mRNA_P-wetherbeei_contig5474.1.8 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5474.1.8
Unique NamemRNA_P-wetherbeei_contig5474.1.8
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A835Z130_9STRA (FACT complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z130_9STRA)

HSP 1 Score: 656 bits (1693), Expect = 7.170e-224
Identity = 374/639 (58.53%), Postives = 464/639 (72.61%), Query Frame = 1
Query:    1 TRGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKGSPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQEQANAREQRMSELLKKRARER-AAKMAGAQTGQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHA-PRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHGKTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENG--GLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDT-----DDAGDRKPAGWARLRMDGSDDE 1890
            T+ LGFALG DF+E AL + AKN A+ R+ MVF+L +G  +VPI + +RKGS Y  +TFS+ + D +L+  DE  E  TK G++W D+SY +   DD D    XXXXXXXXXXXXXXXXX   G                    +       E A A ++R +E  ++ ARER                         +     YP+DTMP+++ VDM REVVL PINGQPVPFSIHTIKNVVMPEPD+HS YLRINFFAPGQ+LGKEASR MA+LVE+    + AF+KELT+RSL+Q+NL  AFRQ+QELRKRLR REQKAVEEADLVVQ KL+++ D KVP+L+DLTLRPNL GKT G+LEAH NGLRF+S +GE +++LYAN++ A FQPCEG DTKV+LHF+L++PIMVGKKAHK++QVYTEA+DSTVNLD ARRS+YDPDE++EEQ+D++++KRLN AFKDFA+KV+KV  R    LEFDIPYKELGF+G P +EMVF+QPTT+AL+NVTD P FVV  D IEHVHFERV    +N D+KII  AN+  +     P+ +NMI+QK+LNQIMGWL DS+ITYTQ+ K WNWK +L+ VR+DERFYLDT      + G +KPAGW  LRM  SD E
Sbjct:  145 TKSLGFALGLDFRERALDINAKNAARARDGMVFSLNVGLADVPIPEEQRKGSNYKHNTFSMAIGDVLLVHKDEPAEFLTKGGKEWTDISYTL---DDSDXXXXXXXXXXXXXXXXXXXXXASAGQSSA----------------KRTGPGHAEPARAEDERAAEAAREGARERDGXXXXXXXXXXXXXXXXXXXXXXGHGPGMYYPKDTMPHQIKVDMDREVVLCPINGQPVPFSIHTIKNVVMPEPDNHSFYLRINFFAPGQALGKEASRRMAKLVERFGRDKQAFVKELTFRSLDQQNLGMAFRQVQELRKRLRLREQKAVEEADLVVQAKLIRMTDMKVPRLADLTLRPNLTGKTTGALEAHTNGLRFISIKGESVEILYANIRLAVFQPCEGNDTKVVLHFYLRHPIMVGKKAHKNVQVYTEAVDSTVNLDNARRSHYDPDEIMEEQQDKKLRKRLNQAFKDFAAKVSKVAARNQQTLEFDIPYKELGFQGTPHKEMVFIQPTTYALLNVTDQPAFVVLTDDIEHVHFERVNPNGRNFDLKIITRANVAADQPPSEPLSINMIEQKFLNQIMGWLVDSSITYTQTDKTWNWKAVLNLVREDERFYLDTGKSTEQEDGTKKPAGWTFLRMQDSDGE 764          
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: D7FPY1_ECTSI (FACT complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY1_ECTSI)

HSP 1 Score: 661 bits (1705), Expect = 3.670e-223
Identity = 382/642 (59.50%), Postives = 466/642 (72.59%), Query Frame = 1
Query:    1 TRGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKG-SPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQEQANAREQRMSELLKKRARERAAKMAGAQTGQD---DEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHGKTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGK-DTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFRE------MVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQ-KYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTDDAGDRKPAGWARLRMDGSDDE 1890
            T+ LGF+LG D++ESA+ ++AKN  K+++ MVFNL++G Q+VP+  A++KG S Y  +TFSV +ADTV+++   A EV TK  ++W+D+ YN+ G D G     XXXXXXXXXXXXXXXXXX      XXXXX                                 L  RA+ERAA +     G+D   DEG   V++L +Y    +YP+   PN+L VDM +EVV  PINGQPVP SIHTIKNV  P+PD+H HYLRINFF  G SLGKEASR MA+          F+KEL YRSLE++NL + +RQIQELRKRLR REQKAVEEADLV Q KL++ KD +VP+L DLT+RP L GKT+GSLEAH NGLRF S +   LD LYAN+KHAF+QPC G  DTKVILHF LK+PIMVGKKAHK+IQV TEA+D+TVNLDG +RSNYDPDE++EEQR+R M+KR N+AFKDFASKVTK   R G  LEFDIP+ +LGF G PF+E      M F+QPTT+AL+NVTD PFFVVPL+ IEHVHFERV S+SK CDMKIIM+ NM ENGG P  ++MIDQ KYLN+IM WLE+  ITYTQ++KPWNWK M+ D+R D RFYLDT + G+RKPAGWARLR + S+DE
