mRNA_P-wetherbeei_contig5474.1.8 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A835Z130_9STRA (FACT complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z130_9STRA) HSP 1 Score: 656 bits (1693), Expect = 7.170e-224 Identity = 374/639 (58.53%), Postives = 464/639 (72.61%), Query Frame = 1
Query: 1 TRGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKGSPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQEQANAREQRMSELLKKRARER-AAKMAGAQTGQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHA-PRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHGKTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENG--GLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDT-----DDAGDRKPAGWARLRMDGSDDE 1890
T+ LGFALG DF+E AL + AKN A+ R+ MVF+L +G +VPI + +RKGS Y +TFS+ + D +L+ DE E TK G++W D+SY + DD D XXXXXXXXXXXXXXXXX G + E A A ++R +E ++ ARER + YP+DTMP+++ VDM REVVL PINGQPVPFSIHTIKNVVMPEPD+HS YLRINFFAPGQ+LGKEASR MA+LVE+ + AF+KELT+RSL+Q+NL AFRQ+QELRKRLR REQKAVEEADLVVQ KL+++ D KVP+L+DLTLRPNL GKT G+LEAH NGLRF+S +GE +++LYAN++ A FQPCEG DTKV+LHF+L++PIMVGKKAHK++QVYTEA+DSTVNLD ARRS+YDPDE++EEQ+D++++KRLN AFKDFA+KV+KV R LEFDIPYKELGF+G P +EMVF+QPTT+AL+NVTD P FVV D IEHVHFERV +N D+KII AN+ + P+ +NMI+QK+LNQIMGWL DS+ITYTQ+ K WNWK +L+ VR+DERFYLDT + G +KPAGW LRM SD E
Sbjct: 145 TKSLGFALGLDFRERALDINAKNAARARDGMVFSLNVGLADVPIPEEQRKGSNYKHNTFSMAIGDVLLVHKDEPAEFLTKGGKEWTDISYTL---DDSDXXXXXXXXXXXXXXXXXXXXXASAGQSSA----------------KRTGPGHAEPARAEDERAAEAAREGARERDGXXXXXXXXXXXXXXXXXXXXXXGHGPGMYYPKDTMPHQIKVDMDREVVLCPINGQPVPFSIHTIKNVVMPEPDNHSFYLRINFFAPGQALGKEASRRMAKLVERFGRDKQAFVKELTFRSLDQQNLGMAFRQVQELRKRLRLREQKAVEEADLVVQAKLIRMTDMKVPRLADLTLRPNLTGKTTGALEAHTNGLRFISIKGESVEILYANIRLAVFQPCEGNDTKVVLHFYLRHPIMVGKKAHKNVQVYTEAVDSTVNLDNARRSHYDPDEIMEEQQDKKLRKRLNQAFKDFAAKVSKVAARNQQTLEFDIPYKELGFQGTPHKEMVFIQPTTYALLNVTDQPAFVVLTDDIEHVHFERVNPNGRNFDLKIITRANVAADQPPSEPLSINMIEQKFLNQIMGWLVDSSITYTQTDKTWNWKAVLNLVREDERFYLDTGKSTEQEDGTKKPAGWTFLRMQDSDGE 764
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: D7FPY1_ECTSI (FACT complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY1_ECTSI) HSP 1 Score: 661 bits (1705), Expect = 3.670e-223 Identity = 382/642 (59.50%), Postives = 466/642 (72.59%), Query Frame = 1
