mRNA_P-wetherbeei_contig56168.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: UPI001C6A5FE4 (sugar phosphate isomerase/epimerase n=1 Tax=Hoeflea sp. WL0058 TaxID=2865987 RepID=UPI001C6A5FE4) HSP 1 Score: 149 bits (377), Expect = 1.750e-41 Identity = 82/175 (46.86%), Postives = 106/175 (60.57%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWL---EDDPTSTAVLDDLCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
A YWTIAG+V P S E S R AA AGYRG+GL+H+DLV TMR+IL DHDM HVE+E LV W E S +L++LCEAAT LGAR LK D ++ I F+A+CE A+ +G + LEIMP++N+ +++ GL +VAGA GGL+LD
Sbjct: 14 AAYWTIAGDVYP--SAPSEISPHSVVERVEAAAEAGYRGVGLIHADLVHQAGLIGLGTMRNILDDHDMPHVELELLVDWFASGEKKSASNRMLEELCEAATVLGARDLKIAGDYDKTDIDIEKAIESFAAICETAKHSGVKIGLEIMPFSNVATLERGLEIVAGADHEYGGLVLD 186
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: UPI001AC3FA22 (TIM barrel protein n=1 Tax=Actinoplanes toevensis TaxID=571911 RepID=UPI001AC3FA22) HSP 1 Score: 147 bits (370), Expect = 1.640e-40 Identity = 74/172 (43.02%), Postives = 102/172 (59.30%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWLEDDPTSTAVLDDLCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
AT WT AG+ PL P + S + R R AA AG+RG+GL+H DL+ Y +R++L DH + +E+E + GW +P S V DL EAA ALGARH+K PD+ W D F+AL A +AGT V LE +PW+N++++ EGL +V AG GGL++D
Sbjct: 8 ATCWTTAGDASPL--PGDQRSPVPIRERVEAAAAAGFRGLGLLHDDLMPALDGYGSGGLRALLDDHGIVDLELELITGWWNAEPDSDRVRRDLLEAAAALGARHIKVAPDVTDGPWEHDRWAAAFAALAADAAEAGTRVGLEFLPWSNIKTVHEGLGLVRAAGHPAGGLIID 177
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: UPI001942789C (TIM barrel protein n=2 Tax=Actinoplanes tereljensis TaxID=571912 RepID=UPI001942789C) HSP 1 Score: 143 bits (360), Expect = 4.420e-39 Identity = 74/172 (43.02%), Postives = 104/172 (60.47%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWLEDDPTSTAVLDDLCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
AT WT AG PL P + S + R R AAA AG++GIGL+H+DL+ Y +R++L DH + +E+E + GW + S V DL AA ALGARH+K GPD+ W D + F+AL A +AGT V LE +PW+N++++ +GLA+V AG GGL++D
Sbjct: 8 ATCWTTAGAASPL--PGDQRSPVPIRKRVAAASAAGFQGIGLLHADLMPALDQYGSGGLRALLDDHGIVDLELELITGWWSAE--SEPVRRDLLAAAEALGARHIKVGPDVSDGPWEHDRWVAAFAALAAEAAEAGTRVGLEFLPWSNIKTVHDGLALVRAAGHPAGGLIID 175
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: A0A1X9YH99_9SPHN (AP_endonuc_2 domain-containing protein n=1 Tax=Sphingomonas sp. KC8 TaxID=1030157 RepID=A0A1X9YH99_9SPHN) HSP 1 Score: 143 bits (361), Expect = 4.430e-39 Identity = 77/175 (44.00%), Postives = 107/175 (61.14%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWL---EDDPTSTAVLDDLCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
AT WTI GNV+P +S ++ R R AAA AGY GIGL H DL++ R D+A +R + ++H+E+E+L GW E+ S AV DL AA ALGARH+K P WP +I F LC++A + G +ALE++P+++L +++ LAV AGA A NGGLL+D