Sbjct:  348 TKTLGFSLGLDYRESAMVISAKNSTKMKDGMVFNLSVGLQDVPLSTADKKGGSSYQMETFSVIIADTVVVRETGA-EVLTKQSKEWKDICYNLKGDDGGSDENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGR------------------------------LPGRAKERAAALERRARGEDGSGDEGGEEVDELAAYKDPADYPRRVQPNQLFVDMEKEVVFAPINGQPVPLSIHTIKNVTQPDPDNHCHYLRINFFTSGASLGKEASRTMAK------DPATFVKELIYRSLERQNLDKVYRQIQELRKRLRTREQKAVEEADLVTQAKLIRSKDQRVPRLQDLTMRPTLAGKTVGSLEAHSNGLRFTSQKHAPLDFLYANIKHAFYQPCNGVIDTKVILHFSLKHPIMVGKKAHKEIQVSTEAIDATVNLDGVKRSNYDPDEMMEEQRERGMRKRRNNAFKDFASKVTKAASRDGQSLEFDIPFDQLGFGGKPFKEARTNTLMGFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSSSKTCDMKIIMKENMLENGGEPKTIDMIDQNKYLNKIMQWLEECEITYTQTAKPWNWKAMMADIRGDNRFYLDTYEDGERKPAGWARLREEDSEDE 952          
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A1Z5K1K7_FISSO (FACT complex subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1K7_FISSO)

HSP 1 Score: 514 bits (1325), Expect = 7.440e-166
Identity = 354/711 (49.79%), Postives = 482/711 (67.79%), Query Frame = 1
Query:    4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKG----SPYAA-DTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXX-GLGAYDXXXXXXXXXXR-TTRL-RDRGVNAEQQEQANAREQRMSELLKKRARERAAKMAGAQTGQ-DDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDDEXXXXXXXXXXXXXXXXXXXXXXXXXX----ESFXXXXXXXXEGGDDALSEEGEDWDELERKAARDDHDSKR 2091
            + LGFA G DF+ES++ LT KN +  ++ MVF L++GFQ++ + +A+R      SP     +F++ ++D V I AD  P+V TK G+D  DVSYNIN  ++G+GS  XXXXXXXXXXX        G   Y           R ++RL +D     + QE    RE+R  +L+++R  ER  ++A A   + DD+ +   E+L++Y +  +YP + +PN++ VDM  + V +PI G P+PF I TIKNVVMPE DS +  LRINF+  G ++GK+A   M +LV+K+AP  +FI+ELT+RSL+  NLTQAFRQI ELRKR+R +E +  EEADLV Q+KLV+ K+ +VP+L+D+T+RP   G KT G+LEAH NG+RF+S R E++DV+Y+N+K+A +QPCE  +  V++HFHLKNPIM+GKK H D+Q YTE +DS+  +D +RRS YDPDE+ +EQR+RQM+K+LN AFKDF  KV  V ++ G++LEFDIPY++LGF G P +EMV + PT + LVN+T++PFFVV L  ++HVHFERV   SK  DM ++ +   KE    P  V+MI     + I  WL D  ITYT+     NWK ++  VR D+RFY++T+ D+   K AGW  LRM G DD XXXXXXXXXXX   XXXXXXXXXXXX    +S XXXXXXXX      L EEG DWDE+E KAA +D   +R
Sbjct:  359 KNLGFASGLDFRESSMLLTPKNMSVFKQGMVFCLSVGFQDLELSEADRSAVNDKSPIKKLSSFALLVSDMVAITADN-PDVMTKMGKDLTDVSYNIN--EEGEGSXXXXXXXXXXXXXVEAPDAPKGDEKYARSLANQRGGVRQSSRLAKDAAAMQDAQEGVAERERRQIKLMERRNEERLRELARANRKKGDDDNKDQAEELEAYKRTRDYPDNILPNQVKVDMANQCVFLPIYGNPIPFHISTIKNVVMPEGDSAT-LLRINFYTAGMAVGKDAPANMVKLVQKYAPYASFIRELTFRSLDGHNLTQAFRQISELRKRVRTKELQQQEEADLVEQEKLVRTKNERVPRLADVTMRPVFAGRKTQGNLEAHSNGMRFISTRQEIVDVMYSNIKYAIYQPCEN-EIMVLIHFHLKNPIMIGKKKHNDVQFYTEIVDSSQAVDNSRRSMYDPDEMDDEQRERQMRKKLNQAFKDFCKKVDAVAKKNGYELEFDIPYRDLGFTGNPHKEMVTIMPTLNCLVNLTETPFFVVDLVDVDHVHFERVTYMSKAFDMVLVNKDFNKE----PWRVDMIPNGDKDSIQDWLTDMEITYTEGPMNLNWKQIIATVRADDRFYMNTEEDSVTEKEAGWEFLRMFGRDDXXXXXXXXXXXXFSQXXXXXXXXXXXXXXDFDSXXXXXXXXXXXXXXXLEEEGLDWDEMEEKAAEEDRQKRR 1060          
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A7S0GEE7_9STRA (FACT complex subunit n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEE7_9STRA)

HSP 1 Score: 498 bits (1282), Expect = 4.740e-163
Identity = 288/638 (45.14%), Postives = 406/638 (63.64%), Query Frame = 1
Query:    4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAER-----KGSPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQ-QEQANAREQRMSELLKKRARERAAKMAGAQT---GQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSD 1884
            + LGF++G DF++SAL L+ KN   +R  M+FNL++GF  V +  +++     K +  +  T+++ +AD V++ +  A EV TK  +   D+SY I G  D D S                        Y            + RL      A+  QE A+ RE+R  EL+ ++  ER  ++A A     G D E +   E+L +Y +A +YP   MPN++ VDM  E V++PI G P+PF I TIKNVV+P+PD  + YLRINF+  G ++GK+    M +L+ KHAP  +FI+ELT+RSL+  NLTQAFRQI ELRKR+R RE +  EEA+LV Q+KLV+ K+ +VP+LSDLTLRP   G KT G++EAH NGLRF+S RGE++DV+Y+N+KHA +QPCE  +  V++HFHL+NPIM+GKK  KDIQV+TE +D+++ +D  RRS YDPDE+ +EQR+RQ++K+LN AFK+F  KV    ++ G+ LEFDIPY++LGF G P  +MVFVQPT + LVNVTD+PFFV  L  ++HVHFERV   SK  D+ +I +   K+    P  V+MI     + I  WL D  ++YT+     NWK ++     D+RFY++T+ D   +K AGW  LRM G D
