mRNA_P-wetherbeei_contig575.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig575.2.1
Unique NamemRNA_P-wetherbeei_contig575.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A835YJ61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ61_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.340e-34
Identity = 151/413 (36.56%), Postives = 182/413 (44.07%), Query Frame = 1
Query:    7 CIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGR-----------------LTAGNG---------RDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADWVAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPELSRYRCAICTVQ--------------------------------------RDVCRRCFTDLR--VGAMCIEQNHAFVTARAGGGERSAWQSAPFPPCSSISDAGSRYRGGGSASQLRWLRPLQAQRPSPQLLALQGRELSTDDYDLLLQLDIRGGAARPLHQHLLAMLP 1047
            C+H L+  +KVLRVP+D+PL+WQ SL+DSEI+ +L+G                  L  G+G         R   GGSG G D                  G          +V R  +  GEVC +CQEGM G        LTYC  GCG N+H RCMR+YAEHRRS  Q VTC LCRADW  P+   R         XXX    XXXXXXXXXXXXXXXXXXX    +A   C  C        + +  A  T                                        RD+C RC+  +R    A C+   H FV A AGG E   W + P  P   ++  G+   GG                    LLALQGRE++  DYD LL LD  G    PLH+HLLA LP
Sbjct:   68 CVHALYVMIKVLRVPQDHPLSWQLSLVDSEIDTILSGWVAKQPRQAPARAAAAQFLKKGSGHTAAEAAAPRGKSGGSGSGADDXXXXXXXXXXXXXESGKGGDG-------AVVRLEVMPGEVCPICQEGMEGAP----EELTYCRRGCGNNMHVRCMRVYAEHRRSSAQDVTCCLCRADW-GPLAL-RELKTAEKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAFYRCLHCSGXXXXXXAGHGGAGRTPHSLDGAAAAQWPGGEGDPLLSPLQGGGGRGRGMGGSSCARDLCERCYETMRGAANARCLSGRHVFVMAAAGG-EAPVW-AVPKRPPGGVAGLGAGGAGG--------------------LLALQGREITAADYDALLALDDSGA---PLHEHLLAALP 442          
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: F0W5J6_9STRA (Uncharacterized protein AlNc14C21G2161 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5J6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.310e-26
Identity = 104/354 (29.38%), Postives = 146/354 (41.24%), Query Frame = 1
Query:    4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLT--AGNGRDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW----VAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPELSRYRCAICTVQRDVCRRCFTDLRVGAMCIEQNHAFVTARAGGGERSAWQSAPFPPCSSISDAGSRYRGGGSASQLRWLRPLQAQRPSPQLLALQGRELSTDDYDLLLQLDIRGGAARPLHQHLLAMLP 1047
            +CIH LF  +KVLRVP++ P+ WQ SL+DSEI++VL G     AG    S           H FL++                   S +V R  +  GEVC++CQE M   +      LT+C  GCG N H  CMR++ E R+  ++ + CPLCR DW    +  + KE             T                               C  C +T    +  YRC  C    ++C RC+         +   H FVT              P+ P          YR           +P ++ R S  +  LQGRE+ST+DY+LLLQLD        LH +L+++LP
Sbjct:   66 ICIHILFVMLKVLRVPQEMPILWQKSLIDSEIDLVLRGEYKHKAGCNHTS-----------HIFLKKKT---------IESILSTESENVERHDIVQGEVCAICQEEMLATE-----PLTFCRKGCGNNFHIECMRVFGESRKQSKESIICPLCRKDWGQHSLTELRKEENKANRKSNVHKNTC------------------------------CKKC-ATKPIRVQLYRCVRCK-NVNLCERCYKST------VHPKHHFVTKTNVAD--------PWDPA---------YRN---------CQPRKSNRES--VSRLQGREISTNDYELLLQLDSH--ELDTLHHYLVSILP 326          
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A7S1C5V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5V7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 9.680e-24
