mRNA_P-wetherbeei_contig5536.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5536.1.1
Unique NamemRNA_P-wetherbeei_contig5536.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A067R9D5_ZOONE (Uncharacterized protein n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R9D5_ZOONE)

HSP 1 Score: 62.4 bits (150), Expect = 2.870e-8
Identity = 39/117 (33.33%), Postives = 58/117 (49.57%), Query Frame = 3
Query:  177 VVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDA---GPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDSGKPFL 518
            +VPN+IH    G +S DF   L+I+  + VQ+PE V+ H+          TV +         V+S+ P      G P +S Y        H SD+ R++VL++ GGIYID+    L
Sbjct:   51 IVPNVIHFILFGQNSLDFVSFLSILSALKVQQPEIVYIHSDAEKFGGHYWTVLQTLSFPNTSLVLSYRPRPTHVFGQPLSSVY--------HASDVARIQVLMECGGIYIDADTLIL 159          
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI000CD7B94A (uncharacterized protein LOC111872338 n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=UPI000CD7B94A)

HSP 1 Score: 62.0 bits (149), Expect = 3.900e-8
Identity = 38/116 (32.76%), Postives = 59/116 (50.86%), Query Frame = 3
Query:  165 TPRPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDA---GPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDS 503
            T   +VPN+IH    G +S +F   L+I+  + VQ+PE V+ H+   +      TV +         V+S+ P      G P +S Y        H SD+ R++VL++ GGIYID+
Sbjct:   47 TEEIIVPNVIHFILFGQNSLEFVSFLSILSALKVQQPEVVYVHSDAEEFGGHYWTVLQTLSFPNTSLVLSYRPRPTHVFGQPLSSIY--------HASDVARIQVLMECGGIYIDA 154          
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A293LHU9_ORNER (Uncharacterized protein (Fragment) n=2 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LHU9_ORNER)

HSP 1 Score: 58.5 bits (140), Expect = 6.440e-7
Identity = 37/117 (31.62%), Postives = 60/117 (51.28%), Query Frame = 3
Query:  174 PVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFH-NLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLM-LQHKSDLLRVRVLLQWGGIYIDSGKPFL 518
            P++PN++H   +GN S  F EV+ I      QRP +++ H ++   V  G        +  FVD +      +   P      G  L  + H SD+LR+++LLQ+GGI++D G  +L
Sbjct:   68 PIIPNVVHFVHLGNASLSFVEVVCIRAAWIQQRPSKLWIHCDMCSSVRGGS-------YWAFVDSIPGLELRNVRRPRY--VFGKRLSSIYHASDILRLKILLQYGGIFLD-GDSYL 174          
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A7R9LND3_9ACAR (Hypothetical protein n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9LND3_9ACAR)

HSP 1 Score: 55.1 bits (131), Expect = 1.440e-5
Identity = 32/115 (27.83%), Postives = 54/115 (46.96%), Query Frame = 3
Query:  168 PRPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFH----NLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYID 500
            P  +VPNI+H      H  +F   L+I+  +  QRP+ ++ H     L G   +    +A       +   +       G P ++ Y     +  H SD+ R+RVL+++GGIY+D
Sbjct:   33 PDKIVPNIVHYVLFTIHRIEFAHFLSIVSALRNQRPDIIYIHCDCHELEGQYFKRTLNIAHSINTRIIVRQIEKPTKIFGRPLSTDY-----LDWHASDVTRIRVLMEFGGIYLD 142          
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI001EE5FAAE (uncharacterized protein LOC124262100 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5FAAE)

HSP 1 Score: 54.7 bits (130), Expect = 1.660e-5
Identity = 31/114 (27.19%), Postives = 58/114 (50.88%), Query Frame = 3
Query:  171 RPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGT----VARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYID 500
            + ++PNI+H  + G+    FF  L+++  ++VQ+ E+++ H       E +GT    V  +    F+     H          S +  +  +  H SD++RV VLL++GG+Y+D
Sbjct:  298 KDLIPNIVHYVWFGDKDMTFFNQLSLLSSLYVQKAEKIYIHGN----KEPKGTYWDEVKDLPQVKFISREFPH----------SVFGNEVKVPSHASDVVRVDVLLRYGGVYLD 397          
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI0008F992B1 (uncharacterized protein LOC109037202 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F992B1)

HSP 1 Score: 53.9 bits (128), Expect = 2.580e-5
Identity = 30/116 (25.86%), Postives = 52/116 (44.83%), Query Frame = 3
Query:  156 EQATPRPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDS 503
            E     P+VPNI+H     +    F   + ++  +  QRP+R++FH  V     G      +    F + +V  H  +               + H  D+ R+RVL+Q+GGI++D+
Sbjct:   71 ETGADHPIVPNIVHFILFEDPQMSFVHFVCVLAALRNQRPDRIYFHTNVAP--SGNYWERLLKLGPFTERLVLRH-MEMPTEIFHQRIRPRWRVFHGGDIARIRVLMQYGGIFLDN 183          
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A7M7KHW6_VARDE (Uncharacterized protein n=4 Tax=Varroa TaxID=62624 RepID=A0A7M7KHW6_VARDE)

