mRNA_P-wetherbeei_contig57872.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: A0A0S8AZN2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8AZN2_9PROT) HSP 1 Score: 222 bits (565), Expect = 1.540e-70 Identity = 111/168 (66.07%), Postives = 132/168 (78.57%), Query Frame = 1
Query: 1 RELVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAEVDAP 504
RELVL R +RNALDL TTERL+ ++ A D V+LL G+G GFCAGSDVKEMA ++ RL IA+RKA+LM+ LA L+ PVV AVHGFALGGG MLAIGCDVV+TA+ A WRLPEVELGFFPPWG+EAL+ RV +ARAR LVWG PL+G+EA +LGLA+ P
Sbjct: 10 RELVLDRPRLRNALDLETTERLLAALDALAQDDQAAVVLLHGEGTGFCAGSDVKEMARVDLETRLRIAERKALLMQRLARLECPVVAAVHGFALGGGLMLAIGCDVVITASHAVWRLPEVELGFFPPWGLEALLARVSMARARRLVWGEAPLSGTEAAQLGLADEAVP 177
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: UPI001813F1A2 (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI001813F1A2) HSP 1 Score: 173 bits (438), Expect = 3.100e-51 Identity = 86/166 (51.81%), Postives = 115/166 (69.28%), Query Frame = 1
Query: 7 LVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAEVDAP 504
L+L R + RNAL A + L H++AAA D +R ++L G FCAGSD+KE+ G S+ + + A + R +A + +PVVCAV G+ALGGGF+LA+ CDVVVTATDA WRLPEV G+ PPWG++AL+ RVG RAR LVWG + G+EA RLG+A++ P
Sbjct: 13 LMLDRPQRRNALGTAGIQALDHALAAADQDDGVRAIVLTGAPPAFCAGSDLKELGGLSIADMCAHEEITAAVARKIALMTKPVVCAVEGYALGGGFILAVSCDVVVTATDAKWRLPEVANGWLPPWGLQALLARVGPVRARMLVWGVEAIDGAEAHRLGVADLVTP 178
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: B1G5X3_PARG4 (1,4-dihydroxy-2-naphthoyl-CoA synthase n=2 Tax=Burkholderiaceae TaxID=119060 RepID=B1G5X3_PARG4) HSP 1 Score: 165 bits (418), Expect = 3.150e-48 Identity = 81/164 (49.39%), Postives = 108/164 (65.85%), Query Frame = 1
Query: 1 RELVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAE 492
R+LVL R + RNAL A E+L + A D ++ ++L G FCAGSD+KE+ G S+D A + R +A L +PV+ AV GFALGGGF+LA+ CD+VV+A +A W LPEV G+ PPWG++AL+ RVG RAR LVWG P+ G EA RLG+A+
Sbjct: 10 RQLVLDRPQRRNALSQALMEQLEQELRRAESDASVAAIVLSGAPPAFCAGSDLKELGGLSIDHMCEHELETARIARGIAGLSKPVIAAVEGFALGGGFILAVSCDLVVSAVNARWHLPEVPNGWLPPWGLQALIARVGAVRARMLVWGDEPIDGVEAHRLGVAD 173
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: UPI000485A111 (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Paraburkholderia ferrariae TaxID=386056 RepID=UPI000485A111) HSP 1 Score: 165 bits (417), Expect = 4.460e-48 Identity = 82/164 (50.00%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 1 RELVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAE 492
R LVL R E RNAL + ++L + A DPA R ++L G FCAGSD+KE+ G S++E + A + R +A + +PV+ AV G+ALGGGF+LA CD+VVTA++A W LPEV G+ PPWG++AL+ RVG RAR LVWG P+ G EA RLG+A+
Sbjct: 10 RHLVLDRPERRNALGAESIQQLARELEVADRDPAARAIVLSGAPPAFCAGSDLKELGGLSIEEMCDHERDTAQVGRYIAGMSKPVIAAVEGYALGGGFILATSCDIVVTASNARWHLPEVVNGWLPPWGLQALLARVGAVRARLLVWGDSPIDGKEAHRLGVAD 173
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: A0A0A1FFU2_9BURK (Enoyl-CoA hydratase n=2 Tax=Oxalobacteraceae TaxID=75682 RepID=A0A0A1FFU2_9BURK) HSP 1 Score: 164 bits (415), Expect = 8.940e-48 Identity = 83/164 (50.61%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 1 RELVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAE 492
R L L+R RNALD E L ++ AA DPA+R ++L G FC+GSD+KE++ S+ E A + R++A L +PV+ AV GFALGGGF+LAI CDVVVTA++A W LPEV G+ PPWG++AL+ RVG RAR L W P+ G+EA RLG+A+
Sbjct: 10 RHLTLNRPARRNALDSKAIEELKDALQAADRDPAVRAIVLSGAAPAFCSGSDLKELSTMSIQEMCDSELVTAEVARSIAGLSKPVIAAVEGFALGGGFVLAISCDVVVTASNARWHLPEVPNGWLPPWGLQALLARVGAVRARLLTWAADPIDGNEAHRLGVAD 173
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: A0A327KSV4_9HYPH (Enoyl-CoA hydratase n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KSV4_9HYPH) HSP 1 Score: 163 bits (412), Expect = 2.610e-47 Identity = 84/166 (50.60%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 7 LVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAEVDAP 504
L+L R RNAL L ++ AA D ++ ++L G FCAGSD+KE+ G S+ A + R +A L +PVVCAV G+ALGGGF+LA+ CDVVVTA DA WRLPEV G+ PPWG++AL+ RVG RAR LVWG P+ G EA RLG+A++ AP
