mRNA_P-wetherbeei_contig575.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A835YJ61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ61_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.340e-34 Identity = 151/413 (36.56%), Postives = 182/413 (44.07%), Query Frame = 1
Query: 7 CIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGR-----------------LTAGNG---------RDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADWVAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPELSRYRCAICTVQ--------------------------------------RDVCRRCFTDLR--VGAMCIEQNHAFVTARAGGGERSAWQSAPFPPCSSISDAGSRYRGGGSASQLRWLRPLQAQRPSPQLLALQGRELSTDDYDLLLQLDIRGGAARPLHQHLLAMLP 1047
C+H L+ +KVLRVP+D+PL+WQ SL+DSEI+ +L+G L G+G R GGSG G D G +V R + GEVC +CQEGM G LTYC GCG N+H RCMR+YAEHRRS Q VTC LCRADW P+ R XXX XXXXXXXXXXXXXXXXXXX +A C C + + A T RD+C RC+ +R A C+ H FV A AGG E W + P P ++ G+ GG LLALQGRE++ DYD LL LD G PLH+HLLA LP
Sbjct: 68 CVHALYVMIKVLRVPQDHPLSWQLSLVDSEIDTILSGWVAKQPRQAPARAAAAQFLKKGSGHTAAEAAAPRGKSGGSGSGADDXXXXXXXXXXXXXESGKGGDG-------AVVRLEVMPGEVCPICQEGMEGAP----EELTYCRRGCGNNMHVRCMRVYAEHRRSSAQDVTCCLCRADW-GPLAL-RELKTAEKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAFYRCLHCSGXXXXXXAGHGGAGRTPHSLDGAAAAQWPGGEGDPLLSPLQGGGGRGRGMGGSSCARDLCERCYETMRGAANARCLSGRHVFVMAAAGG-EAPVW-AVPKRPPGGVAGLGAGGAGG--------------------LLALQGREITAADYDALLALDDSGA---PLHEHLLAALP 442
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: F0W5J6_9STRA (Uncharacterized protein AlNc14C21G2161 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5J6_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.310e-26 Identity = 104/354 (29.38%), Postives = 146/354 (41.24%), Query Frame = 1
Query: 4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLT--AGNGRDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW----VAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPELSRYRCAICTVQRDVCRRCFTDLRVGAMCIEQNHAFVTARAGGGERSAWQSAPFPPCSSISDAGSRYRGGGSASQLRWLRPLQAQRPSPQLLALQGRELSTDDYDLLLQLDIRGGAARPLHQHLLAMLP 1047
+CIH LF +KVLRVP++ P+ WQ SL+DSEI++VL G AG S H FL++ S +V R + GEVC++CQE M + LT+C GCG N H CMR++ E R+ ++ + CPLCR DW + + KE T C C +T + YRC C ++C RC+ + H FVT P+ P YR +P ++ R S + LQGRE+ST+DY+LLLQLD LH +L+++LP
Sbjct: 66 ICIHILFVMLKVLRVPQEMPILWQKSLIDSEIDLVLRGEYKHKAGCNHTS-----------HIFLKKKT---------IESILSTESENVERHDIVQGEVCAICQEEMLATE-----PLTFCRKGCGNNFHIECMRVFGESRKQSKESIICPLCRKDWGQHSLTELRKEENKANRKSNVHKNTC------------------------------CKKC-ATKPIRVQLYRCVRCK-NVNLCERCYKST------VHPKHHFVTKTNVAD--------PWDPA---------YRN---------CQPRKSNRES--VSRLQGREISTNDYELLLQLDSH--ELDTLHHYLVSILP 326
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A7S1C5V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5V7_9STRA) HSP 1 Score: 112 bits (280), Expect = 9.680e-24 Identity = 113/363 (31.13%), Postives = 148/363 (40.77%), Query Frame = 1
Query: 4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGR---------------DSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADWVAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPELS-RYRCAICTVQRDVCRRCFTDLRVGAMCIEQNHAFVTARAGGGERSAWQSAPFPPCSSISDAGSRYRGGGSASQLRWLRPLQAQRPSPQLLALQGRELSTDDYDLLLQLDIRGGAARPLHQHLLAML 1044
+C H LF +KVLRVP D+P WQ SL DSE+E + R R G A XXXXXX V+++ L+ GEVC +CQ+ M D+ L +C CG N+H RCMRM+AE + + V CPLCR DW P + + S + CA C++T P R+RC C D+C RCF R G ++H FVT GG AW A G R +A+ L +P+L ALQGRE++ DDY++LL LD R L QHL+ L