Sbjct:   40 KNLGFSMGLDFRDSALVLSPKNQVMIRSGMLFNLSVGFSGVALSDSDKSSVGNKSAVKSVKTYALQVADMVVVTSKSA-EVLTKHAKALTDISYVIGG--DSDESSDEGGNASHDDAAYAKSLANQEDKYPSGKRA------SARLAKNNTGAQDTQEGASERERRQVELMSRKNEERIRELARANAKNKGADKESD-LAEELITYNRARDYPDYVMPNQVKVDMKNECVILPIFGNPIPFHISTIKNVVLPDPDLAT-YLRINFYTAGSTIGKDTPVNMGKLILKHAPYASFIRELTFRSLDSHNLTQAFRQISELRKRVRQREIREQEEANLVKQEKLVRTKNERVPRLSDLTLRPVFSGRKTQGNIEAHTNGLRFISTRGEIVDVMYSNIKHAIYQPCEN-EIMVLIHFHLRNPIMLGKKRQKDIQVFTEVVDASLQVDAGRRSMYDPDEMDDEQRERQLRKKLNQAFKEFCRKVESTAKKNGYSLEFDIPYRDLGFNGTPHNQMVFVQPTLNCLVNVTDTPFFVTDLSEVDHVHFERVTFMSKTFDVVLINKDFSKQ----PWRVDMIPNSDKDAIQDWLTDMELSYTEGPMNLNWKQIMLTCAGDDRFYMNTEEDEITQKEAGWEFLRMFGRD 661          
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A7S4JB19_9STRA (FACT complex subunit (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JB19_9STRA)

HSP 1 Score: 495 bits (1274), Expect = 2.120e-158
Identity = 286/642 (44.55%), Postives = 412/642 (64.17%), Query Frame = 1
Query:    4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGK-----AERKGSPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGD----DGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQ-EQANAREQRMSELLKKRARERAAKMAGA--QTGQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDD 1887
            + LGF++G DF+E++L L+AKN A LR  MVFN+A+GF NV +       A  K +  +   + + ++D V +      ++ TK  +   D+SY IN  +    D D   A                  G G              + RL    V  ++  E A  R++R  EL+ +R  ER  ++A A  + GQD E E   E+L++Y +  +YP + +PN++ VDM  + V++P+ G PVPF I TIKN V+PE D+ + YLRINF+  G +LGK+A +  A LV+++AP  +FI+E+T+RSLE  NLTQA+RQIQELRKR R +E +  EEADLV Q+KLV+ K  +VP+L+DLT+RP   G KT G+LE+H NG+RF+S RGEV+D++YAN+KHA FQPCE ++  V++HFHLKNPIM+GKK   DIQ +TE +D++  +DGARRS YDPDE+ +EQR+RQ+++RLN AFK+F  K+  V ++ G+ LEFD+PY++LGF+G P +EMVF+ PT + LVN+T++PFFVV L  ++HVHFERV   SK  D+ +I +   K+    P  V+MI     + I  WL D  ++YT+     NWK +++ V+ D+RFY++T+ D    K AGW  LRM G DD
Sbjct:  359 KNLGFSVGLDFREASLVLSAKNPAILRPGMVFNVAVGFANVELSDKGRDAANSKSAVKSLKKYGLIISDMVTVTG-RGSDMLTKHSKALTDISYLINDDENASSDDDAPDAPDGDEALARTLAKAQEDTGNGQ-----------RMSARLARNAVAIQESVEGAAERQRRQIELMARRNEERLRELARANKKKGQDGETE-KAEELETYMRTKDYPDNVLPNQVKVDMANKCVILPVCGNPVPFHISTIKNCVLPEADAAT-YLRINFYTAGMALGKDAPKNTAMLVQRYAPYASFIREMTFRSLEPHNLTQAYRQIQELRKRERQKELREQEEADLVKQEKLVRTKTERVPRLADLTMRPVFAGRKTQGNLESHTNGMRFISTRGEVVDIMYANIKHAIFQPCE-QEIMVLVHFHLKNPIMLGKKKQADIQFFTEVVDASQAVDGARRSMYDPDEMDDEQRERQLRRRLNEAFKEFCRKMEAVARKNGYSLEFDLPYRDLGFQGNPHKEMVFITPTLNCLVNLTETPFFVVDLSDVDHVHFERVTFASKALDIVLIPKDFSKQ----PWRVDMIPNDNKDSIQEWLTDMELSYTEGPMNLNWKQIMETVKSDDRFYMNTEEDEVTEKEAGWEFLRMYGHDD 981          
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: B8C213_THAPS (FACT complex subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C213_THAPS)

HSP 1 Score: 491 bits (1265), Expect = 2.920e-157
Identity = 320/717 (44.63%), Postives = 453/717 (63.18%), Query Frame = 1
Query:    4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKGSPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQEQANAREQRMSELLKKRARERAAKMAGAQTGQD-DEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDDEXXXXXXXXXXXXXXXXXXXXXXXXXXE---SFXXXXXXXXEGGDDALSEEGEDWDELERKAARDDHDSKRQHEEEDNRASKKQRR 2136
            + LGF++G DF++  L L +K+    R+ MVFNLA+    + +  A    S   ++ + + +ADTV++  + A +  TK G+D  D+SY IN  DD +    XXXXXXXX                          R+ RL     +A++ E A  RE++  +L+ ++  ER  ++A A   +  DE     E+L++Y +  + P + +PN++ VDM  + V++PI G PVPF I TIKNVV+P+PDS + YLRINF+  G ++GK+A     +L++K++P   FI+E+T+RSL+  +LT AFRQI ELRKR R +E +  EEA+LV QDKLV+ K+ +VP+LSDLT+RP   G KT G++EAH NGLRF+S+RGE++DV+Y+N+KHA FQPCE  +  V++HFHLKNPIMVGKK  +DIQ +TE +D++  +D  +RS YDPDE+ +EQR+RQ++KRLN AFK+F  KV  V ++ G+ LEFDIPY++LGF G P +EMVF+QPT + L N+T++PFFVV L  ++HVHFERV   SK  DM +I +   K+    P  V+MI     + I  WL D  I+YT+     NWK ++  V  D+RFY+DT+ D    K AGW  LRM G DD             XXXXXXXXXXXXXX     F           D+ L E+G DWDE+ER+AA DD   KR  ++E  R +K+++R