Query: 1 TRGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKG-SPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQEQANAREQRMSELLKKRARERAAKMAGAQTGQD---DEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHGKTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGK-DTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFRE------MVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQ-KYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTDDAGDRKPAGWARLRMDGSDDE 1890
T+ LGF+LG D++ESA+ ++AKN K+++ MVFNL++G Q+VP+ A++KG S Y +TFSV +ADTV+++ A EV TK ++W+D+ YN+ G D G XXXXXXXXXXXXXXXXXX XXXXX L RA+ERAA + G+D DEG V++L +Y +YP+ PN+L VDM +EVV PINGQPVP SIHTIKNV P+PD+H HYLRINFF G SLGKEASR MA+ F+KEL YRSLE++NL + +RQIQELRKRLR REQKAVEEADLV Q KL++ KD +VP+L DLT+RP L GKT+GSLEAH NGLRF S + LD LYAN+KHAF+QPC G DTKVILHF LK+PIMVGKKAHK+IQV TEA+D+TVNLDG +RSNYDPDE++EEQR+R M+KR N+AFKDFASKVTK R G LEFDIP+ +LGF G PF+E M F+QPTT+AL+NVTD PFFVVPL+ IEHVHFERV S+SK CDMKIIM+ NM ENGG P ++MIDQ KYLN+IM WLE+ ITYTQ++KPWNWK M+ D+R D RFYLDT + G+RKPAGWARLR + S+DE
Sbjct: 348 TKTLGFSLGLDYRESAMVISAKNSTKMKDGMVFNLSVGLQDVPLSTADKKGGSSYQMETFSVIIADTVVVRETGA-EVLTKQSKEWKDICYNLKGDDGGSDENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGR------------------------------LPGRAKERAAALERRARGEDGSGDEGGEEVDELAAYKDPADYPRRVQPNQLFVDMEKEVVFAPINGQPVPLSIHTIKNVTQPDPDNHCHYLRINFFTSGASLGKEASRTMAK------DPATFVKELIYRSLERQNLDKVYRQIQELRKRLRTREQKAVEEADLVTQAKLIRSKDQRVPRLQDLTMRPTLAGKTVGSLEAHSNGLRFTSQKHAPLDFLYANIKHAFYQPCNGVIDTKVILHFSLKHPIMVGKKAHKEIQVSTEAIDATVNLDGVKRSNYDPDEMMEEQRERGMRKRRNNAFKDFASKVTKAASRDGQSLEFDIPFDQLGFGGKPFKEARTNTLMGFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSSSKTCDMKIIMKENMLENGGEPKTIDMIDQNKYLNKIMQWLEECEITYTQTAKPWNWKAMMADIRGDNRFYLDTYEDGERKPAGWARLREEDSEDE 952
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A1Z5K1K7_FISSO (FACT complex subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1K7_FISSO) HSP 1 Score: 514 bits (1325), Expect = 7.440e-166 Identity = 354/711 (49.79%), Postives = 482/711 (67.79%), Query Frame = 1
Query: 4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKG----SPYAA-DTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXX-GLGAYDXXXXXXXXXXR-TTRL-RDRGVNAEQQEQANAREQRMSELLKKRARERAAKMAGAQTGQ-DDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDDEXXXXXXXXXXXXXXXXXXXXXXXXXX----ESFXXXXXXXXEGGDDALSEEGEDWDELERKAARDDHDSKR 2091
