mRNA_P-wetherbeei_contig57816.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: A0A346A2M4_9HYPH (Dihydroorotase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A2M4_9HYPH) HSP 1 Score: 310 bits (795), Expect = 1.200e-102 Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
RAVL AI+RRAAFHSEDEYRLRERM LRVE DP SHPIWRDATAALMCTQRLI LARETGKRVHVLHVT+KDEAEFLAAHKDVATAEATP+HL+LFAPDCYERLGT AQLNPP+RDA H+ GLWHGL QGVID++GSDHSPHT+EEKSHPYPKTHSGM GVQTLVP+ML
Sbjct: 168 RAVLNAIHRRAAFHSEDEYRLRERMDLRVENDPRSHPIWRDATAALMCTQRLITLARETGKRVHVLHVTSKDEAEFLAAHKDVATAEATPAHLSLFAPDCYERLGTRAQLNPPIRDAVHQAGLWHGLQQGVIDSLGSDHSPHTVEEKSHPYPKTHSGMPGVQTLVPLML 336
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: A0A127ERT8_9HYPH (Dihydroorotase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ERT8_9HYPH) HSP 1 Score: 308 bits (790), Expect = 7.060e-102 Identity = 146/169 (86.39%), Postives = 159/169 (94.08%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
R VLKAI RRAAFHSEDEYRLRERM LRVEGDPSSHP+WRDATAALMCTQRL+ LARETGKRVHVLHVTTK+EA +LA HKDVA+ EATPSHLTL APDCY+RLGTLAQLNPP+RDA+HR+G+W GLAQGVIDT+GSDHSPHT EEK+HPYPKTHSGMTGVQTLVP+ML
Sbjct: 167 RNVLKAIRRRAAFHSEDEYRLRERMPLRVEGDPSSHPVWRDATAALMCTQRLVRLARETGKRVHVLHVTTKEEAAYLAEHKDVASCEATPSHLTLAAPDCYQRLGTLAQLNPPIRDASHRDGIWRGLAQGVIDTIGSDHSPHTREEKAHPYPKTHSGMTGVQTLVPVML 335
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: A0A371B3Z2_9HYPH (Dihydroorotase n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371B3Z2_9HYPH) HSP 1 Score: 294 bits (752), Expect = 3.910e-96 Identity = 137/169 (81.07%), Postives = 150/169 (88.76%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
RAVLK +NRR AFHSEDEYRLRERM R++ DP SHP+WRDA AALMCTQRL+ LARETGKR+HVLHVTTKDEAEFLA HKDVA+AE TP+H+TL APDCYERLGTLAQLNPPVRDA H+ GLWH L QG+IDT GSDHSPHT EEK+HPYPK HSGM GVQTLVP+ML
Sbjct: 168 RAVLKNVNRRVAFHSEDEYRLRERMSFRIDNDPRSHPVWRDAQAALMCTQRLVRLARETGKRIHVLHVTTKDEAEFLAGHKDVASAEVTPAHVTLTAPDCYERLGTLAQLNPPVRDAMHKAGLWHALQQGIIDTCGSDHSPHTREEKAHPYPKAHSGMPGVQTLVPLML 336
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: Q07IC1_RHOP5 (Dihydroorotase, multifunctional complex type n=1 Tax=Rhodopseudomonas palustris (strain BisA53) TaxID=316055 RepID=Q07IC1_RHOP5) HSP 1 Score: 272 bits (695), Expect = 1.520e-87 Identity = 123/169 (72.78%), Postives = 145/169 (85.80%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
R +L INRRAAFH+EDEYRL +R LR+EGDP SHP+WRD AAL+ TQRL+ LARE GKR+HVLH++TKDE EFL HKDVAT E TP HLTL AP+CYERLGTLAQ+NPPVRDA HR+GLWHG+AQG++D +GSDH+PHTLEEK+ PYP + SGMTGVQTLVP++L
