mRNA_P-wetherbeei_contig57317.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: C8S1I6_9RHOB (Hemolysin-type calcium-binding region n=1 Tax=Rhodobacter sp. SW2 TaxID=371731 RepID=C8S1I6_9RHOB) HSP 1 Score: 89.4 bits (220), Expect = 1.320e-17 Identity = 82/118 (69.49%), Postives = 92/118 (77.97%), Query Frame = 1
Query: 13 TASYSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVNLAAGSGTGGDAEGDVLSGIENVVGS 366
TASY+ STA V VNL TG G+ GDAAGD L+GIENL+G DTLTGDAGAN+XXXXXXXXXXXXXXXXXXXXXXXXXXX +VNL G+G+GGDA GDVL+ IEN+ GS
Sbjct: 84 TASYAASTAAVSVNLTTGTGSGGDAAGDTLSGIENLLGSDYNDTLTGDAGANVXXXXXXXXXXXXXXXXXXXXXXXXXXXADYSLSLAAVNVNLTTGTGSGGDAAGDVLTAIENLTGS 201
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: UPI001C99D396 (Ig-like domain-containing protein n=1 Tax=Azospirillum sp. 412522 TaxID=2494548 RepID=UPI001C99D396) HSP 1 Score: 84.0 bits (206), Expect = 1.110e-15 Identity = 80/119 (67.23%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 10 DTASYSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVNLAAGSGTGGDAEGDVLSGIENVVGS 366
DTA+Y+ S A V V+LA GAG GDA GD+L+GIENLVG D L+GDAGAN+XXXXXXXXXXXXXXXXXXXXXXXXXX V+L+AG+G GGDAEGDVLSG+EN+ GS
Sbjct: 919 DTATYAASGAGVTVDLAAGAGLGGDAEGDLLSGIENLVGSGHDDRLSGDAGANLXXXXXXXXXXXXXXXXXXXXXXXXXXTADYSASGAGVTVDLSAGTGLGGDAEGDVLSGVENLTGS 1037
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: UPI001FCAD6BB (calcium-binding protein n=1 Tax=Azospirillum sp. B506 TaxID=137721 RepID=UPI001FCAD6BB) HSP 1 Score: 82.0 bits (201), Expect = 4.400e-15 Identity = 87/117 (74.36%), Postives = 96/117 (82.05%), Query Frame = 1
Query: 16 ASYSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVNLAAGSGTGGDAEGDVLSGIENVVGS 366
A YS S A V V+L++GAG GDA GD+L+GIENL G GD LTGD G N+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+L AG+G GGDAEGD+LSGIENV GS
Sbjct: 381 ADYSASAAGVAVDLSSGAGLGGDAEGDLLSGIENLTGSAQGDRLTGDGGVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTVDLVAGTGVGGDAEGDLLSGIENVTGS 497
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: G7ZGF9_AZOL4 (Cadherin domain-containing protein n=1 Tax=Azospirillum lipoferum (strain 4B) TaxID=862719 RepID=G7ZGF9_AZOL4) HSP 1 Score: 82.0 bits (201), Expect = 5.170e-15 Identity = 76/119 (63.87%), Postives = 88/119 (73.95%), Query Frame = 1
Query: 10 DTASYSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVNLAAGSGTGGDAEGDVLSGIENVVGS 366
DTASY+ S A V V+LA G+G GDA GD LTG+ENL+G GD G+ GAN+ XXXXXXXXXXXXXXXXXXXXXXXX V+LAAG+G+GGDAEGD+LSGIEN+ GS
Sbjct: 919 DTASYAASGAGVTVDLAAGSGAGGDAEGDRLTGVENLIGSAHGDRXXGNGGANLLDXXXXXXXXXXXXXXXXXXXXXXXXTADYSASDTGVTVDLAAGAGSGGDAEGDLLSGIENLTGS 1037
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: A0A0F2KS61_9PROT (Calcium-binding protein n=1 Tax=Azospirillum thiophilum TaxID=528244 RepID=A0A0F2KS61_9PROT) HSP 1 Score: 82.0 bits (201), Expect = 5.170e-15 Identity = 80/121 (66.12%), Postives = 86/121 (71.07%), Query Frame = 1
Query: 4 GSDTASYSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVNLAAGSGTGGDAEGDVLSGIENVVGS 366
G D A YS S A V V+LA G G GDA GDVL GIEN+ G GD LTGD AN XXXXXXXXXXXXXXXXXXXXXXXXXX V+L+AG+G GGDAEGDVLSG+ENV GS
Sbjct: 1233 GIDLADYSASAAGVTVDLAAGTGAGGDAEGDVLAGIENVTGSAFGDRLTGDGAANXXXXXXXXXXXXXXXXXXXXXXXXXXXTADYSASTGGVAVDLSAGAGAGGDAEGDVLSGVENVTGS 1353
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: A0A554TXV8_9MYCO (Tandem-95 repeat protein (Fragment) n=1 Tax=Mycobacterium sp. KBS0706 TaxID=2578109 RepID=A0A554TXV8_9MYCO) HSP 1 Score: 80.9 bits (198), Expect = 1.200e-14 Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 1
Query: 10 DTASYSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVNLAAGSGTGGDAEGDVLSGIENVVGS 366
D A+Y +TA V VNL TGAG+ GDA GD GIEN+ GG AGDT+TG+ GAN+XXXXXXXXXXXXXXXXXXXXXXXXXX VNL G+G+GG+A+GD L+GIEN+VGS