Sbjct:  357 KSLGFSIGLDFRDPLLVLNSKSTVTFRKGMVFNLAVSLAGIKLSAAVNSKSADLSE-YGLVVADTVVLHENGA-DAMTKYGKDLTDISYTIN--DDEEXXXXXXXXXXXXAKLAKKLAKE-------EELDPSGGRRSGRLAANMSSAQETEGAAERERKQIDLMARKNEERLRELARASKKKGGDEKAKKAEELEAYKRTKDLPDNVLPNQVKVDMANQCVILPICGNPVPFHISTIKNVVLPDPDSAA-YLRINFYTAGMAVGKDAPENTVKLIQKYSPYATFIREMTFRSLDSHSLTTAFRQISELRKRARMKELQDQEEANLVKQDKLVRTKNERVPRLSDLTMRPVFAGRKTQGNIEAHSNGLRFISSRGEIVDVMYSNIKHAIFQPCES-EIMVLIHFHLKNPIMVGKKKQQDIQFFTEVVDASQAVDAGKRSMYDPDEMDDEQRERQLRKRLNEAFKEFCRKVESVARKNGYSLEFDIPYRDLGFTGNPHKEMVFIQPTLNCLCNLTETPFFVVDLSLVDHVHFERVTFMSKAFDMVLINKDFTKQ----PWRVDMIPNDDKDSIQEWLTDMEISYTEGPMNLNWKQIMSTVDGDDRFYMDTEEDEVTPKEAGWEFLRMFGKDDADSGESEENDSGYXXXXXXXXXXXXXXXXXXDFDSEDSGSEFDADEDLEEQGMDWDEMEREAAADDRRKKRDGDDEPARPAKRRQR 1056          
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A7S1BP25_9STRA (FACT complex subunit n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BP25_9STRA)

HSP 1 Score: 493 bits (1268), Expect = 1.340e-156
Identity = 295/641 (46.02%), Postives = 428/641 (66.77%), Query Frame = 1
Query:    4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAER-----KGSPYAADTFSVTLADTVLIK-ADE-APEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVN-AEQQEQANAREQRMSELLKKRARERAAKMAGAQT-GQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHGKTL-GSLEAHLNGLRFVSNRGE-VLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDT-DDAGDRKPAGWARLRMDGSDDE 1890
            + LGFA G DF++S+L LTAKN +  R  MVF L++G  N+P+  A++     K +    + +++ +ADTV++K +DE + EV+TK  +   D+SY IN       + +    XXXXXXXXXXXXXX  G              ++RL   G++ A+  E A  RE++   L++++  ER  ++A A + G++       ++L++Y    +YP   +P ++ VDM  E V++PI G PVPF I TIK+VV+P+PD  + YLRINF++ GQ+L K+A   + +L++KHAP   FI+E+T+RSL+ +NLTQAFRQ+ ELRKR+R REQK  EEA+LV Q+ LV+ K+ +VP+LSDL++RP L G+ + G+LEAH NG RF++ R + VLD++Y N+KHA FQPCE K+  V++HFHLKNPIMV KK  KDIQ YTE +D+++ +   RRS YDPDE+ +EQR+RQ++KRLN AFKDF  KV  V+++ G+ +EFDIPY++LGFEG P +EMVF+QPT + +VN+T++PFF   L  ++HVHFERV   SK  D+ +I + + K+    P  ++MI     + I  WL D  I+YT+     NWK ++  V  D+RFY++T DD    K AGW  LRM G DD+
Sbjct:  414 KNLGFATGLDFRDSSLLLTAKNPSLFRPGMVFVLSVGLANLPLKAADKENVSDKSAVKNLENYALVIADTVVLKNSDEGSAEVFTKHSKSLTDISYTIN-------NNSSDEDXXXXXXXXXXXXXXXXGPKLGSKVTSGGTRASSRLASTGIDMADALEGAAERERKQMALMERKNEERLRELARANSKGKNXXXNEEAQELRTYPYPKDYPDSVLPTQVKVDMVSECVILPITGTPVPFHISTIKSVVLPDPD-RATYLRINFYSSGQALTKDAPTNIVKLIQKHAPYATFIREMTFRSLDSQNLTQAFRQVSELRKRVRQREQKEQEEANLVKQETLVRTKNERVPRLSDLSMRPVLQGRKMQGNLEAHSNGFRFITTRRDTVLDIMYNNIKHAIFQPCE-KEIMVLIHFHLKNPIMVFKKKQKDIQFYTEVIDASLQVSDQRRSMYDPDEMDDEQRERQLRKRLNEAFKDFCRKVETVSKKNGYGVEFDIPYRDLGFEGTPHKEMVFIQPTLNCIVNLTETPFFCADLSEVDHVHFERVTFHSKAFDIVMINKDHTKQ----PWRIDMIPNTDKDSIQDWLTDMDISYTEGPMNLNWKSIMGTVAGDDRFYMNTEDDEVTPKEAGWEFLRMQGRDDD 1041          
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A6S9A9U8_9STRA (FACT complex subunit n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9A9U8_9STRA)

HSP 1 Score: 489 bits (1259), Expect = 6.850e-156
Identity = 290/639 (45.38%), Postives = 414/639 (64.79%), Query Frame = 1
Query:    4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGK-----AERKGSPYAADTFSVTLADTVLIKAD-EAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVNAEQQEQANA-REQRMSELLKKRARERAAKMAGAQTGQDDEGEGN-VEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDDE 1890
