mRNA_P-wetherbeei_contig54871.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54871.1.1 vs. uniprot
Match: A0A6B1FZ33_9CHLR (Extracellular solute-binding protein n=1 Tax=Caldilineaceae bacterium SB0675_bin_29 TaxID=2605266 RepID=A0A6B1FZ33_9CHLR) HSP 1 Score: 160 bits (405), Expect = 1.160e-46 Identity = 81/171 (47.37%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 7 LGIYEDGSWRFGLLKALDDLKFEWGSFFMPILEKGDGVGKSEYATGKEPPAIGGATAQQYGITNTAEKNGTVDLCVDWLRYITAPAQAGPIIAEKGQFLPNIKDVDVNDDLKDALAAVTSGVGEAGMIAYSDKLDAEAAAKIDTAVNNYLLGRADLDKTAQDIQDLLMTSA 519
+ +YEDGSWRFG LKA + FEW +F+ P + + D S +A G+ P IGGATA Q+ + E++G V L VD+LRY+TAP AG +IAE G FLPNIK VDVN DL++ L A+T G+GEAGM+ Y DK+ E KID ++ L ++ A+ I +LL+ A
Sbjct: 29 VAVYEDGSWRFGYLKADPLVDFEWSTFYAPTITEAD----SPFAIGEAAPPIGGATAAQWAMATKTERDGIVPLAVDFLRYVTAPQNAGRMIAETGTFLPNIKGVDVNPDLREPLRAITEGLGEAGMVTYPDKIGTEQREKIDAIWTDFKLDVVSQEQAAEQINELLLEYA 195
BLAST of mRNA_P-wetherbeei_contig54871.1.1 vs. uniprot
Match: A0A6N8W445_9CHLR (Extracellular solute-binding protein n=5 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6N8W445_9CHLR) HSP 1 Score: 158 bits (400), Expect = 4.670e-43 Identity = 80/171 (46.78%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 7 LGIYEDGSWRFGLLKALDDLKFEWGSFFMPILEKGDGVGKSEYATGKEPPAIGGATAQQYGITNTAEKNGTVDLCVDWLRYITAPAQAGPIIAEKGQFLPNIKDVDVNDDLKDALAAVTSGVGEAGMIAYSDKLDAEAAAKIDTAVNNYLLGRADLDKTAQDIQDLLMTSA 519
+ ++EDGSWRFG LKA + FEW +F+ P + + D S +A G+ P IGGATA Q+ + AE++G V L +D+LRY+TAP AG +IAE G FLPNIK VDVN DL++ L A+T G+GEAGM+ Y DK+ E KI ++ L D+ A+ I +LL+ A
Sbjct: 312 VAVFEDGSWRFGYLKADPLVDFEWSTFYAPTITEAD----SPFAIGEAAPPIGGATAAQWALATKAEQDGIVPLAIDFLRYVTAPQNAGRMIAETGTFLPNIKGVDVNPDLREPLRAITEGLGEAGMVTYPDKIGTEQREKIAAIWTDFKLDVVSQDEAAEQINELLLEYA 478
BLAST of mRNA_P-wetherbeei_contig54871.1.1 vs. uniprot
Match: A0A3A0AFI5_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0AFI5_9CHLR) HSP 1 Score: 157 bits (396), Expect = 1.820e-42 Identity = 80/170 (47.06%), Postives = 113/170 (66.47%), Query Frame = 1
Query: 4 QLGIYEDGSWRFGLLKALDDLKFEWGSFFMPILEKGDGVGKSEYATGKEPPAIGGATAQQYGITNTAEKNGTVDLCVDWLRYITAPAQAGPIIAEKGQFLPNIKDVDVNDDLKDALAAVTSGVGEAGMIAYSDKLDAEAAAKIDTAVNNYLLGRADLDKTAQDIQDLLMT 513
++ ++EDGSWRFG LKA + FEWGSF+ P + + D S +ATG+ P IGGATA Q+ ++ +E++G + L +D+LR++TAP A +I+E GQFLPNIK VDVN DLK+ L A+T G+GEAGM+ Y DK+ E KI ++ L + ++ Q I D LMT
Sbjct: 312 EVAVFEDGSWRFGSLKADPLVDFEWGSFYAPTITEQD----SPFATGRAAPPIGGATAAQWAVSTRSERDGILPLVIDFLRFVTAPQNANRLISELGQFLPNIKGVDVNPDLKEPLRAITEGLGEAGMVTYPDKIGTEQREKIAQVWTDFHLDQITQEEAQQQI-DALMT 476
BLAST of mRNA_P-wetherbeei_contig54871.1.1 vs. uniprot
Match: A0A7W1NXV2_9CHLR (Carbohydrate ABC transporter substrate-binding protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7W1NXV2_9CHLR) HSP 1 Score: 78.2 bits (191), Expect = 1.050e-13 Identity = 60/180 (33.33%), Postives = 85/180 (47.22%), Query Frame = 1
