mRNA_P-wetherbeei_contig5630.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: A0A835YIR5_9STRA (Clathrin light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR5_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.930e-31 Identity = 61/105 (58.10%), Postives = 84/105 (80.00%), Query Frame = 1
Query: 73 FMGQWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQADVSKEFQDAGRMRSIFIQLKNDPL 387
FMG+WEA+L+EKA E+ + +A +AAR + +KF A+R +E +M NRTQEQVFLEQLE+DLES+NPWER+V+LVDTQA+ S F+D R++++ IQLKNDP+
Sbjct: 96 FMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPI 200
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: D7G9H3_ECTSI (Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9H3_ECTSI) HSP 1 Score: 117 bits (294), Expect = 2.770e-30 Identity = 65/115 (56.52%), Postives = 87/115 (75.65%), Query Frame = 1
Query: 46 LSPSAAGSDFMGQWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQADVSKEFQDAGRMRSIFIQLKNDPLE 390
+ PSA +FM +W+A L EKA +E + +A A EAA+ + +RAA +EAKM QNR QEQ+FLEQLE +LES+NPWERVV+LVDTQ++V ++F+D RM SI IQLKNDP++
Sbjct: 106 VEPSAL-DEFMERWQAGLVEKARIEAEAKAAALEAAKADLETHSVERAANKEAKMGQNREQEQIFLEQLEGELESENPWERVVSLVDTQSEVVEDFKDTSRMTSILIQLKNDPID 219
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: A0A7S3Y6V3_HETAK (Clathrin light chain n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6V3_HETAK) HSP 1 Score: 111 bits (278), Expect = 1.560e-27 Identity = 64/108 (59.26%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 70 DFMGQWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQADVSKEFQDAGRMRSIFIQLKNDPLEV 393
DFM +WE LREK +E+Q EAK+ A+ E + F A + EAKM++NR++EQV LEQLEADLESDNPWER+ NLVD QA+ + D RMRSI IQLKN+PLEV
Sbjct: 153 DFMDKWEQELREKRAVEEQAAEEAKQKAKAELDHFYAQKEKTFEAKMSKNRSEEQVLLEQLEADLESDNPWERITNLVDLQAE--GDDVDKSRMRSILIQLKNEPLEV 258
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: A0A7R9VTD9_9STRA (Clathrin light chain n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VTD9_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.080e-18 Identity = 56/121 (46.28%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 34 LLPCLSPSAAGSDFM----GQWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQADVSKEFQDAGRMRSIFIQLKNDP 384
LLP P G M +W+ L+E+ E +AEA EAAR E KF A+R A RE +MA+NR EQ LE +EADLE+DN W+RVV LV+ D + D RMR + I LKN+P
Sbjct: 113 LLPEPEPEEKGPSPMQKWNDEWQVTLKERKDAENAAKAEAVEAARVELEKFQAERDARRETRMAKNRADEQDKLEAIEADLENDNSWQRVVKLVELTHDTVEGAADVHRMRDVMITLKNEP 233
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: A0A7S2GYA0_9STRA (Clathrin light chain n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GYA0_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 3.510e-18 Identity = 53/115 (46.09%), Postives = 75/115 (65.22%), Query Frame = 1
Query: 40 PCLSPSAAGSDFMGQWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQADVSKEFQDAGRMRSIFIQLKNDP 384
P LSP A ++ +W+ L ++ E +A+ E AR + KF A+R A REAKMA+NR++EQ LE LEADLE+DN W+RVV LV+ D ++ +D RM+ +FI LKN+P
Sbjct: 96 PELSPMAKWNN---EWQVTLMQRKDEENAAKAKDVEQARVDLEKFQAEREARREAKMARNRSEEQDKLEALEADLENDNSWQRVVKLVELTQDSAEASEDTKRMKDVFILLKNEP 207
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: K3X3M0_GLOUD (Clathrin light chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3M0_GLOUD) HSP 1 Score: 86.7 bits (213), Expect = 9.250e-18 Identity = 56/161 (34.78%), Postives = 88/161 (54.66%), Query Frame = 1
Query: 4 RVGSLPACWLLLPCLSPSAAGSDFMGQWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQAD--------------------------VSKEFQDAGRMRSIFIQLKNDPLEVHRAIS 408
R S +P + + FM ++E R+ EKA +++ E+KE A+++ KF+A+R+ ++E+K NR EQ LE+L ADLES+NPWERVV+LV+ +A+ +E +D RMR +F+QLK +PL+ RAI+