            + LGF++G DF++  L L+AKN    R  MVF L++GF  VP+       A  K +      + + ++D V+I  + ++ EV TK G+   D+SY IN          XXXXXXXXXXXX                      R++RL       +   +  A RE+R   L+ ++  ER  ++A +   + D+GE +  E+L++Y +  +YP   +PN++ VDM  + V++PI G PVPF I TIKNVV+P+PDS + YLRINF+  G ++GK+A   MA+LV+K+AP  +FI+E+T+RSL+  NLTQAFRQI ELRKR R +E + +EEA+LV Q KLV+ K  +VP+LSDLT+RP   G KT G+LEAH NGLRF+S RGE++D++Y N+KHA FQPCE  +  V++HFHL++PIM+GKK  +DIQ +TE +D++  +D  RRS YDPDE+ +EQR+RQ++++LN AFK+F  KV  V ++ G  LEFDIPY++LGF G P +EMVF+QPT + LVN+T++PFFVV L  ++HVHFERV   SK  D+ +I +   K+    P  V+MI       I  WL D  ++YT+     NWK ++  V  D+RFY+DT+ D   +K AGW+ LRM G+D+E
Sbjct:  361 KNLGFSIGLDFRDPNLVLSAKNSIHFRPGMVFTLSVGFAGVPLSDSAKSAANSKSAVKDIKEYGLLISDMVVISENSKSGEVMTKHGKSLTDISYTINDXX----XXXXXXXXXXXXXXXNGDEEYARKVAKAPDNVVNGKRRSSRLESTNEAIQNAHEGTAERERRQIALMTRKNEERLRELARSARNKGDDGESDKAEELRAYDRTKDYPDSVLPNQVKVDMVNQCVILPICGNPVPFHISTIKNVVLPDPDSAT-YLRINFYTAGMAVGKDAPANMAKLVQKYAPYASFIREMTFRSLDSHNLTQAFRQISELRKRARQKELRELEEANLVKQAKLVRTKTERVPRLSDLTMRPVFAGRKTQGNLEAHSNGLRFISMRGEIVDIMYPNIKHAIFQPCEN-EIMVLVHFHLRHPIMLGKKKQQDIQFFTEVIDASQTVDAGRRSMYDPDEMDDEQRERQLRRKLNEAFKEFCRKVENVAKKNGFSLEFDIPYRDLGFNGNPHKEMVFIQPTLNCLVNLTETPFFVVNLSDVDHVHFERVTFMSKAFDIVLINKDFSKQ----PWRVDMIPNDDKESIQEWLTDMELSYTEGPMNLNWKQIMGTVAGDDRFYMDTEEDEVTKKEAGWSFLRMFGNDEE 989          
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: A0A7S1BQI3_9STRA (FACT complex subunit n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQI3_9STRA)

HSP 1 Score: 478 bits (1229), Expect = 1.220e-155
Identity = 288/631 (45.64%), Postives = 419/631 (66.40%), Query Frame = 1
Query:   34 FKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAER-----KGSPYAADTFSVTLADTVLIK-ADE-APEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRLRDRGVN-AEQQEQANAREQRMSELLKKRARERAAKMAGAQT-GQDDEGEGNVEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHGKTL-GSLEAHLNGLRFVSNRGE-VLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDT-DDAGDRKPAGWARLRMDGSDDE 1890
            F++S+L LTAK     R  MVF L++G  N+P+  A++     K +    + +++ +ADTV++K +DE + EV+TK  +   D+SY IN       + +    XXXXXXXXXXXXXX  G              ++RL   G++ A+  E A  RE++   L++++  ER  ++A A + G++       ++L++Y    +YP   +P ++ VDM  E V++PI G PVPF I TIK+VV+P+PD  + YLRINF++ GQ+L K+A   + +L++KHAP   FI+E+T+RSL+ +NLTQAFRQ+ ELRKR+R REQK  EEA+LV Q+ LV+ K+ +VP+LSDL++RP L G+ + G+LEAH NG RF++ R + VLD++Y N+KHA FQPCE K+  V++HFHLKNPIMV KK  KDIQ YTE +D+++ +   RRS YDPDE+ +EQR+RQ++KRLN AFKDF  KV  V+++ G+ +EFDIPY++LGFEG P +EMVF+QPT + +VN+T++PFF   L  ++HVHFERV   SK  D+ +I + + K+    P  ++MI     + I  WL D  I+YT+     NWK ++  V  D+RFY++T DD    K AGW  LRM G DD+
Sbjct:    1 FRDSSLFLTAKIPYLFRPGMVFVLSVGLANLPLKAADKENVSDKSAVKNLENYALVIADTVVLKNSDEGSAEVFTKHSKSLTDISYTIN-------NNSSDEDXXXXXXXXXXXXXXXXGPKLGSKVTSGGTRASSRLASTGIDMADALEGAAERERKQMALMERKNEERLRELARANSKGKNXXXNEEAQELRTYPYPKDYPDSVLPTQVKVDMVSECVILPITGTPVPFHISTIKSVVLPDPD-RATYLRINFYSSGQALTKDAPTNIVKLIQKHAPYATFIREMTFRSLDSQNLTQAFRQVSELRKRVRQREQKEQEEANLVKQETLVRTKNERVPRLSDLSMRPVLQGRKMQGNLEAHSNGFRFITTRRDTVLDIMYNNIKHAIFQPCE-KEIMVLIHFHLKNPIMVFKKKQKDIQFYTEVIDASLQVSDQRRSMYDPDEMDDEQRERQLRKRLNEAFKDFCRKVETVSKKNGYGVEFDIPYRDLGFEGTPHKEMVFIQPTLNCIVNLTETPFFCADLSEVDHVHFERVTFHSKAFDIVMINKDHTKQ----PWRIDMIPNTDKDSIQDWLTDMDISYTEGPMNLNWKSIMGTVAGDDRFYMNTEDDEVTPKEAGWEFLRMQGRDDD 618          
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Match: B7FSR1_PHATC (FACT complex subunit n=5 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSR1_PHATC)

HSP 1 Score: 487 bits (1253), Expect = 1.780e-155
Identity = 291/636 (45.75%), Postives = 414/636 (65.09%), Query Frame = 1
