mRNA_P-wetherbeei_contig56220.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: A0A350SMZ8_9BURK (Porin_4 domain-containing protein n=3 Tax=Burkholderiales TaxID=80840 RepID=A0A350SMZ8_9BURK) HSP 1 Score: 241 bits (616), Expect = 4.630e-77 Identity = 114/172 (66.28%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 1 SWVGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTATKEAYRAGLGGFTSRPNNQVRYETPKFGGFSAGLTYALDEDVAANAQTTAINLRYSAGPLDIGFARQEDDFQVLANDREYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARS 516
SWVGLSGGFG+ K GKTDSV+KDIYDLG THNVFDSEFTATKEA+RAGLG FTSRPNNQVRY++P F G SAGLT++L ED A +AI++RY G LD+G A Q++D LA+DR++T + TYNFG R+S YQ +AGDNRKDNE LGVS+P+G+ DLSAGY +S
Sbjct: 93 SWVGLSGGFGSFKLGKTDSVYKDIYDLGNTHNVFDSEFTATKEAFRAGLGNFTSRPNNQVRYDSPNFDGLSAGLTHSLHEDSATAPDISAIDVRYRTGSLDLGLAHQDEDSANLADDRKFTALTATYNFGMARVSALYQQVKAGDNRKDNELGLGVSIPIGSFDLSAGYGQS 264
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: UPI0010F45B85 (porin n=1 Tax=Hydrogenophaga sp. 2FB TaxID=2502187 RepID=UPI0010F45B85) HSP 1 Score: 226 bits (576), Expect = 5.360e-71 Identity = 110/174 (63.22%), Postives = 131/174 (75.29%), Query Frame = 1
Query: 1 SWVGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVF-DSEFTATKEAYRAGLGGFTSRPNNQVRYETPKFGGFSAGLTYALDEDVAANAQTTAINLRYSAGPLDIGFARQEDDFQVLANDREYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARSK 519
SWVGLSGGFG V+ GK DS++KDI DLG T+N+ DS F + EAYRAGL F +RPNNQ+RY++P FGGF+AGLTYALDEDVA Q TAI RY G LD+GF Q +D + ANDR++ + TYNFG R+S YQ +AGDNRKDNE ALGV VPLGN DL+AGY+RSK
Sbjct: 93 SWVGLSGGFGTVRMGKADSIYKDINDLGNTYNISPDSLFNSAAEAYRAGLATFVNRPNNQIRYDSPDFGGFTAGLTYALDEDVAGTPQVTAIAARYRVGKLDVGFGYQNEDQLLRANDRKHRAVAATYNFGPARVSTHYQNVKAGDNRKDNEVALGVGVPLGNWDLTAGYSRSK 266
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: A0A2N2TP24_9PROT (Porin n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-16 TaxID=2013707 RepID=A0A2N2TP24_9PROT) HSP 1 Score: 206 bits (523), Expect = 5.540e-63 Identity = 97/173 (56.07%), Postives = 127/173 (73.41%), Query Frame = 1
Query: 1 SWVGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTATKEAYRAGLGGFTSRPNNQVRYETPKFGGFSAGLTYALDEDVAANAQTTAINLRYSAGPLDIGFARQEDDFQVLANDREYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARSK 519
SWVGLSGGFGAV+ G DS +KDIYD+G ++NVFDS FT T AY AG+G +TSRP+N +RY+TP FGGFS GL+ ALDE + A+NLRY AG LD+G Q+ V+A++R+Y V + Y+F VR+SGQYQ+ E G+ +DNE+A+GV++PLG +LSAGYA K
Sbjct: 97 SWVGLSGGFGAVRAGLLDSAYKDIYDMGNSNNVFDSAFTPTNVAY-AGVGNYTSRPSNHIRYDTPSFGGFSGGLSVALDETAGVSNDANAVNLRYRAGGLDVGLGVQKQKNSVVADERDYRVIAAAYDFKVVRVSGQYQVAEQGNGLEDNEYAIGVTMPLGAFELSAGYAMGK 268
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: A0A0T2YKL0_9BURK (Porin_4 domain-containing protein n=2 Tax=unclassified Hydrogenophaga TaxID=2610897 RepID=A0A0T2YKL0_9BURK) HSP 1 Score: 203 bits (516), Expect = 6.290e-62 Identity = 99/177 (55.93%), Postives = 120/177 (67.80%), Query Frame = 1
Query: 1 SWVGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTA----TKEAYRAGLGGFTSRPNNQVRYETPKFGGFSAGLTYALDEDVAANAQTTAINLRYSAGPLDIGFARQEDDFQVLANDREYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARSK 519
