mRNA_P-wetherbeei_contig5702.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI) HSP 1 Score: 261 bits (666), Expect = 2.300e-81 Identity = 130/143 (90.91%), Postives = 136/143 (95.10%), Query Frame = 1
Query: 1 CVMEIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGSDMGRIHAAARMVAELISKAPVNVNSAGVEDEVVSHMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIQDVFNF 429
CVM+IAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITG+DM RIHAAA +V +LISKAPVNVNSAGVEDEV SHMI+CPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRL VAMI+DV F
Sbjct: 34 CVMDIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITF 176
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: A0A835YRS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS0_9STRA) HSP 1 Score: 243 bits (619), Expect = 2.760e-72 Identity = 127/161 (78.88%), Postives = 137/161 (85.09%), Query Frame = 1
Query: 1 CVMEIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGSDMGRIHAAARMVAELISKAPVNVNSAGVEDEVVSHMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMK------------------VIVSGIPQSVRLAVAMIQDVFNF 429
CV++IAPEVVGWVIGRSG+HIKEMKHRSGCGMWVDQKDLKLYITG+DM RIH AA MVA+LISKAPVN+N+AGV+DEVVS MIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMM VIVSGI QSVRLAVAMI+DVF+F
Sbjct: 301 CVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSF 461
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: A0A836CJQ9_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ9_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.540e-67 Identity = 123/166 (74.10%), Postives = 130/166 (78.31%), Query Frame = 1
Query: 22 EVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGSDMGRIHAAARMVAELISKAP------------------------------VNVNSAGVEDEVVSHMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIQDVFNF 429
EVVGWVIGRSG+HIKEMKHRSGCGMWVDQKDLKLYITG+DM RIH AA MVA+LISK P VNV++AGVEDEVVS M+DCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMI+DVF F
Sbjct: 318 EVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKVPYVPSFKGMYRAYQXXXXXXXXXXXXXXXXXVNVSAAGVEDEVVSQMMDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIEDVFTF 483
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE) HSP 1 Score: 212 bits (540), Expect = 1.240e-61 Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 1
Query: 70 MKHRSGCGMWVDQKDLKLYITGSDMGRIHAAARMVAELISKAPVNVNSAGVEDEVVSHMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIQDVFNF 429
++HRSGCGMWVDQKDLKLYITG+DM RIHAAA +V +LISKAPVNVNSAGVEDEV SHMI+CPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRL VAMI+DV F
Sbjct: 59 LRHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITF 178
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: A0A835ZGS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS8_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.480e-34 Identity = 66/142 (46.48%), Postives = 97/142 (68.31%), Query Frame = 1
Query: 1 CVMEIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGSDMGRIHAAARMVAELISKAPVNVNSAGVEDEVVSHMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIQDVFN 426
C M+I EVVGWVIG+SG+ IK++K+++GC MWVDQ+ LKL ITG D+ + AA+ V ++ AP+ AG + V+ +DCPPHL+ +L R +TI RI +E+RA VV+N+KM +VIV G P +V++A +Q +
Sbjct: 53 CDMDIDAEVVGWVIGKSGSTIKDLKNKTGCNMWVDQRALKLTITGPDVRTVEHAAKSVEAYVAAAPIK---AGAVEAAVTRSLDCPPHLLDVLGDR--ATIARIVKETRAQVVVNKKMARVIVRGGPHAVQMACGKVQAIIT 189
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.380e-30 Identity = 64/140 (45.71%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 1 CVMEIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGSDMGRIHAAARMVAELISKAPVNVNSAGVEDEVVSHMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIQDV 420
C M+I EVVGWVIGR+G+ IK++K+++GC MWVDQ+ LKL ITG D+ + AA+ V ++ AP+ AG + V+ ++CPPHL+ +L R +TI RI +E+RA VV+N+KM +VI+ G +V +A IQ +
Sbjct: 68 CDMDIDAEVVGWVIGRNGSTIKDLKNKTGCNMWVDQRALKLTITGPDVCAVEHAAKCVEAYVAAAPIK---AGAVEAAVTRSLECPPHLLDMLGDR--ATIARIVKETRAQVVVNKKMARVIIRGNAHAVHMACGRIQTI 202
