mRNA_P-wetherbeei_contig5657.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: D7G591_ECTSI (Calcium uniporter protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G591_ECTSI) HSP 1 Score: 107 bits (267), Expect = 8.120e-25 Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 1
Query: 13 RTELAAMEKEDAQLTALEAVAARRVRSNTGAKKLAVLSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNLLRAALERQLRSARGRLGYDAGSHAALREAMQRHRLAVDRL 405
R +L A+ EDA+L + + + + KK AVL+F+ AQFG LAY VYE+YSWD+MEPA+YFLMLSY V SLYF+TK R S++NL AL+R + GY SH ++ ++R+ AV+ L
Sbjct: 279 RQQLNALYSEDARLQGIRDILIAKAQRQVTLKKGAVLAFMTAQFGTLAYCVYEVYSWDVMEPATYFLMLSYSVGSSLYFSTKNREASFENLEGVALKRSEAKLKSAHGYSRTSHDEVKGEIKRYEEAVELL 409
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: A0A835ZDG9_9STRA (MCU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDG9_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 4.660e-21 Identity = 55/110 (50.00%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 82 RVRSNTGAKKLAVLSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNLLRAALERQLRSARGRLGYDAGSHAALREAMQRHRLAVDRLAA 411
R R K VL FL QF GL YLVYE+YSWDIMEPASYFLMLSY V +LYF+ K+R ++DNLL+ A+ + R GY +H A + R R A D L A
Sbjct: 467 RARRGARIKSAGVLGFLTLQFSGLFYLVYEVYSWDIMEPASYFLMLSYSVGSALYFSFKKREATFDNLLQLAIAKHQRQLEPEHGYSVAAHDAAALHVARIRRARDVLCA 576
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: A0A1V9ZV62_9STRA (Calcium uniporter protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZV62_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.580e-9 Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 106 KKLAVLSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNLLRAALERQL 312
+K A L F+ +GGLAY V+++YSWDIMEP +YF+ SY VA S Y + +Y N+ + +++L
Sbjct: 260 QKFAALGFITTFYGGLAYTVWDVYSWDIMEPITYFIGFSYVVASSFYHTKTKAESTYPNMWNRSYQKKL 328
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: A0A2R5GJK2_9STRA (Calcium uniporter protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJK2_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.630e-8 Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 115 AVLSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNLLRAALERQLRSARGRLGYDAGSHAALREAMQR 381
A FL AQ LAY V+ +YSWD+MEP +YF+ S + G+ YFA RR SYD L L R+ S + G+D ALR +R
Sbjct: 270 AAFVFLSAQNLVLAYGVWGVYSWDVMEPITYFIGSSVTLWGAFYFAWLRRENSYDTLFNNMLARRRASLHRQDGFDESQVIALRRLYRR 358
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: A0A024TH76_9STRA (Calcium uniporter protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TH76_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.690e-8 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 103 AKKLAVLSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNL 285
AKK A L+F+ + + G+ YLV+++YSWD+MEP SYF+ S + GS Y RR+ Y N+
Sbjct: 271 AKKWAGLAFIASFYTGMGYLVWDVYSWDVMEPISYFVGFSAVLGGSFYHTLTRRDAQYTNM 331
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: A0A067BEQ5_SAPPC (Calcium uniporter protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BEQ5_SAPPC) HSP 1 Score: 60.1 bits (144), Expect = 3.140e-8 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 121 LSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNLLRAALERQL 312
L F+ +GGLAY V+++YSWD+MEP +YF+ S +A S Y R +Y N+ A E++L
Sbjct: 108 LGFITTFYGGLAYTVWDVYSWDVMEPITYFIGFSAVLASSFYHTMTSRESTYPNMWNRAYEKKL 171
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: A0A067BWC6_SAPPC (Calcium uniporter protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BWC6_SAPPC) HSP 1 Score: 60.5 bits (145), Expect = 4.940e-8 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 121 LSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNLLRAALERQL 312
L F+ +GGLAY V+++YSWD+MEP +YF+ S +A S Y R +Y N+ A E++L
Sbjct: 270 LGFITTFYGGLAYTVWDVYSWDVMEPITYFIGFSAVLASSFYHTMTNRESTYPNMWNRAYEKKL 333
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: A0A5D6XJV7_9STRA (Calcium uniporter protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJV7_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.610e-8 Identity = 33/106 (31.13%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 4 HGDRTELAAMEKEDAQLTALEAVAA---RRVRSNTGAKKLAVLSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNLLRAALERQL 312
HG + + A +E+ ++L +AV A R + A+K L+ L +G L YLV+++YSWD+MEP +YF+ + + S Y +++P+Y N+ + +++L
Sbjct: 223 HGRKAQEARLEELTSELKKAQAVDADTQRAAQKVPNAQKWITLTGLSTFYGSLMYLVWDVYSWDVMEPITYFIGFTAVLGNSFYHTITKKDPTYTNIWQKKYQKRL 328
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: A0A485L821_9STRA (Calcium uniporter protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L821_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.750e-7 Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 70 VAARRVRSNTGAKKLAVLSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNLLRAALERQL 312
+AARRV + KK +F+ + + G+ YLV+++YSWD+MEP SYF+ S + GS Y R + +Y N+ + +R L
Sbjct: 268 LAARRVPN---LKKWGAAAFIASFYTGMGYLVWDVYSWDVMEPISYFVGFSAVLGGSFYHTMTRSDATYPNMWQRDYDRHL 345
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Match: A0A1V9YJK2_9STRA (Calcium uniporter protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJK2_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.340e-7 Identity = 27/69 (39.13%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 106 KKLAVLSFLMAQFGGLAYLVYEIYSWDIMEPASYFLMLSYGVAGSLYFATKRRNPSYDNLLRAALERQL 312
+K A L F+ +GGLAY V+++YSWD+MEP +YF+ S + S Y R +Y N+ A ++L
Sbjct: 265 QKFAGLGFITTFYGGLAYTVWDVYSWDVMEPITYFIGFSAVLMSSFYHTMTTRESTYPNMWNRAYAKKL 333 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5657.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5657.1.1 >prot_P-wetherbeei_contig5657.1.1 ID=prot_P-wetherbeei_contig5657.1.1|Name=mRNA_P-wetherbeei_contig5657.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MHGDRTELAAMEKEDAQLTALEAVAARRVRSNTGAKKLAVLSFLMAQFGGback to top mRNA from alignment at P-wetherbeei_contig5657:278..1079+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5657.1.1 ID=mRNA_P-wetherbeei_contig5657.1.1|Name=mRNA_P-wetherbeei_contig5657.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=802bp|location=Sequence derived from alignment at P-wetherbeei_contig5657:278..1079+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5657:278..1079+ >mRNA_P-wetherbeei_contig5657.1.1 ID=mRNA_P-wetherbeei_contig5657.1.1|Name=mRNA_P-wetherbeei_contig5657.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig5657:278..1079+ (Phaeothamnion wetherbeei SAG_119_79)back to top |