_9DINO (Methylenetetrahydrofolate reductase (Fragment) n=2 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A5S6_9DINO) HSP 1 Score: 168 bits (426), Expect = 6.790e-48 Identity = 79/134 (58.96%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 10 DGKIIDLIRADQKPFSSLEYFPPRSESGVQNLRDRLARMALTDPLFVDFTWGAGGSTAELTLGLTLECKRRLGLRANMHVTCTNMPIEKIDDALQACRDNGITNIVALRGDPPAGQSEWVAAEGGLTCALDLVK 411
D KI DL+ + S EYFPP++E GVQ LR+R+ RM PLF DFTWGAGGST+ELTL LT K G ANMH+TCTN E +AL AC+ G+ NIVALRGDPP G +W A EGG TCALDLVK
Sbjct: 8 DAKIADLVAKASPGWFSFEYFPPKTEEGVQKLRNRIVRMKALKPLFTDFTWGAGGSTSELTLQLTSAAKNEFGCVANMHLTCTNQKSEMCGEALDACKAVGVRNIVALRGDPPRGHEKWTAIEGGFTCALDLVK 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5853.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5853.1.1 >prot_P-wetherbeei_contig5853.1.1 ID=prot_P-wetherbeei_contig5853.1.1|Name=mRNA_P-wetherbeei_contig5853.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp MEHDGKIIDLIRADQKPFSSLEYFPPRSESGVQNLRDRLARMALTDPLFVback to top mRNA from alignment at P-wetherbeei_contig5853:212..1203- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5853.1.1 ID=mRNA_P-wetherbeei_contig5853.1.1|Name=mRNA_P-wetherbeei_contig5853.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=992bp|location=Sequence derived from alignment at P-wetherbeei_contig5853:212..1203- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5853:212..1203- >mRNA_P-wetherbeei_contig5853.1.1 ID=mRNA_P-wetherbeei_contig5853.1.1|Name=mRNA_P-wetherbeei_contig5853.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig5853:212..1203- (Phaeothamnion wetherbeei SAG_119_79)back to top |