Sbjct: 168 RKILAVINRRAAFHAEDEYRLNDRKGLRIEGDPRSHPVWRDEVAALLATQRLVKLAREAGKRIHVLHISTKDEIEFLRDHKDVATCEVTPHHLTLAAPECYERLGTLAQMNPPVRDAVHRDGLWHGIAQGIVDVIGSDHAPHTLEEKAKPYPASPSGMTGVQTLVPLLL 336
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: Q20YD3_RHOPB (Dihydroorotase, multifunctional complex type n=4 Tax=Rhodopseudomonas TaxID=1073 RepID=Q20YD3_RHOPB) HSP 1 Score: 270 bits (690), Expect = 8.650e-87 Identity = 125/169 (73.96%), Postives = 145/169 (85.80%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
R +L+ I RRAAFH+EDEYRL +R LR+EGDP SHP+WRD AAL TQRL+ALARETGKR+HVLHV+TK E EFL HKDVA+ E TP HLTL APDCYERLGTLAQ+NPPVRDAAHR+G+WHG+AQG++D +GSDH+PHTLEEKS YP + SGMTGVQTLVP+ML
Sbjct: 168 RKILQVIQRRAAFHAEDEYRLNDRKALRIEGDPRSHPVWRDEIAALTATQRLVALARETGKRIHVLHVSTKQEIEFLREHKDVASVEVTPHHLTLAAPDCYERLGTLAQMNPPVRDAAHRDGIWHGVAQGIVDVLGSDHAPHTLEEKSKTYPASPSGMTGVQTLVPLML 336
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: UPI001991ADB3 (Dihydroorotase n=1 Tax=Tardiphaga sp. TaxID=1926292 RepID=UPI001991ADB3) HSP 1 Score: 268 bits (686), Expect = 3.470e-86 Identity = 122/169 (72.19%), Postives = 146/169 (86.39%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
R + + I RRAAFH+EDEYRL ER HLR+EGDP SHP+WRD TAAL TQRL+ALA ETGKR+HVLH++TK+E EFL HKDVA+ EATP HLTL AP+CYERLGTLAQ+NPPVRDA+HR+G+W+G+AQG+ID +GSDH+PHTL+EK YP + SGMTGVQTLVP+ML
Sbjct: 168 RRIFQVIKRRAAFHAEDEYRLNERKHLRIEGDPRSHPVWRDETAALQATQRLVALAHETGKRIHVLHISTKEEIEFLRDHKDVASCEATPHHLTLTAPECYERLGTLAQMNPPVRDASHRDGIWNGIAQGIIDVLGSDHAPHTLQEKDKVYPASPSGMTGVQTLVPVML 336
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: A0A1Q4BZP6_9HYPH (Dihydroorotase n=1 Tax=Rhizobiales bacterium 62-47 TaxID=1895811 RepID=A0A1Q4BZP6_9HYPH) HSP 1 Score: 266 bits (681), Expect = 1.970e-85 Identity = 120/169 (71.01%), Postives = 146/169 (86.39%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
R +L I RRA+FH+EDEYRL ER HLR+EGDP SHP+WRD TAAL TQRL+A+ARETG R+HVLH++TK+E EFL HKDVA+ EATP HLTL AP+CYE+LGT AQ+NPPVRDA+HREG+W+G+AQG++D +GSDH+PHTLEEK+ YP + SGMTGVQTLVP+ML
Sbjct: 168 RRILSVIRRRASFHAEDEYRLNERKHLRIEGDPRSHPVWRDETAALQATQRLVAIARETGARIHVLHISTKEEIEFLRDHKDVASCEATPHHLTLAAPECYEQLGTRAQMNPPVRDASHREGIWYGIAQGIVDVLGSDHAPHTLEEKAKTYPASPSGMTGVQTLVPVML 336
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: UPI00131C44FE (dihydroorotase n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI00131C44FE) HSP 1 Score: 264 bits (675), Expect = 1.580e-84 Identity = 123/169 (72.78%), Postives = 142/169 (84.02%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
R + K I RRAAFH+EDEYRL ER LR+EGDP SHP+WRD AAL+ TQRL+ALARETGKR+HVLH++TK E EFL HKDVA+ EATP HLTL AP+CYERLGTLAQ+NPPVR A HREG+W G+ QG+ID +GSDH+PHTLEEKS YP + SGMTGVQTLVP+ML