Query: 1 GQLGIYEDGSWRFGLLKALDDLKFEWGSFFMPILEKGDGVGKSEYATGKEPPAIGGATAQQYGITNTAEKNGTVDLCVDWLRYITAPAQAGPIIAEKGQFLPNIKDVDVNDDLKDALAAVTSGVGEAGMIA---YSD---KLDAEAAAKIDTAVNNYLLGRADLDKTAQDIQDLLMTSAK 522
GQLG Y G+W+ + D FE+G ++P K D G A G G ++A QYGI +A KNG +DL VD+L+YI+AP GP+ G FLP +K D V SG + + ++D +LD A A+ + LG+ D T +Q + M AK
Sbjct: 309 GQLGAYWTGTWKNKTIA--DAAPFEYGVTYIPGFTKEDAPG----AQGTAYRVGGPSSAGQYGIAQSAAKNGKLDLAVDFLQYISAPQNFGPMATSLGGFLPLVKGTDAGP--------VMSGFEDVAKLPERMFNDPDNRLDLAARDPWINAMQAFFLGQTDDATTLTALQGIWMDGAK 474
BLAST of mRNA_P-wetherbeei_contig54871.1.1 vs. uniprot
Match: A0A3A0A279_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0A279_9CHLR) HSP 1 Score: 68.2 bits (165), Expect = 3.160e-10 Identity = 38/128 (29.69%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 1 GQLGIYEDGSWRFGLLKALDDLKFEWGSFFMPILEKGDGVGKSEYATGKEPPAIGGATAQ-QYGITNTAEKNGTV-----DLCVDWLRYITAPAQAGPIIAEKGQFLPNIKDVDVNDDLKDALAAVTS 366
G + +Y +GSW ++++FEW +F +P ++ +E+ TG P IGG +A QY I+ T + N T+ + VD+L+++TAP AGP++ + G F+P I + + + + A+++
Sbjct: 353 GDVAMYWNGSWAVPQTLNNEEVQFEWATFSLPTFDEE----ATEFYTGVSAPMIGGPSAAFQYSIS-TNQANSTMSPEKLEAAVDFLKFLTAPQNAGPMVNDLGSFIPTIAGTEPLPSMAELIQAMSN 475
BLAST of mRNA_P-wetherbeei_contig54871.1.1 vs. uniprot
Match: A0A7C3S2I0_9FIRM (Carbohydrate ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C3S2I0_9FIRM) HSP 1 Score: 67.0 bits (162), Expect = 7.940e-10 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 1 GQLGIYEDGSWRFGLLKALDDL-KFEWGSFFMPILEKGDGVGKSEYATGKEPPAIGGATAQQYGITNTAEKNGTVDLCVDWLRYITAPAQAGPIIAEKGQFLPNIKDV 321
G+ ++ +GSW ++ LD L KFEWG P++ T K G + A Q+ + +A+K G +++ VD+L Y+TAP AGP+IA+ G FLP+IK V
Sbjct: 305 GKAVMHLNGSWMIKPVR-LDPLRKFEWGWMPFPVVTNKTTKYAPRPGTIKGLTLGGPSAAFQFNVPASAQKQGMLEVAVDFLMYLTAPKNAGPLIADLGAFLPSIKGV 411 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54871.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54871.1.1 >prot_P-wetherbeei_contig54871.1.1 ID=prot_P-wetherbeei_contig54871.1.1|Name=mRNA_P-wetherbeei_contig54871.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp GQLGIYEDGSWRFGLLKALDDLKFEWGSFFMPILEKGDGVGKSEYATGKEback to top mRNA from alignment at P-wetherbeei_contig54871:6..527- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54871.1.1 ID=mRNA_P-wetherbeei_contig54871.1.1|Name=mRNA_P-wetherbeei_contig54871.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig54871:6..527- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54871:6..527- >mRNA_P-wetherbeei_contig54871.1.1 ID=mRNA_P-wetherbeei_contig54871.1.1|Name=mRNA_P-wetherbeei_contig54871.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig54871:6..527- (Phaeothamnion wetherbeei SAG_119_79)back to top |