mRNA_P-wetherbeei_contig585.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig585.2.1 vs. uniprot
Match: A0A835YQW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW7_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.160e-18 Identity = 60/140 (42.86%), Postives = 75/140 (53.57%), Query Frame = 1
Query: 202 DFTHYRPIEREAAPDLRVARLHLSARKAIKRGRPVWARSFYELVMYHWNERPCDCALAQSYLLLGLLEQKEKRPHNARAAFREGCARCPRCARLYQAWALFESKQGNLRRARQLIERAVRLDASLKDVLRWRIFAAASDA 621
+ T P E+ LRV RLHLSARKAIK WA Y V+ W A++YLL+ L EQ+ + AR F G A C +L +WALFESK G + A L + +V LD SL VLRW++FA AS A
Sbjct: 67 ETTRGPPSEQLGGYQLRVERLHLSARKAIKHKHADWASRMYTYVLTAWTSELDSQDTARTYLLMALNEQRLGQYDAARLVFMRGVAHC-HSPKLLLSWALFESKHGRMDAALALAQHSVELDRSLAPVLRWKMFADASAA 205
BLAST of mRNA_P-wetherbeei_contig585.2.1 vs. uniprot
Match: K8YSD5_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSD5_NANGC) HSP 1 Score: 80.9 bits (198), Expect = 1.010e-13 Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 1
Query: 211 HYRPIE-REAAP-DLRVARLHLSARKAIKRGRPVWARSFYELVMYHWNERPCDCALAQSYLLLGLLEQKEKRPHNARAAFREGCARCPRCARLYQAWALFESKQGNLRRARQLIERAVRLDASLKDVLRWRIFAAASDAAXXXXXXXXGTTGRPLA 672
+YRP+ + P D+R A LH+SARKAIK G+ AR FYEL ++ W + A+A +Y L LLEQ+ + AR F+E AR P ARL+QA I AV D SL+ VL+W+++ + A XXXXXX G P A
Sbjct: 78 NYRPLPPSDNDPLDVRCALLHISARKAIKSGKMEIARRFYELFLFKWKGYRTENAIAHTYFLWALLEQRAEDYSKARRLFQEATARYPTHARLFQAXXXXXXXXXXXXXXXXXIASAVEHDKSLEPVLKWKMWGLSPAEAAAXXXXXXAGGGAPRA 233
BLAST of mRNA_P-wetherbeei_contig585.2.1 vs. uniprot
Match: A0A7S2IFI1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IFI1_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 8.940e-6 Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 265 HLSARKAIKRGR-----PVWARSFYELVMYHWNERPCDCA-LAQSYLLLGLLEQKEKRPHNARAAFRE---------GCARCPRCARLYQAWALFESKQGNLRRARQLIERAVRLDASLKDVLRWRIF 603
H A + IKRG ++ R+ E++ + CD A LA S LLL LL Q+ + R+ F G C A++ QA+ALFE KQG+ ++ +L+ RAV++D LK VL W+ F
Sbjct: 197 HYFALRKIKRGELRHAESIYRRTIQEIMDEDSEDGGCDHARLAVSTLLLALLMQRMRDVKGTRSVFNNFFRVAVIENGEKDCACSAKVLQAYALFEMKQGHSIKSLELVTRAVQMDERLKPVLEWKQF 324
BLAST of mRNA_P-wetherbeei_contig585.2.1 vs. uniprot
Match: A0A7S1BZX4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZX4_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 3.550e-5 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 358 CD-CALAQSYLLLGLLEQKEKRPHNARAAFREGCAR--------CPRCARLYQAWALFESKQGNLRRARQLIERAVRLDASLKDVLRWRIFA 606
CD ALA S LLL LL+Q+ AR+ F + C A++ QA+ALFE KQG ++ +LIERAV LD +L +VLRW+ F+
Sbjct: 218 CDHSALASSTLLLALLKQRMGDIKGARSVFLKFFRHISETEVDSCSCSAKVLQAYALFEMKQGFSLKSLKLIERAVSLDGNLSNVLRWKQFS 309
BLAST of mRNA_P-wetherbeei_contig585.2.1 vs. uniprot
Match: A0A7S2M7A3_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M7A3_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 4.010e-5 Identity = 48/151 (31.79%), Postives = 72/151 (47.68%), Query Frame = 1
Query: 211 HYRPIEREAAPDLRVARLHLSARKAIKRGRPVWARSFYELVMYHW----NERPCDCA-LAQSYLLLGLLEQKEKRPHNARAAF-----------REGCARCPRCARLYQAWALFESKQGNLRRARQLIERAVRLDASLKDVLRWRIFAAAS 615
HY P+ + +L A H AR IK G+ A Y ++ +E CD A LA S LLL L Q+ RA F + +C A++ QA+ALFE K G ++ ++I++AV++D L+ VL W+ F A+
