mRNA_P-wetherbeei_contig57886.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A5C7NI52_9PROT (Diaminopimelate epimerase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NI52_9PROT) HSP 1 Score: 65.5 bits (158), Expect = 1.120e-10 Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNVRTTVEVERIAEGILDHEWLARRNL 231
EAET++CGTG+ A ALIA L A PV + +GGG LRI F + F++VR E IA G +D WL R L
Sbjct: 237 EAETLACGTGSVATALIAHLLEKAPSPVTVLPTGGGTLRIDFRPVGNGRFEDVRLAGPAETIATGTVDEAWLRERKL 313
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A3B0WB98_9ZZZZ (Diaminopimelate epimerase (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0WB98_9ZZZZ) HSP 1 Score: 56.2 bits (134), Expect = 1.390e-8 Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNVRTTVEVERIAEGILDHEWL 216
E ET++CGTGATA AL+AA +G A PV I SGG L I FD + D+ NV I +G L E L
Sbjct: 10 EGETLACGTGATATALVAALVGRASSPVEIITSGGDRLVILFDLATDKTVHNVFLKGPAHVIYKGKLKAEAL 81
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A836SRX9_9BACT (Diaminopimelate epimerase n=1 Tax=Kiritimatiellae bacterium TaxID=2212473 RepID=A0A836SRX9_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 1.610e-8 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNVRTTVEVERIAEGILD 204
EAET +CGTG TA AL+AARLGL PV + ++GG L++ F+ S + F VR + E + +GI++
Sbjct: 202 EAETPACGTGITAAALVAARLGLVTSPVTVVSAGGDRLKVVFEVSGES-FSRVRLSGPAEYVFKGIVE 268
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A7Z9YYV2_9DELT (Diaminopimelate epimerase n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Z9YYV2_9DELT) HSP 1 Score: 57.8 bits (138), Expect = 5.840e-8 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNV 159
E ET++CGTGA A A+ AA G+ PVR++ SGG +L+I FD D H +NV
Sbjct: 207 EDETMACGTGAVAAAIFAAEKGVCSSPVRVTTSGGEQLKIVFDLQEDGHAENV 259
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A2V5P3Q0_9BACT (Diaminopimelate epimerase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5P3Q0_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 7.670e-8 Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNVRTTVEVERIAEGILD 204
E ET++CGTG TA ALI++R+ + PVR+ GG EL ++F+E+ + F VR T E + EG +D
Sbjct: 202 EGETLACGTGVTASALISSRVHQFRSPVRVQVQGGDELEVSFNET-NGQFAEVRLTGPAEFVFEGRID 268
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A432QWT8_9DELT (Diaminopimelate epimerase n=1 Tax=Desulfocapsa sp. TaxID=2066021 RepID=A0A432QWT8_9DELT) HSP 1 Score: 57.4 bits (137), Expect = 8.060e-8 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNV 159
E ET++CGTGA A A+ AA G+ PVR++ SGG +L+I FD D H +NV
Sbjct: 207 EDETMACGTGAVASAIFAAEKGVCSSPVRVTTSGGEQLKIVFDLQEDGHAENV 259
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A7C4LQU6_9BACT (Diaminopimelate epimerase n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7C4LQU6_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 1.060e-7 Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNVRTTVEVERIAEGILD 204
E ET++CGTG TA AL+ ARL P+R+ GG L +AFD+S D+ F NV T + + EG ++
Sbjct: 202 EGETLACGTGVTAAALVVARLEGFASPIRVRVQGGDVLEVAFDQSGDQ-FVNVTLTGPADFVFEGTIE 268
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A7C1GBS7_9DELT (Diaminopimelate epimerase n=2 Tax=Bacteria TaxID=2 RepID=A0A7C1GBS7_9DELT) HSP 1 Score: 56.6 bits (135), Expect = 1.550e-7 Identity = 34/76 (44.74%), Postives = 42/76 (55.26%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNVRTTVEVERIAEGILDHEWLARRN 228
E ET++CGTGATA AL+AA +G A PV I SGG L I FD + D+ NV I +G L E L +
Sbjct: 207 EGETLACGTGATATALVAALVGRASSPVEIITSGGDRLVILFDLATDKTVHNVFLKGPAHVIYKGELKAEALIENS 282
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A7C5EHB3_9BACT (Diaminopimelate epimerase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C5EHB3_9BACT) HSP 1 Score: 56.2 bits (134), Expect = 2.040e-7 Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNVRTTVEVERIAEGILDH 207
EAET++CGTG A AL+AAR GLA PPVR+ A+ G L + F S + F+NV + EG L +
Sbjct: 202 EAETLACGTGIVAGALVAARNGLATPPVRVRAASGDTLTVNFSRSGET-FENVTLQGPAVHVFEGDLTY 269
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Match: A0A0A2HYY7_9DELT (Diaminopimelate epimerase n=2 Tax=Desulfobulbaceae TaxID=213121 RepID=A0A0A2HYY7_9DELT) HSP 1 Score: 56.2 bits (134), Expect = 2.100e-7 Identity = 32/72 (44.44%), Postives = 40/72 (55.56%), Query Frame = 1
Query: 1 EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFQNVRTTVEVERIAEGILDHEWL 216
E ET++CGTGA A ALIA + +PPV++ SGG L +AFD R NV I EG+L E L
Sbjct: 206 EDETMACGTGAVAAALIAGLRRMVRPPVQVVTSGGERLTVAFDLPEGRGIGNVHLQGPARLIYEGLLTAESL 277 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57886.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57886.1.1 >prot_P-wetherbeei_contig57886.1.1 ID=prot_P-wetherbeei_contig57886.1.1|Name=mRNA_P-wetherbeei_contig57886.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=83bp EAETVSCGTGATAIALIAARLGLAKPPVRISASGGGELRIAFDESPDRHFback to top mRNA from alignment at P-wetherbeei_contig57886:2..250+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57886.1.1 ID=mRNA_P-wetherbeei_contig57886.1.1|Name=mRNA_P-wetherbeei_contig57886.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=249bp|location=Sequence derived from alignment at P-wetherbeei_contig57886:2..250+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57886:2..250+ >mRNA_P-wetherbeei_contig57886.1.1 ID=mRNA_P-wetherbeei_contig57886.1.1|Name=mRNA_P-wetherbeei_contig57886.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=249bp|location=Sequence derived from alignment at P-wetherbeei_contig57886:2..250+ (Phaeothamnion wetherbeei SAG_119_79)back to top |