mRNA_P-wetherbeei_contig5536.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A067R9D5_ZOONE (Uncharacterized protein n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R9D5_ZOONE) HSP 1 Score: 62.4 bits (150), Expect = 2.870e-8 Identity = 39/117 (33.33%), Postives = 58/117 (49.57%), Query Frame = 3
Query: 177 VVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDA---GPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDSGKPFL 518
+VPN+IH G +S DF L+I+ + VQ+PE V+ H+ TV + V+S+ P G P +S Y H SD+ R++VL++ GGIYID+ L
Sbjct: 51 IVPNVIHFILFGQNSLDFVSFLSILSALKVQQPEIVYIHSDAEKFGGHYWTVLQTLSFPNTSLVLSYRPRPTHVFGQPLSSVY--------HASDVARIQVLMECGGIYIDADTLIL 159
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI000CD7B94A (uncharacterized protein LOC111872338 n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=UPI000CD7B94A) HSP 1 Score: 62.0 bits (149), Expect = 3.900e-8 Identity = 38/116 (32.76%), Postives = 59/116 (50.86%), Query Frame = 3
Query: 165 TPRPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDA---GPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDS 503
T +VPN+IH G +S +F L+I+ + VQ+PE V+ H+ + TV + V+S+ P G P +S Y H SD+ R++VL++ GGIYID+
Sbjct: 47 TEEIIVPNVIHFILFGQNSLEFVSFLSILSALKVQQPEVVYVHSDAEEFGGHYWTVLQTLSFPNTSLVLSYRPRPTHVFGQPLSSIY--------HASDVARIQVLMECGGIYIDA 154
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A293LHU9_ORNER (Uncharacterized protein (Fragment) n=2 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LHU9_ORNER) HSP 1 Score: 58.5 bits (140), Expect = 6.440e-7 Identity = 37/117 (31.62%), Postives = 60/117 (51.28%), Query Frame = 3
Query: 174 PVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFH-NLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLM-LQHKSDLLRVRVLLQWGGIYIDSGKPFL 518
P++PN++H +GN S F EV+ I QRP +++ H ++ V G + FVD + + P G L + H SD+LR+++LLQ+GGI++D G +L
Sbjct: 68 PIIPNVVHFVHLGNASLSFVEVVCIRAAWIQQRPSKLWIHCDMCSSVRGGS-------YWAFVDSIPGLELRNVRRPRY--VFGKRLSSIYHASDILRLKILLQYGGIFLD-GDSYL 174
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A7R9LND3_9ACAR (Hypothetical protein n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9LND3_9ACAR) HSP 1 Score: 55.1 bits (131), Expect = 1.440e-5 Identity = 32/115 (27.83%), Postives = 54/115 (46.96%), Query Frame = 3
Query: 168 PRPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFH----NLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYID 500
P +VPNI+H H +F L+I+ + QRP+ ++ H L G + +A + + G P ++ Y + H SD+ R+RVL+++GGIY+D
Sbjct: 33 PDKIVPNIVHYVLFTIHRIEFAHFLSIVSALRNQRPDIIYIHCDCHELEGQYFKRTLNIAHSINTRIIVRQIEKPTKIFGRPLSTDY-----LDWHASDVTRIRVLMEFGGIYLD 142
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI001EE5FAAE (uncharacterized protein LOC124262100 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5FAAE) HSP 1 Score: 54.7 bits (130), Expect = 1.660e-5 Identity = 31/114 (27.19%), Postives = 58/114 (50.88%), Query Frame = 3
Query: 171 RPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGT----VARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYID 500
+ ++PNI+H + G+ FF L+++ ++VQ+ E+++ H E +GT V + F+ H S + + + H SD++RV VLL++GG+Y+D
Sbjct: 298 KDLIPNIVHYVWFGDKDMTFFNQLSLLSSLYVQKAEKIYIHGN----KEPKGTYWDEVKDLPQVKFISREFPH----------SVFGNEVKVPSHASDVVRVDVLLRYGGVYLD 397
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI0008F992B1 (uncharacterized protein LOC109037202 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F992B1) HSP 1 Score: 53.9 bits (128), Expect = 2.580e-5 Identity = 30/116 (25.86%), Postives = 52/116 (44.83%), Query Frame = 3
Query: 156 EQATPRPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDS 503
