mRNA_P-wetherbeei_contig55521.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Match: UPI001A8EEB44 (hypothetical protein n=1 Tax=Nocardioides sp. S5 TaxID=2017486 RepID=UPI001A8EEB44) HSP 1 Score: 100 bits (249), Expect = 2.640e-25 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1
Query: 1 PRWVQVGVGAVGIAADVASPELAAIYADDAHRDGTVRDALAKGPKVRRG 147
PRWVQVGVGAVGIAADVASPELAAIYADDAHRDGTVRDALAKGPKVRRG
Sbjct: 152 PRWVQVGVGAVGIAADVASPELAAIYADDAHRDGTVRDALAKGPKVRRG 200
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Match: A0A6L6ADF3_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6L6ADF3_9ACTN) HSP 1 Score: 89.0 bits (219), Expect = 8.410e-21 Identity = 43/49 (87.76%), Postives = 44/49 (89.80%), Query Frame = 1
Query: 1 PRWVQVGVGAVGIAADVASPELAAIYADDAHRDGTVRDALAKGPKVRRG 147
PRWVQVGVG VGIAAD PELAA+YADDAHRDGTVRDALAKGPKV RG
Sbjct: 152 PRWVQVGVGVVGIAADQDQPELAALYADDAHRDGTVRDALAKGPKVFRG 200
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Match: UPI001E55BF04 (hypothetical protein n=1 Tax=Nocardioides furvisabuli TaxID=375542 RepID=UPI001E55BF04) HSP 1 Score: 89.0 bits (219), Expect = 8.410e-21 Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 1
Query: 1 PRWVQVGVGAVGIAADVASPELAAIYADDAHRDGTVRDALAKGPKVRRG 147
PRWV+VGVGAVG+AA SP+LAA+YADDAHRDGTVRDALAK PKVRRG
Sbjct: 152 PRWVRVGVGAVGVAAQAESPDLAAVYADDAHRDGTVRDALAKSPKVRRG 200
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Match: A0A4Q2T3S1_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides zhouii TaxID=1168729 RepID=A0A4Q2T3S1_9ACTN) HSP 1 Score: 70.5 bits (171), Expect = 1.150e-13 Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 PRWVQVGVGAVGIAADVASPELAAIYADDAHRDGTVRDALAKGPKVRRG 147
PRWVQVGVGAVG + D ASP+ +YADDAHR G +RD +A GP+VRRG
Sbjct: 150 PRWVQVGVGAVGGSEDPASPDGFTVYADDAHRVGEIRDNIALGPRVRRG 198
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Match: UPI001745E13F (hypothetical protein n=1 Tax=Nocardioides cavernae TaxID=1921566 RepID=UPI001745E13F) HSP 1 Score: 63.5 bits (153), Expect = 5.180e-11 Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 1 PRWVQVGVGAVGIAADVASPELAAIYADDAHRDGTVRDALAKGPKVRRG 147
PRWVQVGVGAV +AA P+ A +ADDA R G +RD +A GPKVRRG
Sbjct: 150 PRWVQVGVGAVAVAALEGQPDEGAAHADDAIRVGEIRDRIALGPKVRRG 198
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Match: UPI00131F3CB9 (hypothetical protein n=1 Tax=Nocardioides terrigena TaxID=424797 RepID=UPI00131F3CB9) HSP 1 Score: 57.0 bits (136), Expect = 1.740e-8 Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 1 PRWVQVGVGAVGIAADVASP--ELAAIYADDAHRDGTVRDAL-AKGPKVRRG 147
PRWVQVG G + A+ E ++ADDAHR GTVRD + AKGPKVRRG
Sbjct: 155 PRWVQVGAGVASLETVAAADGTEQIVVFADDAHRAGTVRDEIVAKGPKVRRG 206
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Match: A0A0Q9TM18_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides sp. Soil805 TaxID=1736416 RepID=A0A0Q9TM18_9ACTN) HSP 1 Score: 55.5 bits (132), Expect = 6.540e-8 Identity = 32/54 (59.26%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 1 PRWVQVGVGAVGI----AADVASPELAAIYADDAHRDGTVRDA-LAKGPKVRRG 147
PRWVQVGVG + AAD A E ++ADDAHR GT+ D L KGPKVRRG
Sbjct: 154 PRWVQVGVGVASLETVTAADGA--EQVVVFADDAHRAGTISDENLTKGPKVRRG 205
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Match: UPI000D30B61F (hypothetical protein n=1 Tax=Nocardioides sediminis TaxID=433648 RepID=UPI000D30B61F) HSP 1 Score: 54.7 bits (130), Expect = 1.290e-7 Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 1 PRWVQVGVGAVGIAADVASP--ELAAIYADDAHRDGTVRDA-LAKGPKVRRG 147
PRWVQVG G + A+ E ++ADDAHR GT+ D LAKGPKVRRG
Sbjct: 155 PRWVQVGAGIASLETVAAADGTEQVVVFADDAHRAGTIGDENLAKGPKVRRG 206
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Match: A0A0Q9R9K1_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides sp. Soil777 TaxID=1736409 RepID=A0A0Q9R9K1_9ACTN) HSP 1 Score: 53.1 bits (126), Expect = 4.850e-7 Identity = 30/54 (55.56%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 1 PRWVQVGVGAVGI----AADVASPELAAIYADDAHRDGTVRDA-LAKGPKVRRG 147
PRWVQVG G + AAD A ++ ++ADDAHR GT+ D L KGPKVRRG
Sbjct: 155 PRWVQVGAGIASLETVTAADGAEQDV--VFADDAHRAGTIGDDNLTKGPKVRRG 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55521.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55521.1.1 >prot_P-wetherbeei_contig55521.1.1 ID=prot_P-wetherbeei_contig55521.1.1|Name=mRNA_P-wetherbeei_contig55521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=50bp PRWVQVGVGAVGIAADVASPELAAIYADDAHRDGTVRDALAKGPKVRRG*back to top mRNA from alignment at P-wetherbeei_contig55521:3..152+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55521.1.1 ID=mRNA_P-wetherbeei_contig55521.1.1|Name=mRNA_P-wetherbeei_contig55521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=150bp|location=Sequence derived from alignment at P-wetherbeei_contig55521:3..152+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55521:3..152+ >mRNA_P-wetherbeei_contig55521.1.1 ID=mRNA_P-wetherbeei_contig55521.1.1|Name=mRNA_P-wetherbeei_contig55521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=150bp|location=Sequence derived from alignment at P-wetherbeei_contig55521:3..152+ (Phaeothamnion wetherbeei SAG_119_79)back to top |