HSP 1 Score: 53.9 bits (128), Expect = 2.750e-5
Identity = 37/111 (33.33%), Postives = 56/111 (50.45%), Query Frame = 3
Query:  174 PVVPNIIHTTFIGNHSP-DFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDS 503
            P+VPNIIH   IGN S   F E++ I      Q+PER+  H    D  +     +++     ++ V    P+       SS       L H SD+LR+R+L ++GGIY+D+
Sbjct:   82 PIVPNIIHFIKIGNKSDLTFEELVCIKAAWLAQKPERILIHCDYCDYLKSGKYWSQVTRIPNLNLVPVSVPTHVWGRKLSS-------LHHASDVLRIRILQRYGGIYLDT 185          
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI0008F9A729 (uncharacterized protein LOC109030304 isoform X1 n=3 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9A729)

HSP 1 Score: 53.1 bits (126), Expect = 4.790e-5
Identity = 31/116 (26.72%), Postives = 53/116 (45.69%), Query Frame = 3
Query:  156 EQATPRPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDS 503
            E      +VPNI+H     +    F   + I+  +  QRPE+++FH   G+VA   G   R+       E +     +     +         + H  D+ R+RVL+++GGI++DS
Sbjct:   74 ETGAAELIVPNIVHFVLFEDPKISFMHFVCILAALRNQRPEKIYFH---GNVAPSGGYWERLMKLEPFTERLEMRRVELPTEISGVKIQPGWRIFHGGDVTRIRVLMEYGGIFLDS 186          
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: UPI001F5F1304 (uncharacterized protein LOC124798673 n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5F1304)

HSP 1 Score: 52.8 bits (125), Expect = 5.930e-5
Identity = 37/116 (31.90%), Postives = 58/116 (50.00%), Query Frame = 3
Query:  171 RPVVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGT----VARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLM-LQHKSDLLRVRVLLQWGGIYIDS 503
            +  VPNI+H    G  S DF   L+I+  + VQ+PE++  H+   D  + EG     +    FN       S H S    P +    G  L  + H +D+ R+++L+Q GGIY+D+
Sbjct:   43 KDCVPNIVHYIIFGKKSLDFISYLSILSVLKVQKPEQLIIHS---DSPDFEGNYWLAIKSAPFND-----TSIHVSLLEQPTH--VFGQRLSSVYHSADVARIQILMQHGGIYLDT 148          
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Match: A0A8B8BE66_CRAVI (uncharacterized protein LOC111109465 isoform X1 n=5 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BE66_CRAVI)

HSP 1 Score: 52.4 bits (124), Expect = 9.770e-5
Identity = 37/115 (32.17%), Postives = 62/115 (53.91%), Query Frame = 3
Query:  177 VVPNIIHTTFIGNHSPDFFEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHHPSDAGPPANSSYSGDNLM-LQHKSDLLRVRVLLQWGGIYIDSGKPFL 518
            VVPNI+H  + GN   +F   ++I      QRP  +F +  +  +  GE       +   V+ V +    +  PP  S  SG+ ++ +QHKSD+LR+ +L ++GGIY+D+ +  L
Sbjct:  220 VVPNIVHFIWFGNLKFEFIYFVSIYSVSKYQRPCIIFLYYDI--LPSGEW------WTLLVNSVPNIILVNVSPP--SQISGEKIIYVQHKSDILRLLILNEYGGIYLDTDQLLL 324          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5536.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A067R9D5_ZOONE2.870e-833.33Uncharacterized protein n=1 Tax=Zootermopsis nevad... [more]
UPI000CD7B94A3.900e-832.76uncharacterized protein LOC111872338 n=1 Tax=Crypt... [more]
A0A293LHU9_ORNER6.440e-731.62Uncharacterized protein (Fragment) n=2 Tax=Ornitho... [more]
A0A7R9LND3_9ACAR1.440e-527.83Hypothetical protein n=1 Tax=Oppiella nova TaxID=3... [more]
UPI001EE5FAAE1.660e-527.19uncharacterized protein LOC124262100 n=1 Tax=Halio... [more]
UPI0008F992B12.580e-525.86uncharacterized protein LOC109037202 n=1 Tax=Bemis... [more]
A0A7M7KHW6_VARDE2.750e-533.33Uncharacterized protein n=4 Tax=Varroa TaxID=62624... [more]
UPI0008F9A7294.790e-526.72uncharacterized protein LOC109030304 isoform X1 n=... [more]
UPI001F5F13045.930e-531.90uncharacterized protein LOC124798673 n=2 Tax=Schis... [more]
A0A8B8BE66_CRAVI9.770e-532.17uncharacterized protein LOC111109465 isoform X1 n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5536contigP-wetherbeei_contig5536:2749..3418 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog136037.KDR15120
PFAMsGly_transf_sug
Model size542
Max annot lvl33208|Metazoa
Hectar predicted targeting categorysignal peptide
Exons2
Evalue2.46e-09
EggNOG OGs2BFTC@1|root,2S17S@2759|Eukaryota,39MPG@33154|Opisthokonta,3BS19@33208|Metazoa,3D87K@33213|Bilateria,41ZIU@6656|Arthropoda
DescriptionGlycosyltransferase sugar-binding region containing DXD motif
Cds size462
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186825.064231-CDS-P-wetherbeei_contig5536:2748..29701683186825.064231-CDS-P-wetherbeei_contig5536:2748..2970Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5536 2749..2970 -
1683186825.0736156-CDS-P-wetherbeei_contig5536:3098..33381683186825.0736156-CDS-P-wetherbeei_contig5536:3098..3338Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5536 3099..3338 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186825.0815463-UTR-P-wetherbeei_contig5536:3338..34181683186825.0815463-UTR-P-wetherbeei_contig5536:3338..3418Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5536 3339..3418 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5536.1.1prot_P-wetherbeei_contig5536.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5536 2749..3338 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5536.1.1