Sbjct: 88 HYDPLNDKNFVEL--ATKHYYARFLIKNGKLTLAEKIYRRIINELEAEDSEEDCDHAKLAVSTLLLALHMQRYDDIKATRAVFVNFFRRVALTEEDEEVKCSCSAKVLQAYALFEMKNGYSAKSLEIIQKAVKMDEELRPVLEWKQFRDAA 236
BLAST of mRNA_P-wetherbeei_contig585.2.1 vs. uniprot
Match: B7FP56_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FP56_PHATC) HSP 1 Score: 55.1 bits (131), Expect = 6.710e-5 Identity = 49/136 (36.03%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 253 VARLHLSARKAIKRGRPVWARSFYELVMYHWN--ERPCDCA-LAQSYLLLGLLEQKEKRPHNARAAFR-------------EGCARCPRCARLYQAWALFESKQGNLRRARQLIERAVRLDASLKDVLRWRIFAAA 612
+A+ H A + IK G+P A + Y V+ + + CD A LA + LLL LL Q+ R+ F E CA C A++ QA+ALFE KQG+ ++ ++ +AV+LD SL VLRW+ F A
Sbjct: 106 LAKKHYFALRKIKDGKPGHAETIYRRVIDELSADDEHCDHAKLAVTTLLLALLLQRLGDIKQTRSVFLNFFRIAVLESAKDEECA-CS--AKVLQAYALFEMKQGHSLKSLDIVCKAVKLDPSLAPVLRWKQFRDA 238
BLAST of mRNA_P-wetherbeei_contig585.2.1 vs. uniprot
Match: A0A7S4DX25_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DX25_9EUKA) HSP 1 Score: 53.5 bits (127), Expect = 7.560e-5 Identity = 41/120 (34.17%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 262 LHLSARKAIKRGRPVWARSFYELVMYHWNER---PCDCALAQSYLLLGLLEQKEKRPHNARAAFREGCARCPRCARLYQAWALFESKQ-GNLRRARQLIERAVRLDASLK-DVLRWRIFA 606
LH AR AI++ A Y+ ++Y + E P L +YLL+ L Q+EKR +AR F+EG R ++L A AL ESKQ G + AR +++ + D + +W+IF+
Sbjct: 39 LHARARTAIRQKNYNVASEIYKSILYRFPEHVEVPRKM-LEDTYLLMALQHQREKRIEDARITFKEGLKRTSLSSKLLTALALMESKQEGRIYCARSIVKGVKKCDPERGVPLFKWKIFS 157
BLAST of mRNA_P-wetherbeei_contig585.2.1 vs. uniprot
Match: A0A7S4RHI8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RHI8_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 9.720e-5 Identity = 48/134 (35.82%), Postives = 66/134 (49.25%), Query Frame = 1
Query: 253 VARLHLSARKAIKRGRPVWARSFYELVMYH-WNERP-CDCA-LAQSYLLLGLLEQKEKRPHNARAAF---------REGCARCPRCARLYQAWALFESKQGNLRRARQLIERAVRLDASLKDVLRWRIFAAASD 618
+A H A + IK G A Y + NE CD A LA S LLL LL Q+ + R+ F G C A++ QA+ALFE KQG+ ++ +L+ RAV++D LK VL W+ F A +
Sbjct: 158 MATRHYFALRKIKNGELKHAEKIYRKTIDDILNEDDGCDHARLAVSTLLLALLMQRMQDVKGTRSVFLNFFRVAVIENGERDCACSAKVLQAYALFEMKQGHSIKSLELVRRAVQMDEKLKPVLEWKQFRDAKN 291 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig585.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig585.2.1 >prot_P-wetherbeei_contig585.2.1 ID=prot_P-wetherbeei_contig585.2.1|Name=mRNA_P-wetherbeei_contig585.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp MKPSVCSVVLSMLPIAAALLPVSFPGVHLLVAASGATSAPKRKHGLACCIback to top mRNA from alignment at P-wetherbeei_contig585:3217..4950+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig585.2.1 ID=mRNA_P-wetherbeei_contig585.2.1|Name=mRNA_P-wetherbeei_contig585.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1734bp|location=Sequence derived from alignment at P-wetherbeei_contig585:3217..4950+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig585:3217..4950+ >mRNA_P-wetherbeei_contig585.2.1 ID=mRNA_P-wetherbeei_contig585.2.1|Name=mRNA_P-wetherbeei_contig585.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig585:3217..4950+ (Phaeothamnion wetherbeei SAG_119_79)back to top |