mRNA_P-wetherbeei_contig56884.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: A0A7K0XRT7_9ACTN (DEAD/DEAH box helicase n=3 Tax=root TaxID=1 RepID=A0A7K0XRT7_9ACTN) HSP 1 Score: 256 bits (655), Expect = 4.750e-76 Identity = 131/170 (77.06%), Postives = 145/170 (85.29%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRCEGEAQPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAAL+LDRDLLR+LLGAEELRELLDPGVLADLELELQCL DGRRARS DELHDVLRKVGDLSAAE D+RCEG+ PWL L+ ERRAI V +G E RF+AAEDAARYRDALGCA+P+GLP FT+PV PLE L+GR+ARTH PF AD +RR +PVERV GAL
Sbjct: 867 LAERRAAALALDRDLLRELLGAEELRELLDPGVLADLELELQCLVDGRRARSADELHDVLRKVGDLSAAEVDVRCEGDGAPWLATLLRERRAIAVRIGGEERFVAAEDAARYRDALGCALPMGLPVAFTDPVVHPLEDLVGRYARTHGPFLADGVSRRLAVPVERVVGAL 1036
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: A0A539E3I7_9ACTN (Putative ATP-dependent helicase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E3I7_9ACTN) HSP 1 Score: 249 bits (637), Expect = 1.280e-75 Identity = 129/172 (75.00%), Postives = 142/172 (82.56%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRCEGEA--QPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAAL+LDRDLLRDLLGAEELRELLDPGVLAD+ELELQCL++GRRARS DELHDV RK GDL+AAEADLRCEG WL +L ERR I V + E RFIAAEDA RYRDALGCA+PLGLPR FTEPVP PLE L+GR+ARTH+PF DD ARRF P R++GAL
Sbjct: 135 LAERRAAALALDRDLLRDLLGAEELRELLDPGVLADVELELQCLSEGRRARSADELHDVFRKTGDLTAAEADLRCEGSGLCAAWLAELARERRIIEVGLADEQRFIAAEDAGRYRDALGCALPLGLPRAFTEPVPLPLEALVGRYARTHAPFLNDDVARRFGAPATRITGAL 306
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: A0A7K1B6R8_9ACTN (DEAD/DEAH box helicase n=2 Tax=root TaxID=1 RepID=A0A7K1B6R8_9ACTN) HSP 1 Score: 253 bits (646), Expect = 7.770e-75 Identity = 128/171 (74.85%), Postives = 146/171 (85.38%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRCEG-EAQPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAAL+LDRDLLRDLLGAEELRELLDPGVLADLELELQCLT+GRRAR DELHDVLRKVGDL+AAE DLRCEG + + W+D+L+ RRA+ + +G +VR IAAEDAARYRDALGC++PLGLPR FTEPV PLE L+ R+ARTH+PF ADD ARRF +P R GAL
Sbjct: 866 LAERRAAALALDRDLLRDLLGAEELRELLDPGVLADLELELQCLTEGRRARDPDELHDVLRKVGDLTAAEIDLRCEGSDGRAWVDELIRARRAVEIGIGDDVRVIAAEDAARYRDALGCSLPLGLPRAFTEPVALPLESLVARYARTHAPFVADDVARRFAVPANRAVGAL 1036
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: A0A3C1L590_9ACTN (DEAD/DEAH box helicase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C1L590_9ACTN) HSP 1 Score: 244 bits (622), Expect = 8.590e-74 Identity = 129/171 (75.44%), Postives = 140/171 (81.87%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRCEG-EAQPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAALSLDRDLLRDLLGAEELRELLDPG LADLELELQ L DGRRARS DELHDVLRKVGDLSAAE DLRCEG E+ WL L+H+RRAI VSV R +AAEDAARYRDALGC VPLGLPR FTEPVP PLE L+GR+ART+ PF + A RF + ++R GAL
