mRNA_P-wetherbeei_contig5515.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: D7FRA6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA6_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.900e-30 Identity = 71/174 (40.80%), Postives = 105/174 (60.34%), Query Frame = 1
Query: 346 PVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRGN-RELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDPRTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDESVLRRCLVVGYFSNAAQLGHDGR 864
PV + L ++W FGC E+ALTVAAML+VQ+PF++PRG RE R RV +A+ FA + GDH+TYL V+++F+ + + +C+E+CL++ A+ RA E+R QL R+ ++ PP + + SCG D + LRRCLV G+F+N A+L DGR
Sbjct: 490 PVEPCLAKFLASAWDFGCVEDALTVAAMLSVQNPFVHPRGGGRERRERVREAMEEFAVTEGDHITYLNVFNSFDETGNDSEWCKENCLNHRALVRAGEIRQQLSRYCKKFAPPGQH---------------------------VSSCGDDVNALRRCLVAGFFANVAKLSPDGR 636
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: A0A1V9Z7Z4_9STRA (Pre-mRNA-splicing factor ATP-dependent RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7Z4_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.790e-29 Identity = 70/168 (41.67%), Postives = 95/168 (56.55%), Query Frame = 1
Query: 346 PVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRGNRELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDPRTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDESVLRRCLVVGYFSNAAQL 849
PV ++L AS+ FGCTEEALTVA ML+V+ F+NPRG++E + +V + I FAH GDH TY +Y F + R +C+EHCLSY + RA E+R QL R+V+R G +K + SCG + L RC+V GYF+NAA+L
Sbjct: 453 PVDPFLSRMLLASFDFGCTEEALTVACMLSVEDVFINPRGSKERKAKVAECIADFAHPQGDHWTYFKIYTEFIENDANRQWCDEHCLSYRILVRAMEIRKQLLRYVKRFGSQDK---------------------------RIQSCGENPESLLRCIVAGYFANAAKL 593
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: A0A067CAK9_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CAK9_SAPPC) HSP 1 Score: 127 bits (320), Expect = 1.750e-28 Identity = 69/168 (41.07%), Postives = 97/168 (57.74%), Query Frame = 1
Query: 346 PVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRGNRELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDPRTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDESVLRRCLVVGYFSNAAQL 849
PV ++L AS+ F CTEEAL+VA+ML+V+ FLNPRG++E + +V + I FAH+ GDH TYL +Y F + R +C+EHCL+Y + RA E+R QL R+V+R G EK + SCG + L +C+V GYF+NAA+L
Sbjct: 463 PVDPFLSRMLLASFDFKCTEEALSVASMLSVEDVFLNPRGSKERKAKVAECIAEFAHAQGDHWTYLKIYTEFIENDMTRQWCDEHCLNYRILVRAMEIRKQLLRYVKRFGSDEK---------------------------RILSCGANPEPLLQCVVAGYFANAAKL 603
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: A0A835Z495_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z495_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.160e-28 Identity = 80/188 (42.55%), Postives = 101/188 (53.72%), Query Frame = 1
Query: 343 IPVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRG-NRELRLRVDDAIRHFAHSTGDHMTYLAVYDAF-----ELSVDP-RTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDESVLRRCLVVGYFSNAAQLGHDGR*TSELEG 885
+P+ +VL ASW FGC EALTVAAML+V+ PF PRG E + R A+ FA GDH+TY+ VY+A+ SVD R +C EHCL ++ RARE+R QL R+ R PP+ D R LPS G D + RCLV G+FSNAA+L DGR + EG
Sbjct: 444 LPLSPQLAKVLVASWRFGCVAEALTVAAMLSVRGPFERPRGVGAEAKQRQRSAMAAFATLEGDHITYINVYNAYCDEADGGSVDELREWCAEHCLDARSLRRAREIRGQLERYARLHAPPDHDNDLPVSKQQL---------------RGLPSAGSDMKAVLRCLVSGFFSNAARLSSDGRYRTVREG 616
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: A0A024UEE4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UEE4_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.490e-27 Identity = 63/168 (37.50%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 346 PVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRGNRELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDPRTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDESVLRRCLVVGYFSNAAQL 849
PV ++L AS+ FGCTEEALT+A+M++V F++PR ++E +L++ +A+ FAH GDH+TYL +Y+ F + R++C+EHCL++ + RA E+R QL R+V+R + A+ SCG D+ + +CLV G+F+NAA+L
Sbjct: 458 PVDPCLSKMLLASFDFGCTEEALTIASMVSVDDIFIHPRASKERQLKLKEAVAEFAHQQGDHITYLHIYNEFLENDCSRSWCDEHCLNHRILMRATEIRKQLHRYVKRFATADN---------------------------AIHSCGDDKQPVLQCLVAGFFANAAKL 598
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: A0A485KLE7_9STRA (Aste57867_8807 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLE7_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.910e-25 Identity = 62/181 (34.25%), Postives = 100/181 (55.25%), Query Frame = 1
Query: 346 PVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRGNRELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDPRTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDESVLRRCLVVGYFSNAAQLGHDGR*TSELEGK 888