Sbjct: 9 ATCWTIGGNVVPGTSQHISPFPLEDRVRAAAA--AGYTGIGLWHGDLLRWREGRDYAALRQAIERAGLKHIELEYLAGWFDGGEERRQSDAVRHDLFAAAEALGARHIKVMPPFGNAGWPTTRLIDEFGELCKQAARYGLLIALEMIPYSDLPTLESALAVAAGADADNGGLLVD 181
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: A0A521RAZ5_9GAMM (Sugar phosphate isomerase/epimerase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RAZ5_9GAMM) HSP 1 Score: 142 bits (359), Expect = 7.240e-39 Identity = 72/175 (41.14%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWLEDDPTSTAVLDD---LCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
A+YWT++G LP + + E S DF+ R +A +AG++GIGL H+DL + R+ M+ IL D+ ++H+E+EFL W +D A + L +AA AL ARH+K G D A+ P+DHMI F+ LC+ AGT + E+MP+ N++++ + +A+V GAGA+NGG++ D
Sbjct: 8 ASYWTLSGGALPHT--DHEYSTFDFKDRVVSAAKAGFKGIGLWHADLEYILRTRSLKEMKQILDDNGIEHLELEFLTDWFWEDDRRKASDKNRKMLLDAAEALNARHIKVG-DFSAQPCPMDHMIECFAKLCQEGADAGTRIIFEMMPFANIKTLADTVALVEGAGASNGGIIFD 179
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: UPI001FAE3CD4 (sugar phosphate isomerase/epimerase n=1 Tax=Variovorax sp. CYS-02 TaxID=2923278 RepID=UPI001FAE3CD4) HSP 1 Score: 143 bits (360), Expect = 7.400e-39 Identity = 78/175 (44.57%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWLEDDPTSTA---VLDDLCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
A+YWT+AG+VLP SP Q S F +R AA +AGY G+GLM+ DL R + MR L DH ++H+E+EFL W D A +L AA ALGARH+K G D WPL ++ F+ LCE A + GTA+ LE++PWT L + + L ++ A A+N GLLLD
Sbjct: 12 ASYWTLAGDVLP-RSPSQ-ISPHSFESRVRAAAQAGYTGLGLMNDDLAATTRRMGLSAMRRCLDDHGLRHLELEFLGDWFADSERRAASDRTRAELLAAAQALGARHIKIGGDRYGAHWPLAQLVDSFARLCEEAARHGTAIVLELLPWTQLATPAQALPLLEQAQASNAGLLLD 184
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: A0A7G1PF06_9ACTN (Sugar phosphate isomerase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A7G1PF06_9ACTN) HSP 1 Score: 142 bits (357), Expect = 1.410e-38 Identity = 74/175 (42.29%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWLEDDP---TSTAVLDDLCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
AT WT AG+ P P+ S + R R AA AG++G GL+H DLV+ R+Y + +RS+ D+ + H+E+E LV W D P S AV DL A ALGARHLK GPD++ + W DH F+ L +A G +A+E +PW+NL+++ +GL +V AG GGL++D
Sbjct: 8 ATCWTTAGDAAP-GQPDLR-SPLTLRERVEAAGAAGFKGFGLLHEDLVEAERTYGLSGVRSLFEDNGLVHLELELLVDWWADGPRRAASDAVRLDLLRTAEALGARHLKIGPDVEDRPWEPDHWAEEFATLASQADGVGARLAIEFLPWSNLKTVHDGLRLVETAGHPAGGLIID 180
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: UPI000B5C2D6B (sugar phosphate isomerase/epimerase n=2 Tax=Streptomyces TaxID=1883 RepID=UPI000B5C2D6B) HSP 1 Score: 141 bits (355), Expect = 2.800e-38 Identity = 73/175 (41.71%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWLEDD---PTSTAVLDDLCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