Sbjct: 518 DLATYWGTTAAVAVNLLTGAGSGGDAQGDTYFGIENVHGGMAGDTITGNDGANVXXXXXXXXXXXXXXXXXXXXXXXXXXLVTYDGSTAGVTVNLQTGAGSGGEAQGDTLTGIENLVGS 636
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: UPI00186AB366 (cellulase family glycosylhydrolase n=1 Tax=Aureimonas psammosilenae TaxID=2495496 RepID=UPI00186AB366) HSP 1 Score: 80.1 bits (196), Expect = 2.310e-14 Identity = 78/118 (66.10%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 13 TASYSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVNLAAGSGTGGDAEGDVLSGIENVVGS 366
TASY+ S A + ++L G GT GDA GD LTGIEN++G DTL GDAGAN XXXXXXXXXXXXXXXXXXXXXXXXXXX V+LAAG+GTGGDAEGD L IEN+ GS
Sbjct: 757 TASYTNSRAGIQIDLTAGTGTGGDAEGDKLTGIENIIGSNFSDTLRGDAGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSYAGSQSGVKVDLAAGTGTGGDAEGDTLFSIENLTGS 874
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: A0A1I1TJ38_9RHOB (Ca2+-binding protein, RTX toxin-related n=1 Tax=Sulfitobacter brevis TaxID=74348 RepID=A0A1I1TJ38_9RHOB) HSP 1 Score: 79.3 bits (194), Expect = 3.990e-14 Identity = 86/124 (69.35%), Postives = 97/124 (78.23%), Query Frame = 1
Query: 22 YSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---------VNLAAGSGTGGDAEGDVLSGIENVVGS 366
YSTST+ V VNL TG G+ GDA GDVL+ ENL G D+LTGDAGAN+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D VNLA G+G+GGDA+GD L+G+EN+ GS
Sbjct: 230 YSTSTSAVTVNLTTGIGSGGDAQGDVLSNFENLAGSNYNDSLTGDAGANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADYTTSGAGVTVNLATGTGSGGDAQGDTLTGVENITGS 353
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: A0A554UCE9_9MYCO (Calcium-binding protein n=1 Tax=Mycobacterium sp. KBS0706 TaxID=2578109 RepID=A0A554UCE9_9MYCO) HSP 1 Score: 79.3 bits (194), Expect = 4.190e-14 Identity = 74/119 (62.18%), Postives = 82/119 (68.91%), Query Frame = 1
Query: 10 DTASYSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVNLAAGSGTGGDAEGDVLSGIENVVGS 366
DT Y S V V+L TG GTAGDA GD LT IEN+VG D L GD GAN+ XXXXXXXXXXXXXXXXXXXXXX V+LAAG+GTGGDA+GD LSGIE++VGS
Sbjct: 619 DTVYYDGSAIGVGVDLRTGTGTAGDAQGDTLTAIENIVGSAFVDILQGDGGANVLSGGXXXXXXXXXXXXXXXXXXXXXXRVDYDGSAAGVQVDLAAGTGTGGDAQGDTLSGIEDIVGS 737
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Match: A0A2U1WKZ0_9PROT (Calcium-binding protein (Fragment) n=1 Tax=Azospirillum sp. TSA6c TaxID=709813 RepID=A0A2U1WKZ0_9PROT) HSP 1 Score: 79.0 bits (193), Expect = 6.030e-14 Identity = 78/119 (65.55%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 10 DTASYSTSTATVXVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTGDAGANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVNLAAGSGTGGDAEGDVLSGIENVVGS 366
DTA+Y+ S A V V+LA G G GDA GD LTGIE +VG D LTGDA AN XXXXXXXXXXXXXXXXXXXXXXXX V+LAAG+G GGDAEGDVLSGIEN+ GS
Sbjct: 919 DTATYAASGAGVTVDLAAGTGAGGDAEGDRLTGIETVVGSAHDDRLTGDAAANRLEXXXXXXXXXXXXXXXXXXXXXXXXTADYSASEAGVTVDLAAGTGLGGDAEGDVLSGIENLTGS 1037 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57317.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57317.1.1 >prot_P-wetherbeei_contig57317.1.1 ID=prot_P-wetherbeei_contig57317.1.1|Name=mRNA_P-wetherbeei_contig57317.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp SGSDTASYSTSTATVTVNLATGAGTAGDAAGDVLTGIENLVGGTAGDTLTback to top mRNA from alignment at P-wetherbeei_contig57317:7..510- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57317.1.1 ID=mRNA_P-wetherbeei_contig57317.1.1|Name=mRNA_P-wetherbeei_contig57317.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57317:7..510- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57317:7..510- >mRNA_P-wetherbeei_contig57317.1.1 ID=mRNA_P-wetherbeei_contig57317.1.1|Name=mRNA_P-wetherbeei_contig57317.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57317:7..510- (Phaeothamnion wetherbeei SAG_119_79)back to top |