Sbjct: 398 LAERRAAALSLDRDLLRDLLGAEELRELLDPGALADLELELQLLADGRRARSADELHDVLRKVGDLSAAEVDLRCEGHESATWLASLLHDRRAILVSVAGVERHVAAEDAARYRDALGCNVPLGLPRAFTEPVPHPLESLVGRYARTNGPFVVEGLAARFGISIDRAMGAL 568
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: A0A6C7E3N9_ILUCY (Putative ATP-dependent helicase n=2 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A6C7E3N9_ILUCY) HSP 1 Score: 242 bits (617), Expect = 6.300e-71 Identity = 128/173 (73.99%), Postives = 144/173 (83.24%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRC---EGEAQPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAAL+LDRDLLRDLLGAEELR+LLDP VLAD+ELELQCLT RRARS DELHDVLRKVGDL+ AE DLRC E +A L QL+ E+RAI + VG EVR+IAAEDAARYRDALGCA+P+GLP FT+PV RPLE L+GR+ARTH PF A D ARRFD P ER++GAL
Sbjct: 884 LAERRAAALALDRDLLRDLLGAEELRDLLDPDVLADVELELQCLTGYRRARSADELHDVLRKVGDLTTAEIDLRCVDDEVDAAAALRQLLDEKRAIEIGVGGEVRYIAAEDAARYRDALGCAIPVGLPMAFTDPVARPLEELVGRYARTHGPFLAADVARRFDAPTERIAGAL 1056
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: A0A6I3EYA3_9ACTN (DEAD/DEAH box helicase n=3 Tax=root TaxID=1 RepID=A0A6I3EYA3_9ACTN) HSP 1 Score: 241 bits (615), Expect = 1.160e-70 Identity = 124/170 (72.94%), Postives = 140/170 (82.35%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRCEGEAQPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAALSLDRDLLRDLLGAEELRELLDPG LADLELELQ L DGRRARS DELHDVLR++GDL+A E DLR E ++ PW+ +LV RRA++VSV E R IAA+DAARYRDALGC VPLGLPREFTEPVP PLE L+ R+ARTH PF + A+R + VER +GAL
Sbjct: 839 LAERRAAALSLDRDLLRDLLGAEELRELLDPGALADLELELQLLADGRRARSADELHDVLRRLGDLTAQELDLRAEADSGPWVAELVQHRRAVSVSVAGEQRLIAADDAARYRDALGCNVPLGLPREFTEPVPHPLEALVVRYARTHGPFVVESLAQRLGISVERATGAL 1008
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: A0A7Y1ZTT3_9ACTN (DEAD/DEAH box helicase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZTT3_9ACTN) HSP 1 Score: 241 bits (614), Expect = 1.600e-70 Identity = 129/195 (66.15%), Postives = 144/195 (73.85%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRCEGE-------------------------AQPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAAL+LDRDLLRDLLGAEELRELLDP VLAD+EL+LQCLTDGRRARS DELHDVLRKVGDL+AAE DLRC+ + WL QL+ E+RAI VSV EVR++A EDAARYRDALGCA+PLGLP FTEPV RPLE L+GR+ARTH PF D ARRF P ER++GAL
Sbjct: 864 LAERRAAALALDRDLLRDLLGAEELRELLDPDVLADVELQLQCLTDGRRARSVDELHDVLRKVGDLTAAEIDLRCQSARDDADELADAGGAAADADEAGADAAGREWLAQLLREKRAIEVSVAGEVRYVAGEDAARYRDALGCAIPLGLPMAFTEPVARPLEELVGRYARTHGPFVTADVARRFGAPAERIAGAL 1058
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: A0A2E0RN34_9ACTN (DEAD/DEAH box helicase n=2 Tax=Acidimicrobiales TaxID=84993 RepID=A0A2E0RN34_9ACTN) HSP 1 Score: 240 bits (612), Expect = 2.960e-70 Identity = 120/171 (70.18%), Postives = 142/171 (83.04%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRCEG-EAQPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAAL+LDRDLLR+LLG+EELRELLDPGVLAD+ELELQ L DGRRARS DELHDV R+VGDL+ +E D RCEG + + W+D+LV ERR I + +G +VR+ AAEDAARYRDA GC++P+GLP FT+PVP PLE L+GRFARTH PF A D ARRF PVER+ GA+