+ LGFA G DF+ES++ LT KN + ++ MVF L++GFQ++ + +A+R SP +F++ ++D V I AD P+V TK G+D DVSYNIN ++G+GS XXXXXXXXXXX G Y R ++RL +D + QE RE+R +L+++R ER ++A A + DD+ + E+L++Y + +YP + +PN++ VDM + V +PI G P+PF I TIKNVVMPE DS + LRINF+ G ++GK+A M +LV+K+AP +FI+ELT+RSL+ NLTQAFRQI ELRKR+R +E + EEADLV Q+KLV+ K+ +VP+L+D+T+RP G KT G+LEAH NG+RF+S R E++DV+Y+N+K+A +QPCE + V++HFHLKNPIM+GKK H D+Q YTE +DS+ +D +RRS YDPDE+ +EQR+RQM+K+LN AFKDF KV V ++ G++LEFDIPY++LGF G P +EMV + PT + LVN+T++PFFVV L ++HVHFERV SK DM ++ + KE P V+MI + I WL D ITYT+ NWK ++ VR D+RFY++T+ D+ K AGW LRM G DD XXXXXXXXXXX XXXXXXXXXXXX +S XXXXXXXX L EEG DWDE+E KAA +D +R
Sbjct: 359 KNLGFASGLDFRESSMLLTPKNMSVFKQGMVFCLSVGFQDLELSEADRSAVNDKSPIKKLSSFALLVSDMVAITADN-PDVMTKMGKDLTDVSYNIN--EEGEGSXXXXXXXXXXXXXVEAPDAPKGDEKYARSLANQRGGVRQSSRLAKDAAAMQDAQEGVAERERRQIKLMERRNEERLRELARANRKKGDDDNKDQAEELEAYKRTRDYPDNILPNQVKVDMANQCVFLPIYGNPIPFHISTIKNVVMPEGDSAT-LLRINFYTAGMAVGKDAPANMVKLVQKYAPYASFIRELTFRSLDGHNLTQAFRQISELRKRVRTKELQQQEEADLVEQEKLVRTKNERVPRLADVTMRPVFAGRKTQGNLEAHSNGMRFISTRQEIVDVMYSNIKYAIYQPCEN-EIMVLIHFHLKNPIMIGKKKHNDVQFYTEIVDSSQAVDNSRRSMYDPDEMDDEQRERQMRKKLNQAFKDFCKKVDAVAKKNGYELEFDIPYRDLGFTGNPHKEMVTIMPTLNCLVNLTETPFFVVDLVDVDHVHFERVTYMSKAFDMVLVNKDFNKE----PWRVDMIPNGDKDSIQDWLTDMEITYTEGPMNLNWKQIIATVRADDRFYMNTEEDSVTEKEAGWEFLRMFGRDDXXXXXXXXXXXXFSQXXXXXXXXXXXXXXDFDSXXXXXXXXXXXXXXXLEEEGLDWDEMEEKAAEEDRQKRR 1060
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A7S0GEE7_9STRA (FACT complex subunit n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEE7_9STRA) HSP 1 Score: 498 bits (1282), Expect = 4.740e-163 Identity = 288/638 (45.14%), Postives = 406/638 (63.64%), Query Frame = 1
Query: 4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAER-----KGSPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQ-QEQANAREQRMSELLKKRARERAAKMAGAQT---GQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSD 1884
+ LGF++G DF++SAL L+ KN +R M+FNL++GF V + +++ K + + T+++ +AD V++ + A EV TK + D+SY I G D D S Y + RL A+ QE A+ RE+R EL+ ++ ER ++A A G D E + E+L +Y +A +YP MPN++ VDM E V++PI G P+PF I TIKNVV+P+PD + YLRINF+ G ++GK+ M +L+ KHAP +FI+ELT+RSL+ NLTQAFRQI ELRKR+R RE + EEA+LV Q+KLV+ K+ +VP+LSDLTLRP G KT G++EAH NGLRF+S RGE++DV+Y+N+KHA +QPCE + V++HFHL+NPIM+GKK KDIQV+TE +D+++ +D RRS YDPDE+ +EQR+RQ++K+LN AFK+F KV ++ G+ LEFDIPY++LGF G P +MVFVQPT + LVNVTD+PFFV L ++HVHFERV SK D+ +I + K+ P V+MI + I WL D ++YT+ NWK ++ D+RFY++T+ D +K AGW LRM G D
Sbjct: 40 KNLGFSMGLDFRDSALVLSPKNQVMIRSGMLFNLSVGFSGVALSDSDKSSVGNKSAVKSVKTYALQVADMVVVTSKSA-EVLTKHAKALTDISYVIGG--DSDESSDEGGNASHDDAAYAKSLANQEDKYPSGKRA------SARLAKNNTGAQDTQEGASERERRQVELMSRKNEERIRELARANAKNKGADKESD-LAEELITYNRARDYPDYVMPNQVKVDMKNECVILPIFGNPIPFHISTIKNVVLPDPDLAT-YLRINFYTAGSTIGKDTPVNMGKLILKHAPYASFIRELTFRSLDSHNLTQAFRQISELRKRVRQREIREQEEANLVKQEKLVRTKNERVPRLSDLTLRPVFSGRKTQGNIEAHTNGLRFISTRGEIVDVMYSNIKHAIYQPCEN-EIMVLIHFHLRNPIMLGKKRQKDIQVFTEVVDASLQVDAGRRSMYDPDEMDDEQRERQLRKKLNQAFKEFCRKVESTAKKNGYSLEFDIPYRDLGFNGTPHNQMVFVQPTLNCLVNVTDTPFFVTDLSEVDHVHFERVTFMSKTFDVVLINKDFSKQ----PWRVDMIPNSDKDAIQDWLTDMELSYTEGPMNLNWKQIMLTCAGDDRFYMNTEEDEITQKEAGWEFLRMFGRD 661