Identity = 113/363 (31.13%), Postives = 148/363 (40.77%), Query Frame = 1
Query:    4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGR---------------DSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADWVAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPELS-RYRCAICTVQRDVCRRCFTDLRVGAMCIEQNHAFVTARAGGGERSAWQSAPFPPCSSISDAGSRYRGGGSASQLRWLRPLQAQRPSPQLLALQGRELSTDDYDLLLQLDIRGGAARPLHQHLLAML 1044
            +C H LF  +KVLRVP D+P  WQ SL DSE+E  +  R      R                       G             A       XXXXXX     V+++ L+ GEVC +CQ+ M  D+      L +C   CG N+H RCMRM+AE   +  + V CPLCR DW  P   +               +                      S    + CA C++T  P    R+RC  C    D+C RCF   R G     ++H FVT    GG   AW  A           G   R   +A+ L           +P+L ALQGRE++ DDY++LL LD R      L QHL+  L
Sbjct:  149 ICYHILFVMLKVLRVPPDDPRVWQLSLTDSEVEACIKQRFALQEARRXXXXXXXXXXXXXXXXXXXXXPGAASXXXXXXXTGAADLRSXXXXXXXXXSGDEGVTQRALAEGEVCPICQDDMTVDE-----VLAFCKS-CGNNVHNRCMRMWAEESVAQEKPVRCPLCREDW-GPAALDDLARNRTEAKKQRQAS----------------------SVHHGVACAGCKTT--PIYGKRHRCLFCD-DVDLCARCFNRGRHG----RRSHGFVTRERSGG---AWLPAVRQ--------GHEERAAAAAAAL-----------APELAALQGREITDDDYEMLLALD-RAAHGPTLVQHLMECL 452          
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A7S1WBF6_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WBF6_ALECA)

HSP 1 Score: 103 bits (257), Expect = 3.780e-22
Identity = 58/164 (35.37%), Postives = 86/164 (52.44%), Query Frame = 1
Query:    7 CIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAA---------LTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW 471
            C+H  F  +KVL+VP DNPL WQ SL D+EI  VLA R      R          + + +  R   +AK  G+ G       +  S +R P+  G+ C +C + +  DD  E  +         LT+C   CG  +H++CM+++AEHR S  ++++CPLCRA W
Sbjct:   65 CVHTAFVLLKVLKVPPDNPLCWQPSLTDAEIGEVLAARQREEEKRKK--------EAERAERRAAIEAKRQGKKGESKPDQPAEES-NRVPIEDGDTCPICCDDLLPDDAREEGSKANKSAMRLLTFCKIACGRTIHSKCMKVWAEHRMSTGEEISCPLCRAKW 219          
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A0G4J5U2_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J5U2_PLABS)

HSP 1 Score: 104 bits (259), Expect = 4.560e-21
Identity = 63/157 (40.13%), Postives = 83/157 (52.87%), Query Frame = 1
Query:    4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSGGGSGDGGDGKHSFLR-RDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGM-AGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRAD 468
            LCIH LF  +KVLRVP DNPLAWQ SLLDSE+  +LAG                    KH  +  R A  + AG  G           V ++PL   + C +C + M  G D      L+YC   CG + H RC+++YA+H++S ++ VTCPLCR D
Sbjct:   67 LCIHLLFVMIKVLRVPADNPLAWQRSLLDSEVSQILAG--------------------KHLRMSARTAPPRPAGPHGTR---------VLQRPLDDDDSCPICMDQMHPGQD------LSYCRSSCGNSFHLRCIQVYAQHKQSMKEPVTCPLCRTD 188          
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: D8LDM8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM8_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.400e-20
Identity = 82/192 (42.71%), Postives = 96/192 (50.00%), Query Frame = 1