PV ++L AS+ FGCTEEALT+A+M++V F+NPR ++E + ++ + + FAH GDH+TYL +Y+ F + R++C+EH L + + RA E+R QL R+V+R ++ SCGG+ + +CLV G+F+NAA+L G + +G+
Sbjct: 462 PVDPFLSKMLLASFEFGCTEEALTIASMVSVDDIFINPRNSKERQAKLKECVAEFAHQQGDHITYLHIYNEFIENDASRSWCDEHYLHHRILVRATEIRKQLHRYVKRFAT---------------------------NGASIQSCGGNNQAVLQCLVAGFFANAAKLHGSGTYRTIKDGR 615
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: A0A6G0WKA1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WKA1_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.070e-24 Identity = 59/168 (35.12%), Postives = 96/168 (57.14%), Query Frame = 1
Query: 346 PVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRGNRELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDPRTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDESVLRRCLVVGYFSNAAQL 849
PV ++L +S+ FGCTEEALT+A+M++V F+NPR ++E + ++ + + FAH GDH+TYL +Y+ F + R++C+EHCL++ + RA E+R QL R+V+R + + SCG + + +CLV G+F+NAA+L
Sbjct: 460 PVDPFLSKMLLSSFDFGCTEEALTIASMVSVDDIFINPRASKERQAKLKECVAEFAHQQGDHITYLHIYNEFIENDASRSWCDEHCLNHRILLRATEIRKQLHRYVKRFASATD--------------------------KTIQSCGDNVKPVLQCLVAGFFANAAKL 601
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: A0A0P1AZ29_PLAHL (Probable atp-dependent rna helicase dhx35-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZ29_PLAHL) HSP 1 Score: 115 bits (289), Expect = 2.040e-24 Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1
Query: 346 PVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRGNRELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDPRTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDE-----SVLRRCLVVGYFSNAAQLGHDG 861
PV +VL AS+ F CT E +++A++L+V F+NPRG++E + ++ A++HFAH GDHMTY+++Y+ F + R +C+E+ LSY A+ RA E+R L ++V R P + + SC DE + +RRCLV GYF+NAA+L DG
Sbjct: 499 PVAPTLAKVLLASFRFSCTHEMVSIASVLSVGDLFMNPRGSKERQEQLAQALKHFAHPDGDHMTYISIYNEFVENNKSRAWCDENLLSYRALVRATEIRRHLRQYVTRFKPIDINREDEIMSLNS-------------------SCNEDEDKARSAKIRRCLVTGYFANAAKLHADG 656
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: A0A662XI26_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XI26_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.680e-23 Identity = 69/177 (38.98%), Postives = 95/177 (53.67%), Query Frame = 1
Query: 346 PVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRGNRELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDPRTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDES-----VLRRCLVVGYFSNAAQLGHDG 861
PV +VL +S+ F CT E L +A++L+V FL+ RG+RE + +V +A+ HFA GDH+ YLA+YDAFE S R +C+E+ LSY A++RA E+R L R+V R L S GDE +R+CLV GYF+NAA+L DG
Sbjct: 509 PVAPALAKVLLSSFRFECTREILRIASILSVGDVFLSGRGSRERKEKVAEAMEHFARPEGDHLMYLAIYDAFEESGKSRAWCDEYMLSYRALSRALEIRRHLKRYVARF---------------QTLSGRSPTGDGADLQWRLDSSDGDEDKARSIAIRKCLVSGYFANAAKLHADG 670
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Match: A0A6V1PNS9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PNS9_HETAK) HSP 1 Score: 109 bits (272), Expect = 2.070e-23 Identity = 58/184 (31.52%), Postives = 103/184 (55.98%), Query Frame = 1
Query: 343 IPVVELEGQVLTASWSFGCTEEALTVAAMLTVQHPFLNPRGNRELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDPRTFCEEHCLSYPAMARARELRAQLWRHVRRLGPPEKDXXXXXXXXXXXXXXXXXXXXXXXXTRALPSCGGDESVLRRCLVVGYFSNAAQLGHDGR*TSELEGKDI 894
+P + + L +S+ F CTEE LT+AAM++VQ+ F++P+ +++LR ++++A+ FA GDH+TYL VY+ + +C E+C++ PA+A+A +RAQL R++ L +++ SC GD +++ LV G+FS AA++G DG+ + G ++
Sbjct: 93 MPTEPMIAKALISSYDFECTEEMLTIAAMVSVQNIFIHPKNSKDLREKLEEAMGQFAVREGDHVTYLNVYEDYAGGGGDPEWCAEYCVNRPALAKAVHIRAQLKRYLEML----------------------------CKEKSIQSCQGDIQKIQKALVAGFFSQAARIGPDGKYRTVRNGTEV 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5515.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5515.2.1 >prot_P-wetherbeei_contig5515.2.1 ID=prot_P-wetherbeei_contig5515.2.1|Name=mRNA_P-wetherbeei_contig5515.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp MLTVQHPFLNPRGNRELRLRVDDAIRHFAHSTGDHMTYLAVYDAFELSVDback to top mRNA from alignment at P-wetherbeei_contig5515:1131..2535+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5515.2.1 ID=mRNA_P-wetherbeei_contig5515.2.1|Name=mRNA_P-wetherbeei_contig5515.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1405bp|location=Sequence derived from alignment at P-wetherbeei_contig5515:1131..2535+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5515:1131..2535+ >mRNA_P-wetherbeei_contig5515.2.1 ID=mRNA_P-wetherbeei_contig5515.2.1|Name=mRNA_P-wetherbeei_contig5515.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig5515:1131..2535+ (Phaeothamnion wetherbeei SAG_119_79)back to top |