mRNA_P-wetherbeei_contig57954.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: A0A127F6C3_9HYPH (Ion transport 2 domain-containing protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F6C3_9HYPH) HSP 1 Score: 181 bits (459), Expect = 2.950e-56 Identity = 89/136 (65.44%), Postives = 106/136 (77.94%), Query Frame = 1
Query: 1 AGGFVSFINFGIHAMMTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIALTVAHVLEISLWAWFMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMKMADVQIGRR 408
AGG VS +NFG+HA++TG++VV RH A TDDLHVF R++ALL T++AL +AH +EI++WA F GI FEFAFENY ALGYGD V GG +RLIGPI ALNGLLLIGWSVAIIFEVMKMADVQ+ R+
Sbjct: 7 AGGLVSLVNFGLHAIITGIVVVAARHTAAATDDLHVFARVSALLMITMVALMIAHTVEIAVWASFYALNGIETEKASAFEFAFENYTALGYGDAVPGGRFRLIGPITALNGLLLIGWSVAIIFEVMKMADVQVARK 142
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: A0A537KS25_9PROT (Two pore domain potassium channel family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537KS25_9PROT) HSP 1 Score: 171 bits (433), Expect = 4.150e-52 Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 1 AGGFVSFINFGIHAMMTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIALTVAHVLEISLWAWFMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMKMADVQIGR 405
AGG VSF+NFGIHA++TG+++ TRH A RTD LH F RLTALLT T+I L +AHV EI +WA + G+ + PFEFAFENY ALGYGD V RL+GPI ALNGLLLIGWSVAIIFEVM+MA+VQ+ R
Sbjct: 19 AGGLVSFLNFGIHALVTGIVIEATRHTAKRTDHLHAFFRLTALLTITVICLMIAHVCEIGVWAAYYDFTGLKFRSATPFEFAFENYTALGYGDPVPPESRRLLGPITALNGLLLIGWSVAIIFEVMRMAEVQVAR 153
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: A0A1Q4DBI6_9HYPH (Ion_trans_2 domain-containing protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DBI6_9HYPH) HSP 1 Score: 157 bits (396), Expect = 7.290e-47 Identity = 83/123 (67.48%), Postives = 93/123 (75.61%), Query Frame = 1
Query: 46 MTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIALTVAHVLEISLWAWFMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMKMADVQIGRRSR 414
MT IVV+T IA RT LHV RL LLT T++AL +AHVLEI+LWA F GI APNV FEFAFENY ALGYGD V G G RLIGP+ +LNGLLLIGWSVAIIFEVM+MA+VQ +R R
Sbjct: 1 MTAAIVVITNRIAHRTGHLHVVARLIPLLTVTMVALMIAHVLEIALWAAFYDFAGIVAPNVNSFEFAFENYTALGYGDAVPGTGQRLIGPVTSLNGLLLIGWSVAIIFEVMRMAEVQFEKRPR 123
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: A0A1Q5SAS8_9BRAD (Metal transporter n=1 Tax=Bradyrhizobium sp. NAS80.1 TaxID=1680159 RepID=A0A1Q5SAS8_9BRAD) HSP 1 Score: 110 bits (275), Expect = 3.620e-28 Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 4 GGFVSFINFGIHAMMTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIALTVAHVLEISLWAW-FMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMKMADVQIG 402
G VS IN GIHA++T + + + R A R + H RL ++ AT L VAH+LEI +WAW + + AP+ + FAF NY LGYGD+ WRLIGP+ A+NG+LL GWS AI+FEV++ +G
Sbjct: 8 GALVSVINIGIHALVTVVAIWIARSAALRKTE-HPRWRLMGVMMATAAVLKVAHMLEILVWAWTYDIVDATAAPDSDLLYFAFVNYTTLGYGDITPAPAWRLIGPMTAMNGVLLFGWSAAILFEVLRKTLDYLG 140
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: A0A0R3D017_9BRAD (Metal transporter n=6 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3D017_9BRAD) HSP 1 Score: 106 bits (265), Expect = 1.020e-26 Identity = 56/134 (41.79%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 4 GGFVSFINFGIHAMMTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIALTVAHVLEISLWAW-FMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMKMADVQIG 402
G +S +N GIHA++T + V + R AG + L ++ AT L VAH LE+ +WAW + + + + AP + FAF NY LGYGD+ WRLIGP+ A+NG+LL GWS AI+FEV++ +G
Sbjct: 8 GALISAVNIGIHALVTLVAVAIARS-AGLRKVERPRLHLMGVMVATAAVLNVAHALEVLIWAWTYALVRAVAAPESDLVYFAFVNYTTLGYGDITPVREWRLIGPLTAMNGVLLFGWSAAILFEVLRKTLDHVG 140
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: A0A1H8JPF9_9BRAD (Ion channel n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A1H8JPF9_9BRAD) HSP 1 Score: 106 bits (264), Expect = 1.400e-26 Identity = 59/133 (44.36%), Postives = 78/133 (58.65%), Query Frame = 1
Query: 4 GGFVSFINFGIHAMMTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIALTVAHVLEISLWAWFMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMKMADVQIG 402