Sbjct: 149 ICYHILFVMLKVLRVPPDDPRVWQLSLTDSEVEACIKQRFALQEARRXXXXXXXXXXXXXXXXXXXXXPGAASXXXXXXXTGAADLRSXXXXXXXXXSGDEGVTQRALAEGEVCPICQDDMTVDE-----VLAFCKS-CGNNVHNRCMRMWAEESVAQEKPVRCPLCREDW-GPAALDDLARNRTEAKKQRQAS----------------------SVHHGVACAGCKTT--PIYGKRHRCLFCD-DVDLCARCFNRGRHG----RRSHGFVTRERSGG---AWLPAVRQ--------GHEERAAAAAAAL-----------APELAALQGREITDDDYEMLLALD-RAAHGPTLVQHLMECL 452
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A7S1WBF6_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WBF6_ALECA) HSP 1 Score: 103 bits (257), Expect = 3.780e-22 Identity = 58/164 (35.37%), Postives = 86/164 (52.44%), Query Frame = 1
Query: 7 CIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAA---------LTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW 471
C+H F +KVL+VP DNPL WQ SL D+EI VLA R R + + + R +AK G+ G + S +R P+ G+ C +C + + DD E + LT+C CG +H++CM+++AEHR S ++++CPLCRA W
Sbjct: 65 CVHTAFVLLKVLKVPPDNPLCWQPSLTDAEIGEVLAARQREEEKRKK--------EAERAERRAAIEAKRQGKKGESKPDQPAEES-NRVPIEDGDTCPICCDDLLPDDAREEGSKANKSAMRLLTFCKIACGRTIHSKCMKVWAEHRMSTGEEISCPLCRAKW 219
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A0G4J5U2_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J5U2_PLABS) HSP 1 Score: 104 bits (259), Expect = 4.560e-21 Identity = 63/157 (40.13%), Postives = 83/157 (52.87%), Query Frame = 1
Query: 4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSGGGSGDGGDGKHSFLR-RDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGM-AGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRAD 468
LCIH LF +KVLRVP DNPLAWQ SLLDSE+ +LAG KH + R A + AG G V ++PL + C +C + M G D L+YC CG + H RC+++YA+H++S ++ VTCPLCR D
Sbjct: 67 LCIHLLFVMIKVLRVPADNPLAWQRSLLDSEVSQILAG--------------------KHLRMSARTAPPRPAGPHGTR---------VLQRPLDDDDSCPICMDQMHPGQD------LSYCRSSCGNSFHLRCIQVYAQHKQSMKEPVTCPLCRTD 188
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: D8LDM8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM8_ECTSI) HSP 1 Score: 101 bits (251), Expect = 1.400e-20 Identity = 82/192 (42.71%), Postives = 96/192 (50.00%), Query Frame = 1
Query: 1 RLCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSG---GGSGDG-----GDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVS----------------RQPLSLGEVCSVCQEGM-----AGDDCGEHAA------LTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW 471
R+CI KVL+VP NPLAWQT+L+DSE++ +L+ G G D G G S G G FLRR XXXXXXX R ++ GEVC VCQE M G++ G+ A LTYC GCG N+HARCM MYAEHRRS K CPLCRADW
Sbjct: 7 RVCIFPRTVDPKVLKVPPSNPLAWQTALIDSEVDYILS-----GGGGDKGRKHGASAPGAARPQGQQPREFLRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPRLEIAPGEVCPVCQEEMDEGGGEGENDGKVVAAEGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRADW 193
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A7S4CI79_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CI79_9EUGL) HSP 1 Score: 95.9 bits (237), Expect = 1.580e-19 Identity = 58/156 (37.18%), Postives = 76/156 (48.72%), Query Frame = 1
Query: 4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW 471
LCIH LF +K+ R+P NP+ WQ SLLD EI +L GRL D K K A S SS V R+ + +VC +C + M DD L YC GCG N+HA CM+++A H + +TCP+CRA+W
Sbjct: 67 LCIHILFVMLKIYRIPPTNPVVWQQSLLDDEITQILTGRLQR--------------------QASDDKPKPAASS---------SSGVERRAVD--DVCPICYDDMNEDD-----LLVYCKTGCGNNIHAACMKIWAGHHKD---HLTCPMCRAEW 183
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A2R5GM31_9STRA (E3 ubiquitin-protein ligase Zswim2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GM31_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.530e-19 Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = 1