E P+VPNI+H + F + ++ + QRP+R++FH V G + F + +V H + + H D+ R+RVL+Q+GGI++D+
Sbjct: 71 ETGADHPIVPNIVHFILFEDPQMSFVHFVCVLAALRNQRPDRIYFHTNVAP--SGNYWERLLKLGPFTERLVLRH-MEMPTEIFHQRIRPRWRVFHGGDIARIRVLMQYGGIFLDN 183
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A7M7KHW6_VARDE (Uncharacterized protein n=4 Tax=Varroa TaxID=62624 RepID=A0A7M7KHW6_VARDE) HSP 1 Score: 53.9 bits (128), Expect = 2.750e-5 Identity = 37/111 (33.33%), Postives = 56/111 (50.45%), Query Frame = 3
Query: 174 PVVPNIIHTTFIGNHSP-DFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDS 503
P+VPNIIH IGN S F E++ I Q+PER+ H D + +++ ++ V P+ SS L H SD+LR+R+L ++GGIY+D+
Sbjct: 82 PIVPNIIHFIKIGNKSDLTFEELVCIKAAWLAQKPERILIHCDYCDYLKSGKYWSQVTRIPNLNLVPVSVPTHVWGRKLSS-------LHHASDVLRIRILQRYGGIYLDT 185
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI0008F9A729 (uncharacterized protein LOC109030304 isoform X1 n=3 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9A729) HSP 1 Score: 53.1 bits (126), Expect = 4.790e-5 Identity = 31/116 (26.72%), Postives = 53/116 (45.69%), Query Frame = 3
Query: 156 EQATPRPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDS 503
E +VPNI+H + F + I+ + QRPE+++FH G+VA G R+ E + + + + H D+ R+RVL+++GGI++DS
Sbjct: 74 ETGAAELIVPNIVHFVLFEDPKISFMHFVCILAALRNQRPEKIYFH---GNVAPSGGYWERLMKLEPFTERLEMRRVELPTEISGVKIQPGWRIFHGGDVTRIRVLMEYGGIFLDS 186
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI001F5F1304 (uncharacterized protein LOC124798673 n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5F1304) HSP 1 Score: 52.8 bits (125), Expect = 5.930e-5 Identity = 37/116 (31.90%), Postives = 58/116 (50.00%), Query Frame = 3
Query: 171 RPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGT----VARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLM-LQHKSDLLRVRVLLQWGGIYIDS 503
+ VPNI+H G S DF L+I+ + VQ+PE++ H+ D + EG + FN S H S P + G L + H +D+ R+++L+Q GGIY+D+
Sbjct: 43 KDCVPNIVHYIIFGKKSLDFISYLSILSVLKVQKPEQLIIHS---DSPDFEGNYWLAIKSAPFND-----TSIHVSLLEQPTH--VFGQRLSSVYHSADVARIQILMQHGGIYLDT 148
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A8B8BE66_CRAVI (uncharacterized protein LOC111109465 isoform X1 n=5 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BE66_CRAVI) HSP 1 Score: 52.4 bits (124), Expect = 9.770e-5 Identity = 37/115 (32.17%), Postives = 62/115 (53.91%), Query Frame = 3
Query: 177 VVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLM-LQHKSDLLRVRVLLQWGGIYIDSGKPFL 518
VVPNI+H + GN +F ++I QRP +F + + + GE + V+ V + + PP S SG+ ++ +QHKSD+LR+ +L ++GGIY+D+ + L
Sbjct: 220 VVPNIVHFIWFGNLKFEFIYFVSIYSVSKYQRPCIIFLYYDI--LPSGEW------WTLLVNSVPNIILVNVSPP--SQISGEKIIYVQHKSDILRLLILNEYGGIYLDTDQLLL 324 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5536.1.1 >prot_P-wetherbeei_contig5536.1.1 ID=prot_P-wetherbeei_contig5536.1.1|Name=mRNA_P-wetherbeei_contig5536.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp MWGQRLALLVVLVGAMLVIQAQELVEQATPRPVVPNIIHTTFIGNHSPDFback to top mRNA from alignment at P-wetherbeei_contig5536:2749..3418- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5536.1.1 ID=mRNA_P-wetherbeei_contig5536.1.1|Name=mRNA_P-wetherbeei_contig5536.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=670bp|location=Sequence derived from alignment at P-wetherbeei_contig5536:2749..3418- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5536:2749..3418- >mRNA_P-wetherbeei_contig5536.1.1 ID=mRNA_P-wetherbeei_contig5536.1.1|Name=mRNA_P-wetherbeei_contig5536.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig5536:2749..3418- (Phaeothamnion wetherbeei SAG_119_79)back to top |