SWVGLSGGFG V G DS FKD +DLG T+N+FDSEFTA T+ A +G FTSRP +Q+RY++PKFGGFS +YA D+ + A +LRY+ GPLD+ Q+ + ANDR+YTV SG YNFGA RLS QYQ E N KDN+FA+GVSVP G DLSAG A S+
Sbjct: 92 SWVGLSGGFGGVTMGLRDSAFKDAFDLGNTYNLFDSEFTAGKASTEGASAVNVGNFTSRPTSQIRYDSPKFGGFSGAYSYAFDQTAGTESDIQAFHLRYAGGPLDVALGFQQQNSATAANDRDYTVLSGLYNFGAFRLSAQYQNAETASNLKDNDFAIGVSVPFGAFDLSAGIATSE 268
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: A0A1Y2R2A6_9BURK (Porin_4 domain-containing protein n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R2A6_9BURK) HSP 1 Score: 201 bits (511), Expect = 4.840e-61 Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 1
Query: 1 SWVGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTATKEAYRAGLGG-------FTSRPNNQVRYETPKFGGFSAGLTYALDEDVA---ANAQTTAINLRYSAGPLDIGFARQEDDFQVLANDREYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARSK 519
SWVGLSGGFGAV+ G DS +KDIYD+GV++N++DSEFT TK AY +G G FTSRP+N VRY++P FGGFS + YA DE+ A N++ TA+NLRY +GPLD+G A Q+ DR +TV + YNFG VR+SGQYQIT+ + +D +++ GV+VP GN D+SAG+ K
Sbjct: 97 SWVGLSGGFGAVRLGLMDSPYKDIYDMGVSNNLYDSEFTPTKIAYLSGAVGTASGVSDFTSRPSNMVRYDSPSFGGFSGSVGYAFDENTAPVTTNSEITALNLRYRSGPLDVGLAYQDQKNATATLDRNFTVLAAAYNFGMVRVSGQYQITDQSNGLEDRDYSFGVTVPFGNFDVSAGFGSGK 279
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: UPI0008266EEA (porin n=1 Tax=Hydrogenophaga palleronii TaxID=65655 RepID=UPI0008266EEA) HSP 1 Score: 195 bits (495), Expect = 8.210e-59 Identity = 96/173 (55.49%), Postives = 119/173 (68.79%), Query Frame = 1
Query: 1 SWVGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTATKEAYRAGLGGFTSRPNNQVRYETPKFGGFSAGLTYALDEDVAANAQTTAINLRYSAGPLDIGFARQEDDFQVLANDREYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARSK 519
S VGLSGGFGAVK G+ D+ F DI DL V+ N++DSEF++TK AY AG+ ++SR +NQ+RYE+P FGGFS G +Y LDED A TTA NLRY AG LD+G Q+ AN REYT +G YNFG RLS Y E + K N + +GV+VP+GN+DLS GYA SK
Sbjct: 95 SIVGLSGGFGAVKLGRHDTSFDDIRDLSVSSNLWDSEFSSTKIAYTAGVADYSSRASNQIRYESPSFGGFSVGASYGLDEDATVKADTTAFNLRYKAGNLDVGVGYQDQK----ANSREYTTVAGAYNFGVARLSAGYNRAEIKNGNKANGYTIGVNVPMGNIDLSVGYAYSK 263
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: A0A6P1J0A0_9BURK (Porin n=3 Tax=unclassified Hydrogenophaga TaxID=2610897 RepID=A0A6P1J0A0_9BURK) HSP 1 Score: 189 bits (480), Expect = 7.880e-56 Identity = 95/175 (54.29%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 1 SWVGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTATKEAYRAGLGGFTSRPNNQVRYETPKFGGFSAGLTYALDEDVAA-NAQTTAINLRYSAGPLDIGFARQEDDFQVL-ANDREYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARSK 519
SWVGLSGGFGAVK G++D+ F DI DL V+ N++DSEFT TK AY AG+ ++SR +NQ+RYE+P F GFS G+ Y LDE + + NLRY AG LD+G RQE + A DREYT SG YNFG R+S + E G N +DNE ++GV+VPLG ++S GYARSK
Sbjct: 154 SWVGLSGGFGAVKIGRSDTSFDDIRDLAVSSNLWDSEFTPTKIAYTAGVPDYSSRASNQIRYESPSFAGFSFGVGYGLDEQASPIKRDVLSYNLRYRAGNLDVGVGRQEQKHESAPATDREYTAISGAYNFGVARVSAGFNRAENGANLRDNELSVGVNVPLGAFEVSVGYARSK 328
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: UPI0015DA826A (porin n=1 Tax=Tepidicella baoligensis TaxID=2707016 RepID=UPI0015DA826A) HSP 1 Score: 186 bits (473), Expect = 1.920e-55 Identity = 88/172 (51.16%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 7 VGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTATKEAYRAGLGGFTSRPNNQVRYETPKFGGFSAGLTYALDEDVAANAQTTAINLRYSAGPLDIGFARQEDDFQVL-ANDREYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARSK 519