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A7S4JB19_9STRA (FACT complex subunit (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JB19_9STRA) HSP 1 Score: 495 bits (1274), Expect = 2.120e-158 Identity = 286/642 (44.55%), Postives = 412/642 (64.17%), Query Frame = 1
Query: 4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGK-----AERKGSPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGD----DGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQ-EQANAREQRMSELLKKRARERAAKMAGA--QTGQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDD 1887
+ LGF++G DF+E++L L+AKN A LR MVFN+A+GF NV + A K + + + + ++D V + ++ TK + D+SY IN + D D A G G + RL V ++ E A R++R EL+ +R ER ++A A + GQD E E E+L++Y + +YP + +PN++ VDM + V++P+ G PVPF I TIKN V+PE D+ + YLRINF+ G +LGK+A + A LV+++AP +FI+E+T+RSLE NLTQA+RQIQELRKR R +E + EEADLV Q+KLV+ K +VP+L+DLT+RP G KT G+LE+H NG+RF+S RGEV+D++YAN+KHA FQPCE ++ V++HFHLKNPIM+GKK DIQ +TE +D++ +DGARRS YDPDE+ +EQR+RQ+++RLN AFK+F K+ V ++ G+ LEFD+PY++LGF+G P +EMVF+ PT + LVN+T++PFFVV L ++HVHFERV SK D+ +I + K+ P V+MI + I WL D ++YT+ NWK +++ V+ D+RFY++T+ D K AGW LRM G DD
Sbjct: 359 KNLGFSVGLDFREASLVLSAKNPAILRPGMVFNVAVGFANVELSDKGRDAANSKSAVKSLKKYGLIISDMVTVTG-RGSDMLTKHSKALTDISYLINDDENASSDDDAPDAPDGDEALARTLAKAQEDTGNGQ-----------RMSARLARNAVAIQESVEGAAERQRRQIELMARRNEERLRELARANKKKGQDGETE-KAEELETYMRTKDYPDNVLPNQVKVDMANKCVILPVCGNPVPFHISTIKNCVLPEADAAT-YLRINFYTAGMALGKDAPKNTAMLVQRYAPYASFIREMTFRSLEPHNLTQAYRQIQELRKRERQKELREQEEADLVKQEKLVRTKTERVPRLADLTMRPVFAGRKTQGNLESHTNGMRFISTRGEVVDIMYANIKHAIFQPCE-QEIMVLVHFHLKNPIMLGKKKQADIQFFTEVVDASQAVDGARRSMYDPDEMDDEQRERQLRRRLNEAFKEFCRKMEAVARKNGYSLEFDLPYRDLGFQGNPHKEMVFITPTLNCLVNLTETPFFVVDLSDVDHVHFERVTFASKALDIVLIPKDFSKQ----PWRVDMIPNDNKDSIQEWLTDMELSYTEGPMNLNWKQIMETVKSDDRFYMNTEEDEVTEKEAGWEFLRMYGHDD 981
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: B8C213_THAPS (FACT complex subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C213_THAPS) HSP 1 Score: 491 bits (1265), Expect = 2.920e-157 Identity = 320/717 (44.63%), Postives = 453/717 (63.18%), Query Frame = 1
