mRNA_P-wetherbeei_contig54949.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: A0A3G5FPN5_9PHAE (Ribosomal protein S11 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPN5_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.440e-61 Identity = 91/122 (74.59%), Postives = 109/122 (89.34%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMKN 366
IYIKST N+FCTLMDV++KKVKTSCS KVP Y+NEFNE+ NP+KRG LLGE+FG KT ELGFTEV I+LDS++N+ RKGF+ G+K+IKISFIQLSKAYPHNGCRPSK+RRKK+RTK+K+
Sbjct: 45 IYIKSTKSNLFCTLMDVKEKKVKTSCSLKVPEYDNEFNEKVNPFKRGKLLGEVFGKKTRELGFTEVGIYLDSNMNQARKGFLQVFGRKKIKISFIQLSKAYPHNGCRPSKVRRKKLRTKVKS 166
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: E6ZES1_ECTSI (Ribosomal protein S11 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZES1_ECTSI) HSP 1 Score: 184 bits (467), Expect = 1.390e-57 Identity = 85/122 (69.67%), Postives = 102/122 (83.61%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMKN 366
+YIKSTN+NIFC L+D + KKVKTSCS +VP YENEFNEREN +KRG+LLGELFGDK LG+TE+ ++LD +INK RKG + GL KK++KIS I+L K YPHNGCRPSK RRKK+RTK KN
Sbjct: 36 VYIKSTNKNIFCILLDAQDKKVKTSCSLRVPEYENEFNERENVFKRGILLGELFGDKVENLGYTEIVVYLDFNINKARKGVMVGLSKKKVKISLIELLKNYPHNGCRPSKTRRKKIRTKPKN 157
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: A0A8F0FCY4_9PHAE (Ribosomal protein S11 n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0FCY4_9PHAE) HSP 1 Score: 183 bits (465), Expect = 2.470e-57 Identity = 83/121 (68.60%), Postives = 101/121 (83.47%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMK 363
IY++ T RN+FCTLMD KKVKTSCS +VPAYENE+NERENPY RG+LLG LFGDKT+ELG+ ++ I+L + INKGR+G + GLG+K IKI+ +QL YPHNGCRPSKIRRKK+RTK K
Sbjct: 31 IYVRCTKRNVFCTLMDTLDKKVKTSCSMRVPAYENEYNERENPYTRGLLLGNLFGDKTIELGYNDLTIYLGAGINKGRRGVVRGLGEKGIKITLVQLGTGYPHNGCRPSKIRRKKIRTKPK 151
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: A0A0U1V7B8_SCYLO (Ribosomal protein S11 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1V7B8_SCYLO) HSP 1 Score: 183 bits (465), Expect = 3.510e-57 Identity = 89/122 (72.95%), Postives = 100/122 (81.97%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMKN 366
IYIKST RNIFCTL+ E KKVKTSCS +VP Y NEFNEREN +KRG+LLGEL GDK + LG+TEV + LD +NKGRKG I GL KKRIKIS I+LSK YPHNGCRP KIRRKK+RTK K+
Sbjct: 44 IYIKSTGRNIFCTLIGTEDKKVKTSCSLRVPEYNNEFNERENLFKRGILLGELLGDKIINLGYTEVTVHLDFGLNKGRKGVIIGLKKKRIKISLIELSKGYPHNGCRPKKIRRKKLRTKFKS 165
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: Q94Z02_PYLLI (Ribosomal protein S11 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z02_PYLLI) HSP 1 Score: 181 bits (459), Expect = 2.020e-56 Identity = 83/121 (68.60%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMK 363
+++KSTN+NIFCTL+D + KKVKTSCS +VP Y+NEFNER + +KRG+LLG+LFGDK +ELG+TEV I+LD INK RKG + G+G+K+IKISFI+L K YPHNGCRP+K+RRKKVRTK K
Sbjct: 33 VFVKSTNKNIFCTLLDFKDKKVKTSCSLRVPEYKNEFNERVSLFKRGVLLGQLFGDKIIELGYTEVYIYLDYGINKARKGVVKGIGEKKIKISFIRLIKGYPHNGCRPAKLRRKKVRTKHK 153
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: A0A2H4ZR01_9PHAE (Ribosomal protein S11 n=2 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A2H4ZR01_9PHAE) HSP 1 Score: 179 bits (455), Expect = 7.710e-56 Identity = 87/122 (71.31%), Postives = 98/122 (80.33%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMKN 366
IYIKSTNRNIFCTLM E KVKTSCS +VP Y NEFNEREN +KRG+LLGEL GD+ G+ EV+I LD INKGRKG I GL KK++KIS IQLSK YPHNGCRP K+RRKK+RTK K+