Query:    4 RGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERKGSPYAAD---TFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDGSGAXXXXXXXXXXXXXXXXXXGLGAYDXXXXXXXXXXRTTRL-RDRGVNAEQQEQANAREQRMSELLKKRARERAAKMAGAQTGQDDEGEGN-VEDLKSYAKADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHSHYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLTQAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRPNLHG-KTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVILHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQRDRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMVFVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANMKENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRKDERFYLDTD-DAGDRKPAGWARLRMDGSDDE 1890
            + LGFA G DF+++A  LT KN A  +  MVF L+IGFQN+ + +++R  +P  +    T+++ ++D V +  + A +V TK G++  DV+YNIN  +D D                            XXXXXXXXX  ++RL +D     +  E    RE+R   L+ +R  ER  ++A A   + D  E   VE+L+SY +  +YP +  PN++ VDM  + V++PI G PVPF I TIKNVVMP+ D+ +  LRINF+  G ++GK+A   M +LV+K+AP  +F++E+T+RSL+  NLT AFRQI ELRKR R +E    EEA LV Q+KL++ K+ +VP+L+DLT+RP   G KT G+LEAH NGLRF+S R E++D++Y N+K+A +QPCEG D  V++HFHLKNPIMVGKK H DIQ +TE ++++  +D ARRS YDPDE+ +EQR+RQ++K+LN AFK+F  KV  V ++ GH+LEFDIPY++LGF G P +EMV + PT + LVN+T++PFFVV L+ ++HVHFERV   SK  DM ++ +   K+    P  ++MI     + I  WL D  ITYT+     NWK +   V+ D+RFY++T+ D    K AGW  LRM G +DE
Sbjct:  366 KNLGFATGLDFRDNAFLLTPKNTASFKVGMVFCLSIGFQNLTLSESDRASTPDKSQQLSTYALVVSDMVSVTTNTA-DVMTKMGKNLTDVAYNIN--EDAD--------------------------EXXXXXXXXXXESSSRLAKDAAAMQDANEGVVERERRQISLMTRRNEERLRELARANRKKGDNDENXXVEELESYKRTRDYPDNVQPNQVKVDMASKCVVLPICGNPVPFHISTIKNVVMPDADNAT-LLRINFYTAGMAVGKDAPENMVKLVQKYAPYASFVREMTFRSLDGHNLTLAFRQISELRKRERQKELLQQEEATLVKQEKLIRTKNERVPRLADLTMRPVFAGRKTQGNLEAHSNGLRFISTRSEIVDIMYNNIKYAIYQPCEG-DIMVLIHFHLKNPIMVGKKKHLDIQFFTEVIEASQAVDNARRSMYDPDEMDDEQRERQLRKKLNQAFKEFCKKVDIVAKKNGHELEFDIPYRDLGFTGNPHKEMVNIVPTLNCLVNLTETPFFVVDLEHVDHVHFERVTYMSKAFDMVLVNKDFSKQ----PWRIDMIPNGDKDAIQEWLTDMEITYTEGPMNLNWKQITATVKDDDRFYMNTEEDEVTEKEAGWEFLRMFGREDE 966          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5474.1.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z130_9STRA7.170e-22458.53FACT complex subunit n=1 Tax=Tribonema minus TaxID... [more]
D7FPY1_ECTSI3.670e-22359.50FACT complex subunit n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A1Z5K1K7_FISSO7.440e-16649.79FACT complex subunit n=2 Tax=Fistulifera solaris T... [more]
A0A7S0GEE7_9STRA4.740e-16345.14FACT complex subunit n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4JB19_9STRA2.120e-15844.55FACT complex subunit (Fragment) n=1 Tax=Odontella ... [more]
B8C213_THAPS2.920e-15744.63FACT complex subunit n=1 Tax=Thalassiosira pseudon... [more]
A0A7S1BP25_9STRA1.340e-15646.02FACT complex subunit n=2 Tax=Corethron hystrix Tax... [more]
A0A6S9A9U8_9STRA6.850e-15645.38FACT complex subunit n=3 Tax=Ditylum brightwellii ... [more]
A0A7S1BQI3_9STRA1.220e-15545.64FACT complex subunit n=1 Tax=Corethron hystrix Tax... [more]
B7FSR1_PHATC1.780e-15545.75FACT complex subunit n=5 Tax=Phaeodactylum tricorn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5474contigP-wetherbeei_contig5474:87..3799 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FPY1
Preferred nameSPT16
PFAMsFACT-Spt16_Nlob,Peptidase_M24,Rtt106,SPT16
Model size2145
Max annot lvl2759|Eukaryota
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000785,GO:0000790,GO:0000791,GO:0001672,GO:0003006,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005719,GO:0005730,GO:0006139,GO:0006325,GO:0006333,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008023,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010228,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022414,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031491,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0035101,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0061458,GO:0065007,GO:0070013,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902275,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons7
