mRNA_P-wetherbeei_contig57976.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: UPI000931A052 (hypothetical protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000931A052) HSP 1 Score: 80.1 bits (196), Expect = 2.000e-18 Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK 120
FTDFEYGSDWARFSRAASKG++C++GGG DCQ+QARPCK
Sbjct: 73 FTDFEYGSDWARFSRAASKGISCSQGGGSIDCQIQARPCK 112
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: UPI00039C81E9 (hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00039C81E9) HSP 1 Score: 79.3 bits (194), Expect = 4.140e-18 Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGG-FDCQLQARPCK 120
FTDFEYGSDWARFSRAASKG+TC+ GGGG FDCQ++ARPCK
Sbjct: 73 FTDFEYGSDWARFSRAASKGMTCSGGGGGSFDCQIEARPCK 113
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: UPI0003801B68 (hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI0003801B68) HSP 1 Score: 65.9 bits (159), Expect = 8.220e-13 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK 120
FTDFEYGSDWARFS+A K ++C+ G+DCQ++ARPC+
Sbjct: 73 FTDFEYGSDWARFSKAVGKRISCSSSSSGYDCQVEARPCR 112
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: UPI000930204E (hypothetical protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000930204E) HSP 1 Score: 64.3 bits (155), Expect = 3.470e-12 Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK 120
FTDFEYGS WARFS AA+K ++C++ GG + CQ++ARPC+
Sbjct: 74 FTDFEYGSAWARFSNAAAKRVSCSQSGGSYSCQVEARPCR 113
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: UPI0019CC9608 (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019CC9608) HSP 1 Score: 62.8 bits (151), Expect = 1.250e-11 Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK 120
FTD EYG WARFSRAASK + C+RGG G+ C +ARPC+
Sbjct: 70 FTDLEYGRAWARFSRAASKKIGCSRGGSGWSCDAEARPCR 109
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: A0A6I0EFT5_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EFT5_HYPSQ) HSP 1 Score: 60.1 bits (144), Expect = 1.490e-10 Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK 120
F D EYGSDWAR+SRA SK + C R G+ C ++ARPCK
Sbjct: 72 FVDLEYGSDWARYSRAHSKSMKCERSASGWSCMVEARPCK 111
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: UPI00092FEF80 (hypothetical protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI00092FEF80) HSP 1 Score: 60.1 bits (144), Expect = 1.640e-10 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK 120
FTD EYGS WARFSRA S+ + C+ GGG+ C ++ARPCK
Sbjct: 76 FTDLEYGSAWARFSRAGSRKIGCSPTGGGWTCDVEARPCK 115
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: A0A3S0YS33_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A3S0YS33_HYPSQ) HSP 1 Score: 59.7 bits (143), Expect = 2.420e-10 Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK 120
FTDFEYGSDWA +S A+SK ++C+ GG + C L ARPC+
Sbjct: 75 FTDFEYGSDWAHWSLASSKSVSCSGAGGSWGCDLNARPCR 114
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: A0A6I0EP08_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EP08_HYPSQ) HSP 1 Score: 57.8 bits (138), Expect = 1.150e-9 Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK 120
FTD EYGS WARFSRAAS+ + C+R G+ C + RPC+
Sbjct: 70 FTDLEYGSSWARFSRAASRRMGCSRSAAGWTCDAEGRPCR 109
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Match: UPI000AFBCD6A (hypothetical protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI000AFBCD6A) HSP 1 Score: 57.0 bits (136), Expect = 4.140e-9 Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 1 FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK 120
F D EYGSDWA++ +AA K ++C + G G+ C + ARPCK
Sbjct: 98 FADLEYGSDWAKYGKAAGKSVSCNQSGSGWGCDVAARPCK 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57976.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57976.1.1 >prot_P-wetherbeei_contig57976.1.1 ID=prot_P-wetherbeei_contig57976.1.1|Name=mRNA_P-wetherbeei_contig57976.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=41bp FTDFEYGSDWARFSRAASKGLTCTRGGGGFDCQLQARPCK*back to top mRNA from alignment at P-wetherbeei_contig57976:384..506- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57976.1.1 ID=mRNA_P-wetherbeei_contig57976.1.1|Name=mRNA_P-wetherbeei_contig57976.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig57976:384..506- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57976:384..506- >mRNA_P-wetherbeei_contig57976.1.1 ID=mRNA_P-wetherbeei_contig57976.1.1|Name=mRNA_P-wetherbeei_contig57976.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig57976:384..506- (Phaeothamnion wetherbeei SAG_119_79)back to top |