Query: 4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKGSPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQEQANAREQRMSELLKKRARERAAKMAGAQTGQD-DEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDDEXXXXXXXXXXXXXXXXXXXXXXXXXXE---SFXXXXXXXXEGGDDALSEEGEDWDELERKAARDDHDSKRQHEEEDNRASKKQRR 2136
+ LGF++G DF++ L L +K+ R+ MVFNLA+ + + A S ++ + + +ADTV++ + A + TK G+D D+SY IN DD + XXXXXXXX R+ RL +A++ E A RE++ +L+ ++ ER ++A A + DE E+L++Y + + P + +PN++ VDM + V++PI G PVPF I TIKNVV+P+PDS + YLRINF+ G ++GK+A +L++K++P FI+E+T+RSL+ +LT AFRQI ELRKR R +E + EEA+LV QDKLV+ K+ +VP+LSDLT+RP G KT G++EAH NGLRF+S+RGE++DV+Y+N+KHA FQPCE + V++HFHLKNPIMVGKK +DIQ +TE +D++ +D +RS YDPDE+ +EQR+RQ++KRLN AFK+F KV V ++ G+ LEFDIPY++LGF G P +EMVF+QPT + L N+T++PFFVV L ++HVHFERV SK DM +I + K+ P V+MI + I WL D I+YT+ NWK ++ V D+RFY+DT+ D K AGW LRM G DD XXXXXXXXXXXXXX F D+ L E+G DWDE+ER+AA DD KR ++E R +K+++R
Sbjct: 357 KSLGFSIGLDFRDPLLVLNSKSTVTFRKGMVFNLAVSLAGIKLSAAVNSKSADLSE-YGLVVADTVVLHENGA-DAMTKYGKDLTDISYTIN--DDEEXXXXXXXXXXXXAKLAKKLAKE-------EELDPSGGRRSGRLAANMSSAQETEGAAERERKQIDLMARKNEERLRELARASKKKGGDEKAKKAEELEAYKRTKDLPDNVLPNQVKVDMANQCVILPICGNPVPFHISTIKNVVLPDPDSAA-YLRINFYTAGMAVGKDAPENTVKLIQKYSPYATFIREMTFRSLDSHSLTTAFRQISELRKRARMKELQDQEEANLVKQDKLVRTKNERVPRLSDLTMRPVFAGRKTQGNIEAHSNGLRFISSRGEIVDVMYSNIKHAIFQPCES-EIMVLIHFHLKNPIMVGKKKQQDIQFFTEVVDASQAVDAGKRSMYDPDEMDDEQRERQLRKRLNEAFKEFCRKVESVARKNGYSLEFDIPYRDLGFTGNPHKEMVFIQPTLNCLCNLTETPFFVVDLSLVDHVHFERVTFMSKAFDMVLINKDFTKQ----PWRVDMIPNDDKDSIQEWLTDMEISYTEGPMNLNWKQIMSTVDGDDRFYMDTEEDEVTPKEAGWEFLRMFGKDDADSGESEENDSGYXXXXXXXXXXXXXXXXXXDFDSEDSGSEFDADEDLEEQGMDWDEMEREAAADDRRKKRDGDDEPARPAKRRQR 1056
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A7S1BP25_9STRA (FACT complex subunit n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BP25_9STRA) HSP 1 Score: 493 bits (1268), Expect = 1.340e-156 Identity = 295/641 (46.02%), Postives = 428/641 (66.77%), Query Frame = 1
Query: 4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAER-----KGSPYAADTFSVTLADTVLIK-ADE-APEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVN-AEQQEQANAREQRMSELLKKRARERAAKMAGAQT-GQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHGKTL-GSLEAHLNGLRFVSNRGE-VLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDT-DDAGDRKPAGWARLRMDGSDDE 1890
