mRNA_P-wetherbeei_contig5629.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: A0A7R9YFX6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFX6_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.740e-30 Identity = 59/132 (44.70%), Postives = 88/132 (66.67%), Query Frame = 3
Query: 150 LSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSKDLGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLLACTTAWTFHDAY 545
LSSLPLQ+LVYF+GW+S +FL+ + L++YK Y +++ +L+ + +++ +ARLF SKGNKTE LL + LT P+ + Y +LL LQTYVLR+D+++ S+ +AF GLE L+ T F AY
Sbjct: 11 LSSLPLQVLVYFNGWFSTLFFLLALALFLYKRYSFFYAGNSFAWDLTMLFFLSVVDFARLFLASKGNKTEHAGALLWFICLTAPICVGYAYLLTLQTYVLRLDVVLCSLGLAFVGLEGLIGIFTCVQFMRAY 142
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: A0A6U4EE63_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EE63_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.940e-30 Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 3
Query: 150 LSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSKDLGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLLACTTAWTFHDAY 545
LSSLPLQILVYF+GW+S +FL+ I L++YK Y Y+ G +L+ + L +L RLF SKGNKTE L+ + LTVP+ + Y +LL LQTYVLR+D+++ S+ + F G E L++ T F AY
Sbjct: 15 LSSLPLQILVYFNGWFSTMFFLLGIALFLYKRYNLYYAGNGFGWDLAMLFLMTVLDALRLFLGSKGNKTEHAGALMWFIFLTVPICVGYAYLLTLQTYVLRIDVVLCSLGLIFVGFECLISIFTCVQFLRAY 146
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: A0A7S0ETP7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ETP7_9EUKA) HSP 1 Score: 112 bits (281), Expect = 2.900e-28 Identity = 64/139 (46.04%), Postives = 92/139 (66.19%), Query Frame = 3
Query: 135 GHAVILSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSK---DLGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLLACTTAWTFHDA 542
G + +LSSLPLQIL +F+GWY + + LY +K +P + LGLE++ V L A++++AR+F +KGNKTE PLL+SLVL VP ++ V+ L LQ YV R D+++ +I++AF GLE LL+C T TF A
Sbjct: 6 GGSAMLSSLPLQILFFFNGWYDVAFTIAMSSLYAWKGSTLPYPDELRPMLGLEVAIVFLLAIIEYARIFLGTKGNKTEQSGPLLMSLVLGVPAMIANVYFLRLQIYVTRADLVLNAISIAFVGLEILLSCLTIITFAKA 144
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: A0A6U1LNY5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1LNY5_9STRA) HSP 1 Score: 111 bits (277), Expect = 9.470e-28 Identity = 58/134 (43.28%), Postives = 84/134 (62.69%), Query Frame = 3
Query: 147 ILSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSKDLGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLLACTTAWTFHDAYH 548
ILSSLPLQIL+YF+ W+ + N C ++YK YY+P +E++ V ++A++QWARLF SK NKTE L+P++ SL+LT V Y + + Q YVLRVD+I+ +I + F LE A+ F A +
Sbjct: 10 ILSSLPLQILIYFENWFVLGFTAFNACAFVYKGSSYYYPKYMWPVEVATVLVFAVVQWARLFLASKSNKTEMLRPMIWSLLLTPCSVTAYWYFIYAQLYVLRVDVIMNAIGIVFVALELPFQLVAAFHFSTAIY 143
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: A0A2V0NLL2_9CHLO (Transmembrane protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NLL2_9CHLO) HSP 1 Score: 110 bits (274), Expect = 2.820e-27 Identity = 57/139 (41.01%), Postives = 89/139 (64.03%), Query Frame = 3
Query: 117 MKPGEAGHAVILSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSKDLGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLLACTTAWTF 533
M PG A +L+SLPLQ+ +YF GW+ A ++++++ L+IYK +P E + V L+ L++ RLF SKGNKTE PLL SL+L VP+V V+ + QTYVL++++++ +I+++F GL+ LL C F
Sbjct: 1 MHPGTARARPVLTSLPLQVFIYFGGWWDALFWVLSVALFIYKGLALPYPPGRFAAEFTFVWLWLLVEPGRLFLGSKGNKTEQPGPLLFSLLLAVPIVAFLVYHVKFQTYVLKLEVLLNAISLSFLGLQVLLGCLATARF 139
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: A0A7S3RB10_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3RB10_DUNTE) HSP 1 Score: 109 bits (273), Expect = 1.650e-26 Identity = 52/132 (39.39%), Postives = 89/132 (67.42%), Query Frame = 3
Query: 147 ILSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSKDLGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLLACTTAWTFHDA 542