G VS IN GIHA++T + V + R AG ++L A++ AT L VAH LE+ +WAW AP + FAF NY LGYGD+ WRLIGP+ A+NG+LL GWS AI+FEV++ +G
Sbjct: 8 GALVSAINIGIHALVTVVAVAIARG-AGHRRTGRPRLQLMAVMVATAAVLEVAHALEVLVWAWTYHIVQAAAPGSDLLYFAFVNYTTLGYGDITPVREWRLIGPLTAMNGVLLFGWSAAILFEVLRKTLDYVG 139
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: UPI001BA84D98 (two pore domain potassium channel family protein n=1 Tax=Bradyrhizobium manausense TaxID=989370 RepID=UPI001BA84D98) HSP 1 Score: 105 bits (262), Expect = 2.520e-26 Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 1
Query: 4 GGFVSFINFGIHAMMTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIALTVAHVLEISLWAWFMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMK-----MADVQ 396
G VS IN GIHA++T + + + R I R + ++L ++ A AL VAH+LEI +WAW P + FAF NY LGYGD+V WRLIGP+ A+NG+LL GWS A++FEV++ +ADV+
Sbjct: 8 GALVSAINIGIHALVTVVAIAIARSIGLRKTE-RPRLQLMGVMIAAAAALKVAHMLEIVVWAWTYHIVQAADPGSDLLYFAFVNYTTLGYGDIVPVQAWRLIGPLTAMNGVLLFGWSAAVLFEVLRKTLDHLADVK 142
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: A0A7S7URR2_9BRAD (Two pore domain potassium channel family protein n=1 Tax=Bradyrhizobium sp. CCBAU 53338 TaxID=1325111 RepID=A0A7S7URR2_9BRAD) HSP 1 Score: 103 bits (258), Expect = 9.830e-26 Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 4 GGFVSFINFGIHAMMTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIALTVAHVLEISLWAW-FMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMKMADVQIG 402
G VS IN GIHA++T + V + R AG + + L ++ AT L +AH LEI +WAW + + + + E FAF NY LGYGD+ WRL+GP+ A+NG+LL GWS AI+FEV++ +G
Sbjct: 8 GALVSAINIGIHALVTVVAVAIARS-AGLRVTVRPRLHLMGVMVATAAVLEIAHALEILVWAWTYDIVRAAPVSDSELLYFAFVNYTTLGYGDITPVQAWRLLGPLTAMNGVLLFGWSAAILFEVLRKTLDHVG 140
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: A0A1E3W752_9HYPH (Ion_trans_2 domain-containing protein n=1 Tax=Methyloceanibacter superfactus TaxID=1774969 RepID=A0A1E3W752_9HYPH) HSP 1 Score: 103 bits (258), Expect = 1.100e-25 Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 1
Query: 4 GGFVSFINFGIHAMMTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIALTVAHVLEISLWAWFMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMKMAD 390
GG S N +HA++ G I + R + + F++ T ++ AT L + H E+ LWA+ A G T PN + FAF NY LGYGDVV W L+GP+ ALNG++LIGWS A+IFE+++ +
Sbjct: 17 GGGASLANLIVHAILLGAIAWVVRRLRMSDGSIPSFLQYTLVIVATGTLLVIGHFGEVVLWAYTYAAVGATPPNTDLVYFAFGNYTTLGYGDVVPVPKWHLLGPMTALNGVMLIGWSTALIFEILRRSS 145
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Match: A0A7S9D9E2_9BRAD (Two pore domain potassium channel family protein n=1 Tax=Bradyrhizobium genosp. B TaxID=83627 RepID=A0A7S9D9E2_9BRAD) HSP 1 Score: 103 bits (256), Expect = 2.020e-25 Identity = 60/129 (46.51%), Postives = 76/129 (58.91%), Query Frame = 1
Query: 4 GGFVSFINFGIHAMMTGLIVVMTRHIAGR---TDDLHVFMRLTALLTATLIALTVAHVLEISLWAWFMVAKGITAPNVEPFEFAFENYVALGYGDVVAGGGWRLIGPIMALNGLLLIGWSVAIIFEVMK 381
G VS I+ GIHAM T + + + R + R T LH L ++ AT AL VAH LEI +WAW P + FAF NY LGYGD+ G WRLIGP+ A+NG+LL GWS AI+FEV++
Sbjct: 8 GALVSAIDIGIHAMATVVAISIARAASLRLTETPRLH----LMGVMIATAAALMVAHTLEILVWAWTYGIIQAAPPGSDLLYFAFVNYTTLGYGDITPVGEWRLIGPLTAMNGILLFGWSAAILFEVLR 132 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57954.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57954.1.1 >prot_P-wetherbeei_contig57954.1.1 ID=prot_P-wetherbeei_contig57954.1.1|Name=mRNA_P-wetherbeei_contig57954.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp AGGFVSFINFGIHAMMTGLIVVMTRHIAGRTDDLHVFMRLTALLTATLIAback to top mRNA from alignment at P-wetherbeei_contig57954:6..422+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57954.1.1 ID=mRNA_P-wetherbeei_contig57954.1.1|Name=mRNA_P-wetherbeei_contig57954.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig57954:6..422+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57954:6..422+ >mRNA_P-wetherbeei_contig57954.1.1 ID=mRNA_P-wetherbeei_contig57954.1.1|Name=mRNA_P-wetherbeei_contig57954.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig57954:6..422+ (Phaeothamnion wetherbeei SAG_119_79)back to top |