Query:    1 RLCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSG---GGSGDG-----GDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVS----------------RQPLSLGEVCSVCQEGM-----AGDDCGEHAA------LTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW 471
            R+CI       KVL+VP  NPLAWQT+L+DSE++ +L+     G G D G   G S  G     G     FLRR           XXXXXXX                      R  ++ GEVC VCQE M      G++ G+  A      LTYC  GCG N+HARCM MYAEHRRS   K  CPLCRADW
Sbjct:    7 RVCIFPRTVDPKVLKVPPSNPLAWQTALIDSEVDYILS-----GGGGDKGRKHGASAPGAARPQGQQPREFLRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPRLEIAPGEVCPVCQEEMDEGGGEGENDGKVVAAEGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRADW 193          
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A7S4CI79_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CI79_9EUGL)

HSP 1 Score: 95.9 bits (237), Expect = 1.580e-19
Identity = 58/156 (37.18%), Postives = 76/156 (48.72%), Query Frame = 1
Query:    4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW 471
            LCIH LF  +K+ R+P  NP+ WQ SLLD EI  +L GRL                         D K K A  S         SS V R+ +   +VC +C + M  DD      L YC  GCG N+HA CM+++A H +     +TCP+CRA+W
Sbjct:   67 LCIHILFVMLKIYRIPPTNPVVWQQSLLDDEITQILTGRLQR--------------------QASDDKPKPAASS---------SSGVERRAVD--DVCPICYDDMNEDD-----LLVYCKTGCGNNIHAACMKIWAGHHKD---HLTCPMCRAEW 183          
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A2R5GM31_9STRA (E3 ubiquitin-protein ligase Zswim2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GM31_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.530e-19
Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = 1
Query:    7 CIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSG-----GGSGDGGDGKHSFLRR---DAKAKAAGRSGXXXXXXX----------SSSSVSRQPLSLGEVCSVCQEGMAGDD-----CGEHAA--LTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRA 465
            CIH LF   KVLRVP DNPLAWQ SL + EI  VL+ R T+ +  D+G     G   + G  K +FL++   + + ++  R+                  S   VS++ +  GEVC +CQE +  D        +HA   LTYC  GCG ++H +CM+++A+HR S  ++V+CPLCR+
Sbjct:   81 CIHLLFVMTKVLRVPADNPLAWQASLAEREINEVLSFRPTSTHA-DAGSKAKVGAVANAGSKKKTFLKKRSGERRLESLARNKTSFLDVMDEELDGDDTSSQREVSQKHIEEGEVCPICQEDLPTDSEEHDSQAKHAKQNLTYCRFGCGNSVHIKCMKVWADHRSSVGEEVSCPLCRS 257          
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A7S0E3I3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E3I3_9CRYP)

HSP 1 Score: 99.0 bits (245), Expect = 5.000e-19
Identity = 80/270 (29.63%), Postives = 123/270 (45.56%), Query Frame = 1
Query:  256 SSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADW----VAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPEL-SRYRCAICTVQRDVCRRCFTDLRVGAMCIEQNHAFVTARAGGGERSAWQSAPFPPCSSISDAGSRYRGGGSASQLRWLRPLQAQRPSPQLLA-LQGRELSTDDYDLLLQLDIRGGAARPLHQHLLAMLP 1047
            S+ V ++P+  G+VC +CQE ++G        LTYC  GCG ++H RCM+++ EH+ S R+ ++CPLCR DW    +A + ++                                           ++C+ CR+   P + +RYRC +C    D+C  CF      A    ++H FV        +   + AP+ P S       R RG G   +++            QL+  LQ R+L+ DDYD+LLQLD   G    LH+HL+  LP