+ LGFA G DF++S+L LTAKN + R MVF L++G N+P+ A++ K + + +++ +ADTV++K +DE + EV+TK + D+SY IN + + XXXXXXXXXXXXXX G ++RL G++ A+ E A RE++ L++++ ER ++A A + G++ ++L++Y +YP +P ++ VDM E V++PI G PVPF I TIK+VV+P+PD + YLRINF++ GQ+L K+A + +L++KHAP FI+E+T+RSL+ +NLTQAFRQ+ ELRKR+R REQK EEA+LV Q+ LV+ K+ +VP+LSDL++RP L G+ + G+LEAH NG RF++ R + VLD++Y N+KHA FQPCE K+ V++HFHLKNPIMV KK KDIQ YTE +D+++ + RRS YDPDE+ +EQR+RQ++KRLN AFKDF KV V+++ G+ +EFDIPY++LGFEG P +EMVF+QPT + +VN+T++PFF L ++HVHFERV SK D+ +I + + K+ P ++MI + I WL D I+YT+ NWK ++ V D+RFY++T DD K AGW LRM G DD+
Sbjct: 414 KNLGFATGLDFRDSSLLLTAKNPSLFRPGMVFVLSVGLANLPLKAADKENVSDKSAVKNLENYALVIADTVVLKNSDEGSAEVFTKHSKSLTDISYTIN-------NNSSDEDXXXXXXXXXXXXXXXXGPKLGSKVTSGGTRASSRLASTGIDMADALEGAAERERKQMALMERKNEERLRELARANSKGKNXXXNEEAQELRTYPYPKDYPDSVLPTQVKVDMVSECVILPITGTPVPFHISTIKSVVLPDPD-RATYLRINFYSSGQALTKDAPTNIVKLIQKHAPYATFIREMTFRSLDSQNLTQAFRQVSELRKRVRQREQKEQEEANLVKQETLVRTKNERVPRLSDLSMRPVLQGRKMQGNLEAHSNGFRFITTRRDTVLDIMYNNIKHAIFQPCE-KEIMVLIHFHLKNPIMVFKKKQKDIQFYTEVIDASLQVSDQRRSMYDPDEMDDEQRERQLRKRLNEAFKDFCRKVETVSKKNGYGVEFDIPYRDLGFEGTPHKEMVFIQPTLNCIVNLTETPFFCADLSEVDHVHFERVTFHSKAFDIVMINKDHTKQ----PWRIDMIPNTDKDSIQDWLTDMDISYTEGPMNLNWKSIMGTVAGDDRFYMNTEDDEVTPKEAGWEFLRMQGRDDD 1041
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A6S9A9U8_9STRA (FACT complex subunit n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9A9U8_9STRA) HSP 1 Score: 489 bits (1259), Expect = 6.850e-156 Identity = 290/639 (45.38%), Postives = 414/639 (64.79%), Query Frame = 1
Query: 4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGK-----AERKGSPYAADTFSVTLADTVLIKAD-EAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQEQANA-REQRMSELLKKRARERAAKMAGAQTGQDDEGEGN-VEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDDE 1890
+ LGF++G DF++ L L+AKN R MVF L++GF VP+ A K + + + ++D V+I + ++ EV TK G+ D+SY IN XXXXXXXXXXXX R++RL + + A RE+R L+ ++ ER ++A + + D+GE + E+L++Y + +YP +PN++ VDM + V++PI G PVPF I TIKNVV+P+PDS + YLRINF+ G ++GK+A MA+LV+K+AP +FI+E+T+RSL+ NLTQAFRQI ELRKR R +E + +EEA+LV Q KLV+ K +VP+LSDLT+RP G KT G+LEAH NGLRF+S RGE++D++Y N+KHA FQPCE + V++HFHL++PIM+GKK +DIQ +TE +D++ +D RRS YDPDE+ +EQR+RQ++++LN AFK+F KV V ++ G LEFDIPY++LGF G P +EMVF+QPT + LVN+T++PFFVV L ++HVHFERV SK D+ +I + K+ P V+MI I WL D ++YT+ NWK ++ V D+RFY+DT+ D +K AGW+ LRM G+D+E
Sbjct: 361 KNLGFSIGLDFRDPNLVLSAKNSIHFRPGMVFTLSVGFAGVPLSDSAKSAANSKSAVKDIKEYGLLISDMVVISENSKSGEVMTKHGKSLTDISYTINDXX----XXXXXXXXXXXXXXXNGDEEYARKVAKAPDNVVNGKRRSSRLESTNEAIQNAHEGTAERERRQIALMTRKNEERLRELARSARNKGDDGESDKAEELRAYDRTKDYPDSVLPNQVKVDMVNQCVILPICGNPVPFHISTIKNVVLPDPDSAT-YLRINFYTAGMAVGKDAPANMAKLVQKYAPYASFIREMTFRSLDSHNLTQAFRQISELRKRARQKELRELEEANLVKQAKLVRTKTERVPRLSDLTMRPVFAGRKTQGNLEAHSNGLRFISMRGEIVDIMYPNIKHAIFQPCEN-EIMVLVHFHLRHPIMLGKKKQQDIQFFTEVIDASQTVDAGRRSMYDPDEMDDEQRERQLRRKLNEAFKEFCRKVENVAKKNGFSLEFDIPYRDLGFNGNPHKEMVFIQPTLNCLVNLTETPFFVVNLSDVDHVHFERVTFMSKAFDIVLINKDFSKQ----PWRVDMIPNDDKESIQEWLTDMELSYTEGPMNLNWKQIMGTVAGDDRFYMDTEEDEVTKKEAGWSFLRMFGNDEE 989