Sbjct: 168 RRIFKVIQRRAAFHAEDEYRLNERKPLRIEGDPRSHPVWRDEPAALIATQRLVALARETGKRIHVLHISTKQEIEFLRDHKDVASCEATPHHLTLVAPECYERLGTLAQMNPPVRSADHREGIWRGIEQGIIDVLGSDHAPHTLEEKSKTYPASPSGMTGVQTLVPVML 336
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: A0A3S0DF28_9BRAD (Dihydroorotase n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A3S0DF28_9BRAD) HSP 1 Score: 264 bits (674), Expect = 2.230e-84 Identity = 120/169 (71.01%), Postives = 143/169 (84.62%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
R + + I RRAAFH+EDEYRL +R HLR+EGDP SHP+WRD AALM TQRL+ALARETGKR+HVLH++TK+E E+L HKDVAT EATP HLTL P+ YERLGT AQ+NPPVRDA+HREG+W G+ QG++D +GSDH+PHTLEEKS YP + SGMTGVQTLVP+ML
Sbjct: 168 RRIFEVIRRRAAFHAEDEYRLNDRKHLRIEGDPRSHPVWRDEIAALMATQRLVALARETGKRIHVLHISTKEEIEYLREHKDVATCEATPHHLTLAGPEAYERLGTKAQMNPPVRDASHREGIWRGIEQGIVDVLGSDHAPHTLEEKSKTYPASPSGMTGVQTLVPVML 336
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Match: A0A6L5FLN2_9HYPH (Dihydroorotase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FLN2_9HYPH) HSP 1 Score: 263 bits (671), Expect = 6.870e-84 Identity = 124/169 (73.37%), Postives = 140/169 (82.84%), Query Frame = 1
Query: 1 RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQRLIALARETGKRVHVLHVTTKDEAEFLAAHKDVATAEATPSHLTLFAPDCYERLGTLAQLNPPVRDAAHREGLWHGLAQGVIDTVGSDHSPHTLEEKSHPYPKTHSGMTGVQTLVPIML 507
R +L+ I RRA+FHSEDE RLRER HLR+EGDP SHP+WRD AAL CT RL+ LARETGKRVHVLHVTT E L AHKDVA+ E TP HLT+ AP+CYERLG LAQ+NPPVRDAAHR LWHGLAQGV+D +GSDH+PHT EEK+ PYP + SGMTGVQTLVP+ML
Sbjct: 168 RNILRVIRRRASFHSEDEPRLRERRHLRIEGDPRSHPVWRDEDAALTCTTRLVRLARETGKRVHVLHVTTAREMALLRAHKDVASVEVTPHHLTMTAPECYERLGALAQMNPPVRDAAHRAALWHGLAQGVVDVLGSDHAPHTREEKAKPYPASPSGMTGVQTLVPLML 336 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57816.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57816.1.1 >prot_P-wetherbeei_contig57816.1.1 ID=prot_P-wetherbeei_contig57816.1.1|Name=mRNA_P-wetherbeei_contig57816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp RAVLKAINRRAAFHSEDEYRLRERMHLRVEGDPSSHPIWRDATAALMCTQback to top mRNA from alignment at P-wetherbeei_contig57816:3..509- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57816.1.1 ID=mRNA_P-wetherbeei_contig57816.1.1|Name=mRNA_P-wetherbeei_contig57816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57816:3..509- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57816:3..509- >mRNA_P-wetherbeei_contig57816.1.1 ID=mRNA_P-wetherbeei_contig57816.1.1|Name=mRNA_P-wetherbeei_contig57816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57816:3..509- (Phaeothamnion wetherbeei SAG_119_79)back to top |