AT WT AG+ P + + S ++ R R AA AG++GIGL+++DLV+ R Y +RS+ D+ + HVE+E L W D S AV DL AA ALGARHLK GPD++ + W LD F+AL +A G + +E +PW+NL+++ +GL +V AG GGL++D
Sbjct: 8 ATCWTTAGDTAP--DRDDQRSPLNLRARAEAAGAAGFKGIGLLYADLVEAEREYGLTGVRSLFEDNGLVHVELELLTDWWADGRRRSASDAVRRDLLRAAEALGARHLKIGPDVEDQPWDLDVWAKEFAALAAQADGVGARLGIEFLPWSNLKTVHDGLRLVEAAGHPAGGLIID 180
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: A0A2Z5MT52_BURPY (Sugar phosphate isomerase/epimerase n=1 Tax=Burkholderia pyrrocinia TaxID=60550 RepID=A0A2Z5MT52_BURPY) HSP 1 Score: 140 bits (354), Expect = 4.050e-38 Identity = 77/175 (44.00%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWLED-DPTSTAVLD--DLCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
A+YWT++G V PL++ E S F R A RAG++G+G +H DLV VR +A+M+ IL + ++ +EVE L W D D + + L+ DL EA ALGAR LK D Q K WP + ++ FS LC A AG V +EIMPW+N S++ + VV AGA NGGL +D
Sbjct: 9 ASYWTVSGTVYPLATTE--VSPFTFEERVETAARAGFKGMGFVHQDLVAVRDRLGYASMKRILDANGIEDIEVEILTDWFADGDRKAQSDLERADLLEAGEALGARALKVSGDHQGKQWPHEVLVKTFSDLCADAGHAGMRVGIEIMPWSNFNSVNGTMEVVRDAGAKNGGLFVD 181
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Match: UPI001B3C9703 (sugar phosphate isomerase/epimerase n=1 Tax=Streptomyces yatensis TaxID=155177 RepID=UPI001B3C9703) HSP 1 Score: 140 bits (353), Expect = 5.570e-38 Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = 1
Query: 1 ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVRRSYDFATMRSILADHDMQHVEVEFLVGWLEDDP---TSTAVLDDLCEAATALGARHLKAGPDMQAKSWPLDHMITRFSALCERARQAGTAVALEIMPWTNLRSIDEGLAVVAGAGAANGGLLLD 516
AT WT AG+ P + S++ R R AA AG+RG GL+H+DLV+ R Y A +RS+ D+ + HVE+E L W P S A+ DL AA ALGARHLK GPD++ + W L+ F+ L +A G + +E +PWTNL+++ +GL +V AG GGL++D
Sbjct: 8 ATCWTTAGDAAPGRGDGR--SSLTLRERAEAAGAAGFRGFGLLHADLVRAEREYGLAGIRSLFEDNGLVHVELELLTDWWARGPRRAASDAIRRDLLRAAEALGARHLKIGPDVEDRPWQLETWAEEFATLAAQADGVGARLGIEFLPWTNLKTLHDGLELVEAAGHPAGGLIID 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56168.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56168.1.1 >prot_P-wetherbeei_contig56168.1.1 ID=prot_P-wetherbeei_contig56168.1.1|Name=mRNA_P-wetherbeei_contig56168.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp ATYWTIAGNVLPLSSPEQEASAIDFRTRCAAAQRAGYRGIGLMHSDLVKVback to top mRNA from alignment at P-wetherbeei_contig56168:2..517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56168.1.1 ID=mRNA_P-wetherbeei_contig56168.1.1|Name=mRNA_P-wetherbeei_contig56168.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig56168:2..517+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56168:2..517+ >mRNA_P-wetherbeei_contig56168.1.1 ID=mRNA_P-wetherbeei_contig56168.1.1|Name=mRNA_P-wetherbeei_contig56168.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig56168:2..517+ (Phaeothamnion wetherbeei SAG_119_79)back to top |