Sbjct: 31 IYIKSTNRNIFCTLMSTEDNKVKTSCSLRVPEYNNEFNERENLFKRGILLGELLGDRINTFGYREVSIHLDFGINKGRKGVIVGLKKKKVKISLIQLSKGYPHNGCRPKKMRRKKIRTKFKS 152
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: W5RG05_COSCS (Ribosomal protein S11 n=1 Tax=Costaria costata TaxID=2872 RepID=W5RG05_COSCS) HSP 1 Score: 179 bits (455), Expect = 9.630e-56 Identity = 82/121 (67.77%), Postives = 102/121 (84.30%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMK 363
I+IKST RN+FCTLMD+++KK+KTSCS +VP YENE+NEREN Y RG+LLG LFG+K++ELG+TE+ I+L S INKGR+G I GL KK +KI+F+ L YPHNGCRP K+RRKKVRTK K
Sbjct: 36 IFIKSTKRNVFCTLMDIKEKKIKTSCSLRVPTYENEYNERENLYTRGLLLGNLFGNKSIELGYTELTIYLGSGINKGRRGVIRGLYKKEVKITFLYLGTRYPHNGCRPVKVRRKKVRTKPK 156
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: A0A0U1XD94_9PHAE (Ribosomal protein S11 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XD94_9PHAE) HSP 1 Score: 179 bits (455), Expect = 1.030e-55 Identity = 88/121 (72.73%), Postives = 103/121 (85.12%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMK 363
+YI+STNRNIFCTLMD++ KKVKTSCS KVP Y NEFNEREN +KRG+LLGEL G++ ++LG+ EVA++LD INKGRKG + GL KK+IKIS IQLSK Y HNGCRP KIRRKKVRTK K
Sbjct: 41 VYIRSTNRNIFCTLMDLKDKKVKTSCSLKVPDYINEFNERENLFKRGILLGELLGNRIIDLGYKEVALYLDFSINKGRKGVVIGL-KKKIKISLIQLSKGYSHNGCRPKKIRRKKVRTKFK 160
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: A0A089N105_PETFA (Ribosomal protein S11 n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N105_PETFA) HSP 1 Score: 179 bits (453), Expect = 1.710e-55 Identity = 89/122 (72.95%), Postives = 99/122 (81.15%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMKN 366
IYIKSTNRNIFCTL++ E KVKTSCS +VP Y NEFNEREN +KRG LLGEL GD+ LG+ EV+I LD INKGRKG I GL KK+IKIS IQLSK YPHNGCRP K+RRKKVRTK K+
Sbjct: 34 IYIKSTNRNIFCTLINTEDNKVKTSCSLRVPEYINEFNERENLFKRGTLLGELLGDRVNTLGYKEVSIHLDFGINKGRKGVIIGLKKKKIKISLIQLSKGYPHNGCRPKKMRRKKVRTKFKS 155
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Match: A0A7U1G3L1_9PHAE (Ribosomal protein S11 n=1 Tax=Laminaria solidungula TaxID=309363 RepID=A0A7U1G3L1_9PHAE) HSP 1 Score: 178 bits (452), Expect = 3.340e-55 Identity = 81/121 (66.94%), Postives = 99/121 (81.82%), Query Frame = 1
Query: 1 IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLGELFGDKTLELGFTEVAIFLDSDINKGRKGFIGGLGKKRIKISFIQLSKAYPHNGCRPSKIRRKKVRTKMK 363
I+IKST RN+FCTL+D ++KKVKTSCS +VP YENE+NEREN Y RG+LLG LFGDK +ELG+TE+ I+L S INKGR+G + GL KK +KI+F+ L YPHNGCRP K+RRKK RTK K
Sbjct: 42 IFIKSTKRNVFCTLLDTDEKKVKTSCSLRVPVYENEYNERENLYTRGLLLGNLFGDKAIELGYTELTIYLGSGINKGRRGVVRGLSKKEVKITFLYLGTRYPHNGCRPVKVRRKKFRTKPK 162 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54949.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54949.1.1 >prot_P-wetherbeei_contig54949.1.1 ID=prot_P-wetherbeei_contig54949.1.1|Name=mRNA_P-wetherbeei_contig54949.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp IYIKSTNRNIFCTLMDVEQKKVKTSCSFKVPAYENEFNERENPYKRGMLLback to top mRNA from alignment at P-wetherbeei_contig54949:3..371+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54949.1.1 ID=mRNA_P-wetherbeei_contig54949.1.1|Name=mRNA_P-wetherbeei_contig54949.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig54949:3..371+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54949:3..371+ >mRNA_P-wetherbeei_contig54949.1.1 ID=mRNA_P-wetherbeei_contig54949.1.1|Name=mRNA_P-wetherbeei_contig54949.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig54949:3..371+ (Phaeothamnion wetherbeei SAG_119_79)back to top |