Sbjct: 131 RTSSFGQSGAQIPVIEEENELTKFMREYEQRIAEKAVEQEKVAVESKEKAQQDMEKFVAERSRIKESKQQANRVHEQATLEKLAADLESENPWERVVSLVELEANRKQKLAALNAKKDAKNKEADAPKAAKKDEEEEDVSRMRQLFVQLKAEPLDKTRAIA 291
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: A0A2D4BVD7_PYTIN (Clathrin light chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVD7_PYTIN) HSP 1 Score: 82.8 bits (203), Expect = 1.150e-16 Identity = 53/155 (34.19%), Postives = 84/155 (54.19%), Query Frame = 1
Query: 13 SLPACWLLLPCLSPSAAGSDFMGQWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQADVSKEF-------------------------QDAGRMRSIFIQLKNDPLEVHRA 402
++P +P + + FM Q+EA + +KA +++ E KE A+K+ ++F +R+ +E+K NR QEQ LE+L ADLES+NPWERVV+LVD + + ++ +D RMR +F+QLK +PL+ RA
Sbjct: 83 AVPEPMASMPAVEEDNELTKFMRQYEAEIAQKAQEQEKVGVECKEKAKKDMDQFQTERSRKKESKQQANRVQEQATLEKLAADLESENPWERVVSLVDLEVNRKQKLAALNNKKDAKNKEPEPVKSSKKEDEEDLSRMRQLFVQLKAEPLDKTRA 237
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: A0A7S0G9F9_9STRA (Clathrin light chain n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9F9_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 3.270e-16 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1
Query: 73 FMGQWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQADVSKEFQDAGRMRSIFIQLKND 381
F +W+ LRE+ E +AE ++KE F R RE +MA+NR+ EQ LE LEADLE+DN W+RVV +V+ QAD + +D RMR + I LKND
Sbjct: 60 FADEWQVILRERKDHENSSKAEVVMESQKEMELFHERRDKTRETRMAKNRSDEQSKLESLEADLENDNSWQRVVKMVELQADTVEASEDTKRMRDVLISLKND 162
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: A0A8K1CW16_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW16_PYTOL) HSP 1 Score: 80.5 bits (197), Expect = 8.140e-16 Identity = 53/149 (35.57%), Postives = 79/149 (53.02%), Query Frame = 1
Query: 37 LPCLSPSAAGSDFMGQWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQAD-------------------------VSKEFQDAGRMRSIFIQLKNDPLEVHRAIS 408
+P + + FM ++E + KA +++ E KE A+ + +F A+R+ ++E+K NR QEQ LE+L DLES+NPWERVV+LVD + + +E +D RMR +F+QLK DPLE RA S
Sbjct: 83 VPVIEEENELTKFMRKYEGEIAAKAQEQEKVGVECKEKAKHDMEQFTAERSRIKESKQQSNRVQEQATLEKLALDLESENPWERVVSLVDLETNRKQKLAALNAKKDGKNKEAEAPKPVKKEEEEDVSRMRQLFVQLKADPLEKTRAAS 231
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Match: A0A7S4HN92_9STRA (Clathrin light chain n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HN92_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.260e-15 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 82 QWEARLREKATLEKQKEAEAKEAARKERNKFMADRAAMREAKMAQNRTQEQVFLEQLEADLESDNPWERVVNLVDTQADVSKEFQDAGRMRSIFIQLKNDP 384
+W+ L+E+ E ++AE E AR + F +R RE +M++NRT EQ LE +EADLE+DN W+RVV LV+ D + D RMR + IQLKN+P
Sbjct: 133 EWQVTLKERKDNENAEKAEVVEQARADLENFQTERDTRREQRMSKNRTDEQEKLEAIEADLENDNSWQRVVKLVELTHDNVDDAADVARMRDVLIQLKNEP 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5630.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5630.2.1 >prot_P-wetherbeei_contig5630.2.1 ID=prot_P-wetherbeei_contig5630.2.1|Name=mRNA_P-wetherbeei_contig5630.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp GRVGSLPACWLLLPCLSPSAAGSDFMGQWEARLREKATLEKQKEAEAKEAback to top mRNA from alignment at P-wetherbeei_contig5630:2558..3718- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5630.2.1 ID=mRNA_P-wetherbeei_contig5630.2.1|Name=mRNA_P-wetherbeei_contig5630.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1161bp|location=Sequence derived from alignment at P-wetherbeei_contig5630:2558..3718- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5630:2558..3718- >mRNA_P-wetherbeei_contig5630.2.1 ID=mRNA_P-wetherbeei_contig5630.2.1|Name=mRNA_P-wetherbeei_contig5630.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig5630:2558..3718- (Phaeothamnion wetherbeei SAG_119_79)back to top |