Sbjct: 851 LAERRAAALALDRDLLRELLGSEELRELLDPGVLADVELELQHLADGRRARSADELHDVFRRVGDLTISEVDARCEGSDGRGWVDELVRERRVIEIGIGDDVRYAAAEDAARYRDAFGCSIPVGLPIAFTDPVPHPLESLVGRFARTHGPFLAVDVARRFAAPVERIEGAI 1021
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: UPI000344ABD1 (DEAD/DEAH box helicase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000344ABD1) HSP 1 Score: 235 bits (600), Expect = 1.230e-68 Identity = 126/189 (66.67%), Postives = 142/189 (75.13%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRCE-------------------GEAQPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAAL+LDRDLLRDLLGAEELR+LLDP VLAD+ELELQC+ + RRARS DELHDVLRKVGDL+AAE DLRC G Q W+ QLV E+RAI + VG E+RF AAEDAARYRDALGCA+P+GLP FTEPV RPLE L+GR+ARTH PF A D A R D P+ERV GA+
Sbjct: 879 LAERRAAALALDRDLLRDLLGAEELRDLLDPEVLADVELELQCVAEHRRARSPDELHDVLRKVGDLTAAEVDLRCTDDRDGVRSSVDAPELPTSGGFGQVWMQQLVEEKRAIEIGVGGEMRFAAAEDAARYRDALGCAIPVGLPFAFTEPVARPLEDLVGRYARTHGPFVAADVAGRLDAPLERVGGAI 1067
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Match: A0A6I3WWQ7_9ACTN (DEAD/DEAH box helicase n=2 Tax=root TaxID=1 RepID=A0A6I3WWQ7_9ACTN) HSP 1 Score: 234 bits (597), Expect = 3.090e-68 Identity = 122/170 (71.76%), Postives = 139/170 (81.76%), Query Frame = 1
Query: 1 LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRARSHDELHDVLRKVGDLSAAEADLRCEGEAQPWLDQLVHERRAITVSVGSEVRFIAAEDAARYRDALGCAVPLGLPREFTEPVPRPLELLIGRFARTHSPFTADDAARRFDLPVERVSGAL 510
LA RRAAAL+LDRDLLRDLLGAEELRELLD GVLADLELELQCL DGRRARS DELHD LR+VG+L+A+E +LRCEG A W LV ERRAI V V +IAA+DAARYRDALGC++P+GLP FT+PV RPLE L+ R+ARTH PF + DAARRF L +ER +GAL
Sbjct: 869 LAERRAAALALDRDLLRDLLGAEELRELLDAGVLADLELELQCLADGRRARSADELHDALRRVGELTASEIELRCEGPAAEWAAALVAERRAIVVRVADTDCYIAADDAARYRDALGCSLPMGLPMAFTDPVARPLEELLRRYARTHGPFVSSDAARRFGLSLERAAGAL 1038 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56884.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56884.1.1 >prot_P-wetherbeei_contig56884.1.1 ID=prot_P-wetherbeei_contig56884.1.1|Name=mRNA_P-wetherbeei_contig56884.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp LAARRAAALSLDRDLLRDLLGAEELRELLDPGVLADLELELQCLTDGRRAback to top mRNA from alignment at P-wetherbeei_contig56884:4..513- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56884.1.1 ID=mRNA_P-wetherbeei_contig56884.1.1|Name=mRNA_P-wetherbeei_contig56884.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig56884:4..513- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56884:4..513- >mRNA_P-wetherbeei_contig56884.1.1 ID=mRNA_P-wetherbeei_contig56884.1.1|Name=mRNA_P-wetherbeei_contig56884.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig56884:4..513- (Phaeothamnion wetherbeei SAG_119_79)back to top |