Sbjct:  147 SAEVEQKPVQDGDVCVICQEDLSGG----REPLTYCRRGCGNSVHVRCMKVWGEHKSSQREGISCPLCREDWGPDALAVLARDLRPPRRPSNLHHG------------------------------VSCSRCRAL--PVVGTRYRCLLCE-DLDLCSSCF------AHDAHRHHPFV--------KQELRDAPWAPAS-------RRRGDGGEGRIQ-----------QQLMQQLQSRDLTEDDYDVLLQLDSVNGLVS-LHEHLVQSLP 346          
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Match: A0A0S4KHN3_BODSA (Zinc finger protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4KHN3_BODSA)

HSP 1 Score: 95.5 bits (236), Expect = 9.150e-18
Identity = 71/239 (29.71%), Postives = 100/239 (41.84%), Query Frame = 1
Query:    4 LCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSGGGSGDGGDGKHSFLRRDAKAKAAGRSGXXXXXXXSSSSVSRQPLSLGEVCSVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTCPLCRADWVAPVEKERXXXXXXXXXXXXTVADXXXXXXXXXXXXXXXXXXXVVSSDAEMNCASCRSTFAPELSRYRCAICTVQRDVCRRCF 720
            LC+H LF   +V RVP DNPL WQ SLL++E++ ++ G ++  N R    G G+G         +D  A+  G  G           V R+P+   + C +C      DD  E  AL YC  GCG N+H+ C + YA H  +    + CPLCR  W  P+  E                                       +   + C+ CR     +  RY+CA CT   D+C  CF
Sbjct:   68 LCLHILFVLSRVFRVPADNPLVWQRSLLEAEVDQLIRGHISKVNQRRRRQGGGNG--------PQDPTAEC-GPDGRLV--------VPRRPVEEDDTCPICC-----DDIHEDRALVYCRFGCGNNIHSACFKQYATHNSTNPSPLLCPLCREQW-GPLGVE--------------------------------------GAAHNVACSDCRGPINGD--RYKCAFCT-SYDLCSSCF 242          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig575.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJ61_9STRA1.340e-3436.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0W5J6_9STRA1.310e-2629.38Uncharacterized protein AlNc14C21G2161 n=1 Tax=Alb... [more]
A0A7S1C5V7_9STRA9.680e-2431.13Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S1WBF6_ALECA3.780e-2235.37Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A0G4J5U2_PLABS4.560e-2140.13Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
D8LDM8_ECTSI1.400e-2042.71RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S4CI79_9EUGL1.580e-1937.18Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A2R5GM31_9STRA2.530e-1937.64E3 ubiquitin-protein ligase Zswim2 n=1 Tax=Hondaea... [more]
A0A7S0E3I3_9CRYP5.000e-1929.63Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A0S4KHN3_BODSA9.150e-1829.71Zinc finger protein, putative n=1 Tax=Bodo saltans... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig575contigP-wetherbeei_contig575:6745..8775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008613480.1
PFAMsSWIM,zf-RING_2
Model size1143
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000165,GO:0000186,GO:0000209,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004706,GO:0004709,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0007254,GO:0007256,GO:0007346,GO:0008150,GO:0008152,GO:0008289,GO:0008432,GO:0009056,GO:0009057,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010639,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016567,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019900,GO:0019901,GO:0019941,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030163,GO:0031098,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031434,GO:0032147,GO:0032231,GO:0032232,GO:0032268,GO:0032270,GO:0032446,GO:0032872,GO:0032874,GO:0032956,GO:0032970,GO:0033043