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A7S1BQI3_9STRA (FACT complex subunit n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQI3_9STRA) HSP 1 Score: 478 bits (1229), Expect = 1.220e-155 Identity = 288/631 (45.64%), Postives = 419/631 (66.40%), Query Frame = 1
Query: 34 FKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAER-----KGSPYAADTFSVTLADTVLIK-ADE-APEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVN-AEQQEQANAREQRMSELLKKRARERAAKMAGAQT-GQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHGKTL-GSLEAHLNGLRFVSNRGE-VLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDT-DDAGDRKPAGWARLRMDGSDDE 1890
F++S+L LTAK R MVF L++G N+P+ A++ K + + +++ +ADTV++K +DE + EV+TK + D+SY IN + + XXXXXXXXXXXXXX G ++RL G++ A+ E A RE++ L++++ ER ++A A + G++ ++L++Y +YP +P ++ VDM E V++PI G PVPF I TIK+VV+P+PD + YLRINF++ GQ+L K+A + +L++KHAP FI+E+T+RSL+ +NLTQAFRQ+ ELRKR+R REQK EEA+LV Q+ LV+ K+ +VP+LSDL++RP L G+ + G+LEAH NG RF++ R + VLD++Y N+KHA FQPCE K+ V++HFHLKNPIMV KK KDIQ YTE +D+++ + RRS YDPDE+ +EQR+RQ++KRLN AFKDF KV V+++ G+ +EFDIPY++LGFEG P +EMVF+QPT + +VN+T++PFF L ++HVHFERV SK D+ +I + + K+ P ++MI + I WL D I+YT+ NWK ++ V D+RFY++T DD K AGW LRM G DD+
Sbjct: 1 FRDSSLFLTAKIPYLFRPGMVFVLSVGLANLPLKAADKENVSDKSAVKNLENYALVIADTVVLKNSDEGSAEVFTKHSKSLTDISYTIN-------NNSSDEDXXXXXXXXXXXXXXXXGPKLGSKVTSGGTRASSRLASTGIDMADALEGAAERERKQMALMERKNEERLRELARANSKGKNXXXNEEAQELRTYPYPKDYPDSVLPTQVKVDMVSECVILPITGTPVPFHISTIKSVVLPDPD-RATYLRINFYSSGQALTKDAPTNIVKLIQKHAPYATFIREMTFRSLDSQNLTQAFRQVSELRKRVRQREQKEQEEANLVKQETLVRTKNERVPRLSDLSMRPVLQGRKMQGNLEAHSNGFRFITTRRDTVLDIMYNNIKHAIFQPCE-KEIMVLIHFHLKNPIMVFKKKQKDIQFYTEVIDASLQVSDQRRSMYDPDEMDDEQRERQLRKRLNEAFKDFCRKVETVSKKNGYGVEFDIPYRDLGFEGTPHKEMVFIQPTLNCIVNLTETPFFCADLSEVDHVHFERVTFHSKAFDIVMINKDHTKQ----PWRIDMIPNTDKDSIQDWLTDMDISYTEGPMNLNWKSIMGTVAGDDRFYMNTEDDEVTPKEAGWEFLRMQGRDDD 618
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: B7FSR1_PHATC (FACT complex subunit n=5 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSR1_PHATC) HSP 1 Score: 487 bits (1253), Expect = 1.780e-155 Identity = 291/636 (45.75%), Postives = 414/636 (65.09%), Query Frame = 1