>prot_P-wetherbeei_contig5536.1.1 ID=prot_P-wetherbeei_contig5536.1.1|Name=mRNA_P-wetherbeei_contig5536.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
MWGQRLALLVVLVGAMLVIQAQELVEQATPRPVVPNIIHTTFIGNHSPDF
FEVLAIMLGVFVQRPERVFFHNLVGDVAEGEGTVARMCFNHFVDEVVSHH
PSDAGPPANSSYSGDNLMLQHKSDLLRVRVLLQWGGIYIDSGKPFLSIFT
AGLT
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mRNA from alignment at P-wetherbeei_contig5536:2749..3418-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5536.1.1 ID=mRNA_P-wetherbeei_contig5536.1.1|Name=mRNA_P-wetherbeei_contig5536.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=670bp|location=Sequence derived from alignment at P-wetherbeei_contig5536:2749..3418- (Phaeothamnion wetherbeei SAG_119_79)
GTACGAGAGTCCCCGAGTTGGAAAACTTTCCAGGCTGCCTCTTTCGGCAT CGCCACGTGCTCTAAACATAGTTTTCTGTCATGTGGGGACAACGGTTAGC GTTGCTTGTTGTGCTCGTCGGCGCAATGCTGGTCATCCAAGCACAAGAAC TTGTCGAACAGGCAACGCCGCGCCCGGTTGTACCAAATATCATTCACACG ACGTTCATCGGCAATCATTCACCGGACTTCTTCGAAGTCCTCGCGATCAT GCTGGGTGTTTTTGTCCAACGACCGGAAAGAGTTTTCTTTCACAACTTAG TTGGAGATGTCGCAGAAGGGGTGAGTCGCTCTCACTTACCGGCAGCTCAC ACTTTCGTTACCCTCTTTGTCAGTACGCTTCTACTCTAGCGACTATAACA TAAACGGAGAAAGCTAAAGGCGTCGACGATAATCGTCCCCCACGGCAGGA AGGGACCGTTGCGAGAATGTGTTTCAACCATTTCGTGGACGAAGTTGTGA GCCATCATCCTTCCGATGCAGGCCCGCCAGCCAATTCATCGTACAGCGGA GACAATCTTATGCTGCAGCACAAGAGCGACTTGTTAAGGGTCCGTGTCCT GCTTCAATGGGGCGGCATCTACATTGACTCCGGTAAACCATTTTTGTCCA TATTTACTGCTGGGTTGACT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5536:2749..3418-

>mRNA_P-wetherbeei_contig5536.1.1 ID=mRNA_P-wetherbeei_contig5536.1.1|Name=mRNA_P-wetherbeei_contig5536.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig5536:2749..3418- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGGGACAACGGTTAGCGTTGCTTGTTGTGCTCGTCGGCGCAATGCT
GGTCATCCAAGCACAAGAACTTGTCGAACAGGCAACGCCGCGCCCGGTTG
TACCAAATATCATTCACACGACGTTCATCGGCAATCATTCACCGGACTTC
TTCGAAGTCCTCGCGATCATGCTGGGTGTTTTTGTCCAACGACCGGAAAG
AGTTTTCTTTCACAACTTAGTTGGAGATGTCGCAGAAGGGGAAGGGACCG
TTGCGAGAATGTGTTTCAACCATTTCGTGGACGAAGTTGTGAGCCATCAT
CCTTCCGATGCAGGCCCGCCAGCCAATTCATCGTACAGCGGAGACAATCT
TATGCTGCAGCACAAGAGCGACTTGTTAAGGGTCCGTGTCCTGCTTCAAT
GGGGCGGCATCTACATTGACTCCGGTAAACCATTTTTGTCCATATTTACT
GCTGGGTTGACT
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