Query: 7 CIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSG-----GGSGDGGDGKHSFLRR---DAKAKAAGRSGXXXXXXX----------SSSSVSRQPLSLGEVCSVCQEGMAGDD-----CGEHAA--LTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRA 465
CIH LF KVLRVP DNPLAWQ SL + EI VL+ R T+ + D+G G + G K +FL++ + + ++ R+ S VS++ + GEVC +CQE + D +HA LTYC GCG ++H +CM+++A+HR S ++V+CPLCR+
Sbjct: 81 CIHLLFVMTKVLRVPADNPLAWQASLAEREINEVLSFRPTSTHA-DAGSKAKVGAVANAGSKKKTFLKKRSGERRLESLARNKTSFLDVMDEELDGDDTSSQREVSQKHIEEGEVCPICQEDLPTDSEEHDSQAKHAKQNLTYCRFGCGNSVHIKCMKVWADHRSSVGEEVSCPLCRS 257
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A7S0E3I3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E3I3_9CRYP) HSP 1 Score: 99.0 bits (245), Expect = 5.000e-19 Identity = 80/270 (29.63%), Postives = 123/270 (45.56%), Query Frame = 1
Query: 256 SSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW----VAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPEL-SRYRCAICTVQRDVCRRCFTDLRVGAMCIEQNHAFVTARAGGGERSAWQSAPFPPCSSISDAGSRYRGGGSASQLRWLRPLQAQRPSPQLLA-LQGRELSTDDYDLLLQLDIRGGAARPLHQHLLAMLP 1047
S+ V ++P+ G+VC +CQE ++G LTYC GCG ++H RCM+++ EH+ S R+ ++CPLCR DW +A + ++ ++C+ CR+ P + +RYRC +C D+C CF A ++H FV + + AP+ P S R RG G +++ QL+ LQ R+L+ DDYD+LLQLD G LH+HL+ LP
Sbjct: 147 SAEVEQKPVQDGDVCVICQEDLSGG----REPLTYCRRGCGNSVHVRCMKVWGEHKSSQREGISCPLCREDWGPDALAVLARDLRPPRRPSNLHHG------------------------------VSCSRCRAL--PVVGTRYRCLLCE-DLDLCSSCF------AHDAHRHHPFV--------KQELRDAPWAPAS-------RRRGDGGEGRIQ-----------QQLMQQLQSRDLTEDDYDVLLQLDSVNGLVS-LHEHLVQSLP 346
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A0S4KHN3_BODSA (Zinc finger protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4KHN3_BODSA) HSP 1 Score: 95.5 bits (236), Expect = 9.150e-18 Identity = 71/239 (29.71%), Postives = 100/239 (41.84%), Query Frame = 1
Query: 4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADWVAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPELSRYRCAICTVQRDVCRRCF 720
LC+H LF +V RVP DNPL WQ SLL++E++ ++ G ++ N R G G+G +D A+ G G V R+P+ + C +C DD E AL YC GCG N+H+ C + YA H + + CPLCR W P+ E + + C+ CR + RY+CA CT D+C CF
Sbjct: 68 LCLHILFVLSRVFRVPADNPLVWQRSLLEAEVDQLIRGHISKVNQRRRRQGGGNG--------PQDPTAEC-GPDGRLV--------VPRRPVEEDDTCPICC-----DDIHEDRALVYCRFGCGNNIHSACFKQYATHNSTNPSPLLCPLCREQW-GPLGVE--------------------------------------GAAHNVACSDCRGPINGD--RYKCAFCT-SYDLCSSCF 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig575.2.1 >prot_P-wetherbeei_contig575.2.1 ID=prot_P-wetherbeei_contig575.2.1|Name=mRNA_P-wetherbeei_contig575.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=381bp RLCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSGback to top mRNA from alignment at P-wetherbeei_contig575:6745..8775+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig575.2.1 ID=mRNA_P-wetherbeei_contig575.2.1|Name=mRNA_P-wetherbeei_contig575.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2031bp|location=Sequence derived from alignment at P-wetherbeei_contig575:6745..8775+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig575:6745..8775+ >mRNA_P-wetherbeei_contig575.2.1 ID=mRNA_P-wetherbeei_contig575.2.1|Name=mRNA_P-wetherbeei_contig575.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1143bp|location=Sequence derived from alignment at P-wetherbeei_contig575:6745..8775+ (Phaeothamnion wetherbeei SAG_119_79)back to top |