Sbjct: 13 LMLDRPARRNALGTEGGRALDAALVAADRDETVKAIVLAGAPPAFCAGSDLKELGGLSIPAMCDHEAITAAVARRIALLAKPVVCAVEGYALGGGFILAVSCDVVVTAADATWRLPEVANGWLPPWGLQALIARVGPVRARMLVWGAEPIDGREAHRLGVADLLAP 178
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: A0A327KZ90_9HYPH (Enoyl-CoA hydratase n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327KZ90_9HYPH) HSP 1 Score: 162 bits (409), Expect = 7.390e-47 Identity = 84/166 (50.60%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 7 LVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAEVDAP 504
L L R E RNAL + L ++A A D A+R ++L G FCAGSD+KE+ G S+ + A + R +A L +PVV AV G+ALGGGF+LA+ CDVVVTA DA WRLPEV G+ PPWG+ AL+ RVG RAR LVWG + G+EA RLG+A++ P
Sbjct: 13 LTLDRPERRNALGTDGIQALDRALATADRDDAVRAIVLTGAPPAFCAGSDLKELGGLSIPDMCAHEAVTAAVARQIALLSKPVVAAVEGYALGGGFILAVSCDVVVTAADAKWRLPEVANGWLPPWGLTALLARVGAVRARMLVWGVEAIDGTEAHRLGVADLLTP 178
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: A0A4Y8MHW1_9BURK (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Paraburkholderia dipogonis TaxID=1211383 RepID=A0A4Y8MHW1_9BURK) HSP 1 Score: 161 bits (407), Expect = 1.440e-46 Identity = 79/165 (47.88%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 1 RELVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAEV 495
R+LVL R + RNAL +L H + A DP++ ++L G FCAGSD+KE+ S+D A + R++A + +PV+ AV GFALGGGF+LA+ CD+VV+A++ W LPEV G+ PPWG++ALV RVG RAR LVW P+ G EA RLG+A+V
Sbjct: 10 RQLVLDRPQRRNALGEELMRQLAHELERAERDPSVNAIVLSGAAPAFCAGSDLKELGTLSIDGMCQHELETARIARSIAGVPKPVIAAVEGFALGGGFILAVSCDLVVSASNVRWHLPEVPNGWLPPWGLQALVARVGAVRARMLVWADSPIDGVEAHRLGVADV 174
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: UPI001BD097EF (enoyl-CoA hydratase/isomerase family protein n=2 Tax=unclassified Chelatococcus TaxID=2638111 RepID=UPI001BD097EF) HSP 1 Score: 161 bits (407), Expect = 1.960e-46 Identity = 82/166 (49.40%), Postives = 104/166 (62.65%), Query Frame = 1
Query: 7 LVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAEVDAP 504
L L+R E RNAL T L ++ A D A+ ++L G FCAGSD+KE+ S+D A + R + L +PVV AV GFALGGGF+LA CDVVVTA +A W LPEV G+ PPWG+ ALV R+G +AR L WG P+ G+EALRLG+A+ AP
Sbjct: 23 LTLNRPERRNALGRETMRALAQALDVAESDQAVGAIVLTGAAPAFCAGSDLKELGRLSVDGMRRHEAETAAIARRIGVLSKPVVAAVEGFALGGGFILAASCDVVVTAENARWHLPEVPNGWLPPWGLGALVARIGPTKARLLTWGAEPIDGTEALRLGVADFSAP 188
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Match: A0A149PC34_9BURK (Enoyl-CoA hydratase n=3 Tax=Paraburkholderia TaxID=1822464 RepID=A0A149PC34_9BURK) HSP 1 Score: 160 bits (406), Expect = 2.350e-46 Identity = 80/164 (48.78%), Postives = 109/164 (66.46%), Query Frame = 1
Query: 1 RELVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGSDVKEMAGASMDERLHIAQRKAMLMRALAELDRPVVCAVHGFALGGGFMLAIGCDVVVTATDAAWRLPEVELGFFPPWGIEALVRRVGIARARWLVWGTHPLTGSEALRLGLAE 492
R+L L+R E RNALD + L ++ A DP +R ++L G FC+GSD+KE+A S+ + A + R++A + +PV+ AV GFALGGGF+LAI CD+VV+ATD W LPEV G+ PPWG++AL+ RVG RAR L W P+TG EA RLG+A+
Sbjct: 15 RQLSLNRPERRNALDGGSIAELEQALQQADRDPQVRAVVLLGAPPAFCSGSDLKELATMSIQQMCDSESDTARVARSIAAMSKPVIAAVEGFALGGGFVLAISCDIVVSATDVRWHLPEVPNGWLPPWGLQALLARVGPVRARLLTWAADPMTGVEAHRLGVAD 178 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57872.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57872.1.1 >prot_P-wetherbeei_contig57872.1.1 ID=prot_P-wetherbeei_contig57872.1.1|Name=mRNA_P-wetherbeei_contig57872.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp RELVLSRNEVRNALDLATTERLIHSIAAARDDPAIRVLLLRGDGAGFCAGback to top mRNA from alignment at P-wetherbeei_contig57872:3..506- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57872.1.1 ID=mRNA_P-wetherbeei_contig57872.1.1|Name=mRNA_P-wetherbeei_contig57872.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57872:3..506- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57872:3..506- >mRNA_P-wetherbeei_contig57872.1.1 ID=mRNA_P-wetherbeei_contig57872.1.1|Name=mRNA_P-wetherbeei_contig57872.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57872:3..506- (Phaeothamnion wetherbeei SAG_119_79)back to top |