+L+SL LQIL++F W++ FY+++NI +++YK +P ++ +E S LY +L+ RLF +KGNK E + P++ SL+L +P++ +Y + + QTYVL++D+I+ IA+ F GL+ LL+ A+ F A
Sbjct: 64 VLTSLTLQILIFFSIWWNCFYYVLNILVFVYKGLVLPYPQQNFDMEFSFAWLYIILEIPRLFLVTKGNKAEQVVPIVFSLILALPLLAMYAYFIDFQTYVLKIDLILNGIALGFIGLQVLLSIFAAYRFATA 195
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: UPI001401FB94 (transmembrane protein 216-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001401FB94) HSP 1 Score: 103 bits (258), Expect = 6.850e-25 Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 3
Query: 144 VILSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSKDLGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLLACTTAWTF 533
+ILSS+PLQ L++ +GWY F+F+ ++IYK +PS +L L++ + + L++ R+F SKGN TE PL + + LTVP V+L V+LL LQTYVLRV++I+ I +A G E +L+ TF
Sbjct: 9 MILSSVPLQFLLFLNGWYLGFFFIAEALIFIYKGQVLPYPSSNLALDIILLFVLTLIEIFRIFFCSKGNLTERKVPLSVGVGLTVPAVVLSVYLLLLQTYVLRVEVIINGILLALHGAELILSIVAIGTF 138
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: A0A5B8MHQ0_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MHQ0_9CHLO) HSP 1 Score: 103 bits (256), Expect = 1.360e-24 Identity = 54/123 (43.90%), Postives = 85/123 (69.11%), Query Frame = 3
Query: 147 ILSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSKD-LGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLLA 512
+++S+P QIL++F +Y A + L+ I ++IYK Y +PS + G ELS VC+ +++ RLF SKGNKT+ + PLL VL++PV++LY++ + LQTYVL++D + + V F GL+ LLA
Sbjct: 7 LVASVPFQILLHFGAYYDALFVLVTIGVFIYKGYYLPYPSANSFGTELSLVCILPVIEACRLFIGSKGNKTQTIGPLLTFCVLSLPVLILYIYYIELQTYVLKIDHFLSIVGVVFLGLQLLLA 129
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: UPI001C66CCB9 (transmembrane protein 80 isoform X2 n=2 Tax=Tetraoninae TaxID=466585 RepID=UPI001C66CCB9) HSP 1 Score: 101 bits (252), Expect = 4.980e-24 Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 3
Query: 147 ILSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSKDLGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLL 509
+LSS+PLQIL Y +G+Y FYF++ + + IYK + +P L +L+ +C+ A+L+ RL+ SKGN TE PL LSLV+TV ++L V+ L QTYVL+ D+I+ ++ + GLES+L
Sbjct: 12 VLSSVPLQILFYINGFYYIFYFVVTLAMIIYKSQVFSYPDDFLAPDLALICIMAVLEVLRLYLGSKGNLTEEEAPLGLSLVITVGSMILSVYFLTWQTYVLKADVIINTVLLFIYGLESVL 132
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Match: A0A383WL38_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WL38_TETOB) HSP 1 Score: 100 bits (248), Expect = 2.320e-23 Identity = 53/144 (36.81%), Postives = 90/144 (62.50%), Query Frame = 3
Query: 117 MKPGE--AGHAVILSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSKDLGLELSCVCLYALLQWARLFSTSKGNKTEALQPLLLSLVLTVPVVLLYVFLLCLQTYVLRVDIIVGSIAVAFAGLESLLACTTAWTFHDA 542
M+PGE A IL+SLPLQI +YF GW+ +++++I ++IYK + +P + E L+ +++ RLF SKGNKTE PL+ S++L+ P++ +V+ L QTY+L+V++++ +I++AF ++ L A F A
Sbjct: 1 MQPGEGSARSRPILTSLPLQIFIYFGGWWDVLFWVLSILVFIYKGFTLPYPPQKFAAEFVVQWLFLIVEPTRLFLGSKGNKTEQSGPLMFSVLLSCPMIAFFVYFLQYQTYILKVEVLLNAISLAFCCIQVLFGMLAAVRFVQA 144 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5629.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5629.1.1 >prot_P-wetherbeei_contig5629.1.1 ID=prot_P-wetherbeei_contig5629.1.1|Name=mRNA_P-wetherbeei_contig5629.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp MKPGEAGHAVILSSLPLQILVYFDGWYSAFYFLINICLYIYKDYKYYFPSback to top mRNA from alignment at P-wetherbeei_contig5629:118..1307- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5629.1.1 ID=mRNA_P-wetherbeei_contig5629.1.1|Name=mRNA_P-wetherbeei_contig5629.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1190bp|location=Sequence derived from alignment at P-wetherbeei_contig5629:118..1307- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5629:118..1307- >mRNA_P-wetherbeei_contig5629.1.1 ID=mRNA_P-wetherbeei_contig5629.1.1|Name=mRNA_P-wetherbeei_contig5629.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig5629:118..1307- (Phaeothamnion wetherbeei SAG_119_79)back to top |