VGL+GGFG +K G+TD+ F DI DL V+ +++DSEFT TK Y G+G ++SR NNQ+RYE+P F GF+ G +++LDE+ A A N+RY AG LD+G QE + A+DREYT SG YNFG R+S YQ + G++ KDNE++LGV+VP+ D S GYA SK
Sbjct: 97 VGLTGGFGTLKLGRTDTTFDDIRDLAVSSSLWDSEFTPTKNVYGVGVGDYSSRANNQIRYESPSFSGFTFGASFSLDENAAQKRDINAFNIRYRAGALDVGLGYQEQKHESAPASDREYTALSGAYNFGVARVSAGYQRAKDGNSAKDNEYSLGVNVPVDKFDFSFGYANSK 268
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: UPI001421EA87 (porin n=1 Tax=Aquabacterium sp. A08 TaxID=2718532 RepID=UPI001421EA87) HSP 1 Score: 174 bits (440), Expect = 2.610e-50 Identity = 89/179 (49.72%), Postives = 117/179 (65.36%), Query Frame = 1
Query: 7 VGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTATKEAYRAGLGGFTSRPNNQVRYETPKFGGFSAGLTYALDEDVAANA-------QTTAINLRYSAGPLDIGFARQEDDFQVLANDR-EYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARSK 519
VGL+GGFG VK G+TD+ F DI DL V+ +++DSEFT TK Y G ++SR +NQVRYE+P F GF+ GL+YA DE+ A NA + TA+N RY G LD+G A Q+ + + N +YT SG YNFG RLS YQ + N KDNE+++GV+VPL ++S GYA SK
Sbjct: 106 VGLTGGFGTVKLGRTDTSFDDIRDLAVSSSLWDSEFTPTKNVYGTGRSDYSSRASNQVRYESPSFAGFTVGLSYAFDEE-AVNADPTKNGVKVTALNARYKVGALDLGVATQKQETYLNGNPEIKYTALSGAYNFGVTRLSAGYQQAKDATNTKDNEYSIGVNVPLDKFNISVGYASSK 283
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Match: A0A372EL44_9BURK (Porin n=2 Tax=Hydrogenophaga TaxID=47420 RepID=A0A372EL44_9BURK) HSP 1 Score: 170 bits (430), Expect = 7.050e-49 Identity = 86/182 (47.25%), Postives = 118/182 (64.84%), Query Frame = 1
Query: 1 SWVGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTATKEAYRAGLGG--------FTSRPNNQVRYETPKFGGFSAGLTYALDEDVA-ANAQTTAINLRYSAGPLDIGFARQEDDFQVLANDREYTVFSGTYNFGAVRLSGQYQITEAGDNRKDNEFALGVSVPLGNVDLSAGYARSK 519
S VGL+GGFGAVK G+T++ F DI D+ V ++DSEF+ TK AY +GG ++SR +NQ+RYE+P FGGF+ G++Y LDE + TA NLRY +GPLD+G QE + +V A REYT +G Y+FGAVR+S Y + E G + N F +G ++P+G D S GYA +K
Sbjct: 99 SIVGLTGGFGAVKLGRTETAFDDIRDISVGSALWDSEFSPTKIAYANSVGGVAVGHVADYSSRSSNQIRYESPNFGGFTGGISYGLDEQASPVKRDVTAFNLRYRSGPLDVGLGYQEQNHEVSATKREYTTLAGAYDFGAVRVSAGYNMAEQG-TLESNGFVVGANMPMGPWDFSVGYAYNK 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56220.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56220.1.1 >prot_P-wetherbeei_contig56220.1.1 ID=prot_P-wetherbeei_contig56220.1.1|Name=mRNA_P-wetherbeei_contig56220.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp SWVGLSGGFGAVKFGKTDSVFKDIYDLGVTHNVFDSEFTATKEAYRAGLGback to top mRNA from alignment at P-wetherbeei_contig56220:1..519- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56220.1.1 ID=mRNA_P-wetherbeei_contig56220.1.1|Name=mRNA_P-wetherbeei_contig56220.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56220:1..519- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56220:1..519- >mRNA_P-wetherbeei_contig56220.1.1 ID=mRNA_P-wetherbeei_contig56220.1.1|Name=mRNA_P-wetherbeei_contig56220.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56220:1..519- (Phaeothamnion wetherbeei SAG_119_79)back to top |