Evalue6.01e-224
EggNOG OGsCOG5406@1|root,KOG1189@2759|Eukaryota
Ec32 ortholog descriptionFACT complex subunit SPT16
Ec32 orthologEc-01_008230.1
EC3.6.4.12
DescriptionFact complex subunit
Cds size2145
COG categoryBKL
BRITEko00000,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5474.1.8prot_P-wetherbeei_contig5474.1.8Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5474 87..3799 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186817.3046045-CDS-P-wetherbeei_contig5474:86..2871683186817.3046045-CDS-P-wetherbeei_contig5474:86..287Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5474 87..287 -
1683186817.3180935-CDS-P-wetherbeei_contig5474:518..8091683186817.3180935-CDS-P-wetherbeei_contig5474:518..809Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5474 519..809 -
1683186817.3280747-CDS-P-wetherbeei_contig5474:998..13911683186817.3280747-CDS-P-wetherbeei_contig5474:998..1391Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5474 999..1391 -
1683186817.3501875-CDS-P-wetherbeei_contig5474:1609..19481683186817.3501875-CDS-P-wetherbeei_contig5474:1609..1948Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5474 1610..1948 -
1683186817.366048-CDS-P-wetherbeei_contig5474:2254..25881683186817.366048-CDS-P-wetherbeei_contig5474:2254..2588Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5474 2255..2588 -
1683186817.376055-CDS-P-wetherbeei_contig5474:2876..32351683186817.376055-CDS-P-wetherbeei_contig5474:2876..3235Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5474 2877..3235 -
1683186817.3846273-CDS-P-wetherbeei_contig5474:3571..37991683186817.3846273-CDS-P-wetherbeei_contig5474:3571..3799Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5474 3572..3799 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5474.1.8

>prot_P-wetherbeei_contig5474.1.8 ID=prot_P-wetherbeei_contig5474.1.8|Name=mRNA_P-wetherbeei_contig5474.1.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=715bp
TRGLGFALGSDFKESALGLTAKNGAKLREDMVFNLAIGFQNVPIGKAERK
GSPYAADTFSVTLADTVLIKADEAPEVWTKTGRDWQDVSYNINGGDDGDG
SGADGENGAANGNGGGRASANGLGAYDDDDGGAGGGGRTTRLRDRGVNAE
QQEQANAREQRMSELLKKRARERAAKMAGAQTGQDDEGEGNVEDLKSYAK
ADEYPQDTMPNKLSVDMTREVVLVPINGQPVPFSIHTIKNVVMPEPDSHS
HYLRINFFAPGQSLGKEASRVMARLVEKHAPRCAFIKELTYRSLEQRNLT
QAFRQIQELRKRLRGREQKAVEEADLVVQDKLVKLKDGKVPKLSDLTLRP
NLHGKTLGSLEAHLNGLRFVSNRGEVLDVLYANVKHAFFQPCEGKDTKVI
LHFHLKNPIMVGKKAHKDIQVYTEAMDSTVNLDGARRSNYDPDELLEEQR
DRQMKKRLNHAFKDFASKVTKVTQRQGHDLEFDIPYKELGFEGAPFREMV
FVQPTTHALVNVTDSPFFVVPLDAIEHVHFERVLSTSKNCDMKIIMEANM
KENGGLPMEVNMIDQKYLNQIMGWLEDSAITYTQSSKPWNWKMMLDDVRK
DERFYLDTDDAGDRKPAGWARLRMDGSDDEDDDDSEQSDEDFQSAEGEDE
DEEDDDESFDEDSDSDAEGGDDALSEEGEDWDELERKAARDDHDSKRQHE
EEDNRASKKQRRNR*
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mRNA from alignment at P-wetherbeei_contig5474:87..3799-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5474.1.8 ID=mRNA_P-wetherbeei_contig5474.1.8|Name=mRNA_P-wetherbeei_contig5474.1.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3713bp|location=Sequence derived from alignment at P-wetherbeei_contig5474:87..3799- (Phaeothamnion wetherbeei SAG_119_79)
ACCAGGGGCCTGGGGTTCGCACTGGGTTCGGACTTCAAGGAGTCGGCGCT GGGCCTCACGGCCAAGAACGGCGCCAAGCTGCGTGAGGACATGGTCTTCA ATCTCGCCATCGGCTTCCAGAACGTGCCCATCGGCAAGGCCGAGCGGAAA GGGTCACCGTACGCGGCCGACACGTTCAGTGTCACGCTCGCGGACACCGT CCTCATCAAGGCCGACGAGGCCCCCGAGGTGGGTGGTAGCCTCAGCTTGG TGCGGCTCGGTTCTGTGCGTCTCTCGGAGATGCGAGCAGCGTGCCGGAGA AGGCAGCCGTTGAAGGAGGGATTGCCAGCTCGCGGCTAATTGAGTAGCGT GTGCGGTTTTGGGCGGACACGATGGTTTGGCGGCTGCGCAGCTCGAGGCG GTTCTTTGGTAGTAGCGGCGGCGGCTGTCGCGGTAACTATTGACTTTTTT TGCTATCTAGGCCATCATTGTTCCATGTCATCATGGTTCCATGTCCGTCT CGGCCGATGTGTTTCATGCTTGCTTTTTCTGTGCCTCCTCTCTGCTCTCC