,GO:0033554,GO:0033674,GO:0035556,GO:0036211,GO:0042325,GO:0042327,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043506,GO:0043507,GO:0043549,GO:0043632,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0045859,GO:0045860,GO:0045893,GO:0045935,GO:0045937,GO:0045944,GO:0046328,GO:0046330,GO:0046625,GO:0046777,GO:0046782,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0050434,GO:0050789,GO:0050790,GO:0050792,GO:0050794,GO:0050896,GO:0051019,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051338,GO:0051347,GO:0051403,GO:0051493,GO:0051494,GO:0051603,GO:0051716,GO:0051726,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070302,GO:0070304,GO:0070647,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0110053,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902531,GO:1902533,GO:1902680,GO:1902903,GO:1902904,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons2
Evalue2.44e-26
EggNOG OGs2AKTQ@1|root,2RZA9@2759|Eukaryota
DescriptionRing finger
Cds size1143
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186852.7875876-CDS-P-wetherbeei_contig575:6744..77991683186852.7875876-CDS-P-wetherbeei_contig575:6744..7799Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig575 6745..7799 +
1683186852.8023767-CDS-P-wetherbeei_contig575:8687..87751683186852.8023767-CDS-P-wetherbeei_contig575:8687..8775Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig575 8688..8775 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig575.2.1prot_P-wetherbeei_contig575.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig575 6745..8775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig575.2.1

>prot_P-wetherbeei_contig575.2.1 ID=prot_P-wetherbeei_contig575.2.1|Name=mRNA_P-wetherbeei_contig575.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=381bp
RLCIHHLFCFVKVLRVPEDNPLAWQTSLLDSEIEVVLAGRLTAGNGRDSG
GGSGDGGDGKHSFLRRDAKAKAAGRSGAGDSGTSSSSSVSRQPLSLGEVC
SVCQEGMAGDDCGEHAALTYCSGGCGGNLHARCMRMYAEHRRSGRQKVTC
PLCRADWVAPVEKERRRRRRRVRHHDGTVADRDETGDGNGIGSGSGGGGG
VVSSDAEMNCASCRSTFAPELSRYRCAICTVQRDVCRRCFTDLRVGAMCI
EQNHAFVTARAGGGERSAWQSAPFPPCSSISDAGSRYRGGGSASQLRWLR
PLQAQRPSPQLLALQGRELSTDDYDLLLQLDIRGGAARPLHQHLLAMLPS
HVGSGGGSSGSGGGSSGSGGGGVVVRAMQRR
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mRNA from alignment at P-wetherbeei_contig575:6745..8775+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig575.2.1 ID=mRNA_P-wetherbeei_contig575.2.1|Name=mRNA_P-wetherbeei_contig575.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2031bp|location=Sequence derived from alignment at P-wetherbeei_contig575:6745..8775+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCTTTGTATCCACCACCTCTTTTGCTTCGTCAAAGTTCTCCGCGTGCC GGAGGACAACCCACTTGCGTGGCAGACGTCCCTACTCGATTCAGAGATTG AAGTTGTGCTGGCGGGACGGCTGACTGCTGGCAACGGCCGGGACAGCGGC GGCGGTAGTGGTGACGGCGGCGACGGCAAGCATTCCTTTCTTCGCCGTGA CGCGAAGGCCAAGGCTGCTGGGCGGTCTGGAGCCGGCGATAGCGGCACTA GCAGCAGCAGCTCAGTGTCGCGGCAGCCGCTGTCGCTGGGAGAGGTCTGC TCCGTATGCCAGGAAGGAATGGCGGGCGACGACTGCGGGGAGCATGCGGC CTTGACTTACTGCAGCGGGGGATGCGGCGGGAACCTCCATGCCCGCTGCA TGCGCATGTATGCCGAGCACCGTCGGTCCGGCCGCCAAAAGGTCACCTGT CCACTGTGCCGTGCCGACTGGGTGGCTCCCGTGGAAAAGGAGAGGAGACG