Query: 4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKGSPYAAD---TFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRL-RDRGVNAEQQEQANAREQRMSELLKKRARERAAKMAGAQTGQDDEGEGN-VEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDDE 1890
+ LGFA G DF+++A LT KN A + MVF L+IGFQN+ + +++R +P + T+++ ++D V + + A +V TK G++ DV+YNIN +D D XXXXXXXXX ++RL +D + E RE+R L+ +R ER ++A A + D E VE+L+SY + +YP + PN++ VDM + V++PI G PVPF I TIKNVVMP+ D+ + LRINF+ G ++GK+A M +LV+K+AP +F++E+T+RSL+ NLT AFRQI ELRKR R +E EEA LV Q+KL++ K+ +VP+L+DLT+RP G KT G+LEAH NGLRF+S R E++D++Y N+K+A +QPCEG D V++HFHLKNPIMVGKK H DIQ +TE ++++ +D ARRS YDPDE+ +EQR+RQ++K+LN AFK+F KV V ++ GH+LEFDIPY++LGF G P +EMV + PT + LVN+T++PFFVV L+ ++HVHFERV SK DM ++ + K+ P ++MI + I WL D ITYT+ NWK + V+ D+RFY++T+ D K AGW LRM G +DE
Sbjct: 366 KNLGFATGLDFRDNAFLLTPKNTASFKVGMVFCLSIGFQNLTLSESDRASTPDKSQQLSTYALVVSDMVSVTTNTA-DVMTKMGKNLTDVAYNIN--EDAD--------------------------EXXXXXXXXXXESSSRLAKDAAAMQDANEGVVERERRQISLMTRRNEERLRELARANRKKGDNDENXXVEELESYKRTRDYPDNVQPNQVKVDMASKCVVLPICGNPVPFHISTIKNVVMPDADNAT-LLRINFYTAGMAVGKDAPENMVKLVQKYAPYASFVREMTFRSLDGHNLTLAFRQISELRKRERQKELLQQEEATLVKQEKLIRTKNERVPRLADLTMRPVFAGRKTQGNLEAHSNGLRFISTRSEIVDIMYNNIKYAIYQPCEG-DIMVLIHFHLKNPIMVGKKKHLDIQFFTEVIEASQAVDNARRSMYDPDEMDDEQRERQLRKKLNQAFKEFCKKVDIVAKKNGHELEFDIPYRDLGFTGNPHKEMVNIVPTLNCLVNLTETPFFVVDLEHVDHVHFERVTYMSKAFDMVLVNKDFSKQ----PWRIDMIPNGDKDAIQEWLTDMEITYTEGPMNLNWKQITATVKDDDRFYMNTEEDEVTEKEAGWEFLRMFGREDE 966 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5474.1.8 >prot_P-wetherbeei_contig5474.1.8 ID=prot_P-wetherbeei_contig5474.1.8|Name=mRNA_P-wetherbeei_contig5474.1.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=715bp TRGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKback to top mRNA from alignment at P-wetherbeei_contig5474:87..3799- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5474.1.8 ID=mRNA_P-wetherbeei_contig5474.1.8|Name=mRNA_P-wetherbeei_contig5474.1.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3713bp|location=Sequence derived from alignment at P-wetherbeei_contig5474:87..3799- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5474:87..3799- >mRNA_P-wetherbeei_contig5474.1.8 ID=mRNA_P-wetherbeei_contig5474.1.8|Name=mRNA_P-wetherbeei_contig5474.1.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2145bp|location=Sequence derived from alignment at P-wetherbeei_contig5474:87..3799- (Phaeothamnion wetherbeei SAG_119_79)back to top |