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI) HSP 1 Score: 116 bits (290), Expect = 1.880e-27 Identity = 63/133 (47.37%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 1 CVMEIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGSDMGRIHAAARMVAELISKAPVNVNSAGVEDEVVSHMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLA 399
C M+I EVVGWVIG++G+ IK+MKH++GC MWVDQ+ LKL ITG D+ + AA+ V ++ AP+ AG + V+ I+CPP L+ L R +TI RI +E+ A VV+N+K+ ++IV G +SV LA
Sbjct: 64 CDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTIECPPQLLDDLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLA 191
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: A0A7S2UTA3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTA3_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.230e-14 Identity = 45/149 (30.20%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 7 MEIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQ-----KDLKLYITGSDMGRIHAAARMVAELISKAPVNVNSAGVEDEVVSHMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQK----MMKVIVSGIPQSVRLAVAMIQDVFN 426
++ P VVG VIG+ G I+E+ +S C + VDQ ++ K+ + G + ++V E+I+ A ++H+IDCPP ++G +IGRGG TI+ +++ S A + ++Q KV++ G Q++ A+ ++ VF+
Sbjct: 132 VDCPPTVVGKVIGKGGETIRELMQKSSCHIQVDQNFPPGENRKVLVKGQPQF-VEMGKKLVEEVINSAAEFPPEGEKGPGWITHLIDCPPQMVGRVIGRGGETIRELQQRSGARIQVDQSGAPNEKKVVIQGTQQTIDAAIKLVDQVFD 279
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: A0A7S0N6L6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0N6L6_9CHLO) HSP 1 Score: 74.3 bits (181), Expect = 8.040e-13 Identity = 45/148 (30.41%), Postives = 82/148 (55.41%), Query Frame = 1
Query: 7 MEIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQK---DLKLYITGSDMGRIHAAARMVAELISKAPVNVNSAGVEDEVVSHMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKM-----MKVIVSGIPQSVRLAVAMIQDVFN 426
+ AP+ VG +IGR+G+ IK+++ R+GC + VD K D ++I+G AA L+ + N N + + ++CPP ++G +IGRGG TI+ ++ S A+++++Q ++ +SG +SV A M+ D+ +
Sbjct: 116 LHAAPDKVGRIIGRAGSTIKDLETRTGCRIQVDHKAEGDKPVHISGHP-----AAVEQCKALVLEVMENENPSHAPGDS-QRTLECPPGIVGRIIGRGGETIRSLQSASGAHILVDQNFPPEVNRQITISGKAESVERAYKMVMDLIS 257
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Match: A0A6H5KMM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM6_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 1.860e-12 Identity = 54/166 (32.53%), Postives = 83/166 (50.00%), Query Frame = 1
Query: 4 VMEIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKD-----LKLYITGSDMGRIHAAARMVAELISKAPVNV-NSAGVEDEVVSH----------------MIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKM-----MKVIVSGIPQSVRLAVAMIQDV 420
+++I P VVGWVIG++GA I +++ ++ MW+DQ KL+I G+ ++ AA V L+ APVN A + + + H I CP L+G LIG+ G+ IK IK S ANV + Q V ++G + V LA ++ +V
Sbjct: 634 MLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQ-QVEAAIAEVEFLMKSAPVNTPRPARMGPKQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEV 798 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5702.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5702.1.1 >prot_P-wetherbeei_contig5702.1.1 ID=prot_P-wetherbeei_contig5702.1.1|Name=mRNA_P-wetherbeei_contig5702.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=141bp MEIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGSDMGRIHback to top mRNA from alignment at P-wetherbeei_contig5702:2383..2811- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5702.1.1 ID=mRNA_P-wetherbeei_contig5702.1.1|Name=mRNA_P-wetherbeei_contig5702.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=429bp|location=Sequence derived from alignment at P-wetherbeei_contig5702:2383..2811- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5702:2383..2811- >mRNA_P-wetherbeei_contig5702.1.1 ID=mRNA_P-wetherbeei_contig5702.1.1|Name=mRNA_P-wetherbeei_contig5702.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig5702:2383..2811- (Phaeothamnion wetherbeei SAG_119_79)back to top |