GAGGCGGCGGCGGGTACGGCATCACGACGGCACAGTGGCGGATCGCGACG AAACCGGCGATGGCAATGGCATCGGCAGCGGGAGCGGCGGCGGTGGCGGC GTCGTTAGCAGCGACGCTGAGATGAACTGCGCTTCTTGCCGTTCCACTTT TGCTCCGGAGCTTTCTCGCTACCGCTGTGCCATCTGCACCGTCCAACGAG ACGTCTGTCGCCGTTGCTTCACCGACTTGCGCGTCGGTGCTATGTGCATA GAGCAGAACCACGCGTTTGTGACGGCGCGCGCCGGCGGTGGCGAGCGCTC GGCCTGGCAGTCGGCGCCTTTCCCGCCGTGCAGCAGCATCAGTGACGCTG GCAGCAGATACCGCGGAGGTGGCAGCGCGTCGCAGTTACGGTGGTTACGG CCGCTGCAGGCGCAGCGGCCGTCGCCTCAGCTGCTGGCGCTGCAGGGGCG CGAGCTCAGTACGGACGACTATGACCTTCTCCTGCAGCTCGACATTCGGG GCGGCGCCGCCCGCCCGCTGCACCAGCACTTGCTGGCGATGCTGCCGTCT CACGTGTGCAGAGACGGTGGTAGCGTCGCGGGAAGGGCTGCCCCAGAAAG CACCTCCTTCACTGCTATAACGGCCGCCGCTGACAACAACGCCGCCGATG GTTCCGTAGGTGAAAGAGCTGCCACCTCAGCTGCGGCACATGAAGGCCCG ATGGCAGCCAGTGCACTTGCCGACGATGCTGCTGCTGCTGCTGCAGCCGC TAGCGCCGCTGCTGTTGCCACCGCCCAACTGGCGGAGACCAATGTCAGAA GCGAAGCCGTTTCTGCTGCACAATCAGCTTGGCCCGCTGCTCCGGGCATC GACCACAACGTCGGCAGCAGCGGTATGACCGCGCGGAACGACGCGGAGCC GTGCGCCTGTTGCGGCGGCTCGCTGAGCATCGCCACCGGGCCGGGCACCG TCCGATCCCTGCCTTGCCGGCACGGGGCGCACGAGGCGTGCCTCGTCCCG CTTCTCCTGGACGCAGCGGCCTCCGGACGGTGGGGAGCGTGCCGCTGCCC GCTGGACCAAGAGCTCCTCTTTCCGGGCCTGGCACCGCCGCGCCGACCGC CGCCGCCGCTCGAACAGCAGCAGCCGCCGCCATCGCTGCCGCAGCCAGCG GCGGCTAGCGCCCCCGACGGCGCGCCCCTGAACGTGGCGATCGTTGTGAT GCCGCTGAGGCAAGAGCAGGCTGACGGAGCGGCGGCGGCAGGAGCCGTGG CGGGAGTGGGCGGTCACATAAGGCGCGGTTTGCCCGCGTCTTCCTCTTCG GCGTCTAATGCCGGCGGCGCCGGCACGAGCGGCGGCGGTGGTGGCGGCGG CGGCGGCGGCAGGACGTTCAATTTCGCCGTGGCGGGGGCGGCGGTGACCG TCCTTGCCGGTTGCAGCGGCAGCGGCAGCGGCGGCGGCAGCAGTGGCAGC GGCGGCGGCAGCAGTGGCAGCGGCGGCGGCAGCAGTGGCAGCGGCGGCGG CGGCGTCGTCGTCCGAGCCATGCAGCGGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig575:6745..8775+

>mRNA_P-wetherbeei_contig575.2.1 ID=mRNA_P-wetherbeei_contig575.2.1|Name=mRNA_P-wetherbeei_contig575.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1143bp|location=Sequence derived from alignment at P-wetherbeei_contig575:6745..8775+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCTTTGTATCCACCACCTCTTTTGCTTCGTCAAAGTTCTCCGCGTGCC
GGAGGACAACCCACTTGCGTGGCAGACGTCCCTACTCGATTCAGAGATTG
AAGTTGTGCTGGCGGGACGGCTGACTGCTGGCAACGGCCGGGACAGCGGC
GGCGGTAGTGGTGACGGCGGCGACGGCAAGCATTCCTTTCTTCGCCGTGA
CGCGAAGGCCAAGGCTGCTGGGCGGTCTGGAGCCGGCGATAGCGGCACTA
GCAGCAGCAGCTCAGTGTCGCGGCAGCCGCTGTCGCTGGGAGAGGTCTGC
TCCGTATGCCAGGAAGGAATGGCGGGCGACGACTGCGGGGAGCATGCGGC
CTTGACTTACTGCAGCGGGGGATGCGGCGGGAACCTCCATGCCCGCTGCA
TGCGCATGTATGCCGAGCACCGTCGGTCCGGCCGCCAAAAGGTCACCTGT
CCACTGTGCCGTGCCGACTGGGTGGCTCCCGTGGAAAAGGAGAGGAGACG
GAGGCGGCGGCGGGTACGGCATCACGACGGCACAGTGGCGGATCGCGACG
AAACCGGCGATGGCAATGGCATCGGCAGCGGGAGCGGCGGCGGTGGCGGC
GTCGTTAGCAGCGACGCTGAGATGAACTGCGCTTCTTGCCGTTCCACTTT
TGCTCCGGAGCTTTCTCGCTACCGCTGTGCCATCTGCACCGTCCAACGAG
ACGTCTGTCGCCGTTGCTTCACCGACTTGCGCGTCGGTGCTATGTGCATA
GAGCAGAACCACGCGTTTGTGACGGCGCGCGCCGGCGGTGGCGAGCGCTC
GGCCTGGCAGTCGGCGCCTTTCCCGCCGTGCAGCAGCATCAGTGACGCTG
GCAGCAGATACCGCGGAGGTGGCAGCGCGTCGCAGTTACGGTGGTTACGG
CCGCTGCAGGCGCAGCGGCCGTCGCCTCAGCTGCTGGCGCTGCAGGGGCG
CGAGCTCAGTACGGACGACTATGACCTTCTCCTGCAGCTCGACATTCGGG
GCGGCGCCGCCCGCCCGCTGCACCAGCACTTGCTGGCGATGCTGCCGTCT
CACGTTGGCAGCGGCGGCGGCAGCAGTGGCAGCGGCGGCGGCAGCAGTGG
CAGCGGCGGCGGCGGCGTCGTCGTCCGAGCCATGCAGCGGCGG
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