TTCCAAAAACACAGGTGTGGACGAAGACGGGTCGCGACTGGCAGGACGTC AGCTACAACATCAACGGCGGCGATGACGGCGACGGCAGCGGCGCCGATGG CGAAAATGGCGCCGCCAATGGCAACGGCGGCGGCCGTGCCTCGGCCAATG GCCTCGGCGCTTACGACGACGACGACGGCGGTGCCGGCGGCGGCGGGCGC ACTACGCGGCTGCGGGACCGCGGCGTGAATGCGGAACAACAGGAGCAGGC CAACGCGCGCGAGCAACGCATGTCGGAGCTGCTCAAGAAGCGGGCGCGGG AGCGAGCGGCAAAGATGGCCGGCGCGCAGACTGGCCAGGACGACGAGGGA GAGGGCAACGTCGAGGACCTAAAGTGAATTTTACTGCATCGGCTGTCGTT GATTGGTTTGTATTTTCGGTCTCTGTTTCGCTTTCAGTTCCGGTTCGATT GGGTCCAGTTTTTCGGTTTGGTCGCACCGATCTCGCAGGGTCATTTGGTT TTCGCGCCGCCCTTTACCGCCATGGCATTCCACCGCGTGATTCACGTGAC TGACGATCGCGATAACATTCGCGCTCCCCTGCCGCCGCCGCCGCCGCCGT CGTCGCCGCCACTTCCCGCGCTTGTCCGCTGCCGTTACCGCCGCTACCAT GATTTAAAAAGGTCATACGCCAAGGCGGACGAGTATCCGCAGGACACCAT GCCCAACAAGCTCAGCGTGGACATGACGCGCGAGGTGGTGCTGGTGCCCA TCAACGGCCAGCCTGTGCCCTTCAGCATCCACACCATTAAGAACGTGGTC ATGCCCGAGCCCGATAGCCACTCCCACTACCTGCGCATTAACTTCTTCGC TCCGGGGCAGTCGCTCGGCAAGGAGGCCAGCCGCGTCATGGCCCGCCTGG TGGAGAAGCACGCGCCGCGCTGCGCCTTCATCAAGGAGCTGACGTACCGC TCGCTCGAGCAGCGCAACCTCACGCAGGCTTTCCGGCAGATCCAGGTCAG AGGCGAGGAGAAAGACGTGAAAAGAGAAAGGATGGGCAGGCAGGCGGCGG CGCAAGTGCATTTGTGGACGATTTGGGCTGTCCGTGCAGTAGTGGAAAGT TGTTTCCGCATCGTGGCTTTTTGCTTCCCTTTTTTCTTGTTTTCTTTTTT CCTTTTCTCCGTTCTATCATGATTCGGACTTCCTGGATCCCTTGGGAGGC AGTGGTTCGGTGCTGTGCATAGGAGCGACTAGGGCCTTGCTTTTGTTTCC TTCCTTTCCTTCCGTCCTTTCGTTTGGCGCTTGCCTCCCCCCTCGCTGTA GGAGCTACGGAAGCGGCTGCGGGGCCGAGAGCAGAAGGCGGTGGAGGAGG CCGACCTAGTGGTGCAGGACAAGCTGGTCAAGCTGAAGGATGGCAAGGTC CCCAAGCTCAGCGACCTGACGCTGCGCCCCAACCTGCACGGCAAGACGCT GGGCTCCCTCGAGGCGCACCTGAACGGGCTGCGCTTCGTGTCGAACCGCG GCGAGGTGCTGGATGTGCTGTATGCCAACGTGAAGCACGCCTTCTTCCAG CCTTGCGAGGGCAAGGATACCAAGGTCATCCTGCACTTCCATCTTAAGAA CCCCATCATGGTCGGCAAGAAGGCCCACAAGGACATCCAGGTGCGGCGGC AGTGGGCTGCAGGACAGACTACTGTCCATTTGGAGGTTTGTGTGCTTGTT TGCTTGGTGCGGTGGTTTTACTTCGGGTATACGACTGGGGCGGTCGCTAT TTCTTTTTCCAGACTTTGCTGGTTAGCAGCTGCTCATCATCGTCCCGCCG CCACTGATCGCCGTCCGAAACACACTAAAAACGCCAATGCTTACCATGCT TACCACAGGTGTACACGGAGGCGATGGACTCGACAGTGAACCTGGACGGC GCGCGGCGGAGCAACTACGACCCGGACGAGCTGCTCGAGGAGCAGCGTGA CCGCCAGATGAAGAAACGCCTCAACCACGCCTTCAAGGACTTCGCTTCCA AGGTCACCAAGGTGACGCAGCGCCAGGGGCACGACCTCGAGTTCGACATT CCCTACAAGGAGCTCGGGTTCGAGGGGGCGCCGTTCCGCGAGATGGTGTT CGTGCAGCCGACGACGCACGCGCTGGTCAATGTGACGGACTCGCCGTTCT TCGTGGTGCCCCTGGACGCCATTGAACACGTGCACTTTGAGCGCGTGCTC TCGACGAGCAAGAACTGCGACATGAAGATCATCATGGAGGCCAACATGAA GGTGAGTAGGAGATGGAGCGAGGCATTGAAGTGCATTGAGGTTTGCGCAG TTTTTGCGTTCGTGTTTATTTTGCCTCACAATCTGTTACGGTGCTGGTTT GACAGTTGTGGCGCTGTGGTGGTCTATCAACCAAATTGACCGACTTTTCT GCTTCTCGCCCGTTTTGCGCTTCCTTCTTCTGATCGCCAGGAGAACGGGG GCCTGCCGATGGAGGTGAACATGATTGACCAAAAATACCTTAATCAGATC ATGGGGTGGCTCGAAGACTCGGCCATCACCTACACGCAGTCCTCCAAGCC GTGGAACTGGAAGATGATGCTCGACGACGTGCGCAAGGACGAGCGCTTCT ACCTCGACACAGACGACGCCGGCGACCGCAAGCCGGCCGGCTGGGCGCGG CTGCGGATGGACGGCAGCGACGACGAGGACGACGACGACAGCGAACAGAG CGACGAGGACTTCCAGTCCGCCGAGGGAGAGGTGAGAGAGAGGCGAGAGG GAGAATATAAAAGAGTTGGATCGTTAGGCAATTGATCGGTTTGTGTCTTC AGTTTCGCCGGCATGTGTCCAGTTCGCTTGCATTTCGTTATGCCGCCGCG GTGCGATGAGTTCTGTTTTAGATAGATTGGGTCTCTAAAACCGCCCCGAT GAATGAAATAACCGTCACAACCGCCTTTTCAATGGTATTATGGTCTGCAG GCGAGCGGGGAGGATGAGGACGAGGAGGACGACGACGAGTCGTTCGACGA AGACTCAGACAGCGACGCAGAGGGCGGCGACGACGCGCTGTCGGAGGAGG GGGAGGACTGGGACGAGCTCGAGCGCAAGGCCGCCCGGGACGACCACGAC TCCAAGCGTCAGCACGAGGAGGAGGACAACCGCGCCTCGAAGAAGCAGCG CCGGAACCGTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5474:87..3799-

>mRNA_P-wetherbeei_contig5474.1.8 ID=mRNA_P-wetherbeei_contig5474.1.8|Name=mRNA_P-wetherbeei_contig5474.1.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2145bp|location=Sequence derived from alignment at P-wetherbeei_contig5474:87..3799- (Phaeothamnion wetherbeei SAG_119_79)
ACCAGGGGCCTGGGGTTCGCACTGGGTTCGGACTTCAAGGAGTCGGCGCT
GGGCCTCACGGCCAAGAACGGCGCCAAGCTGCGTGAGGACATGGTCTTCA
ATCTCGCCATCGGCTTCCAGAACGTGCCCATCGGCAAGGCCGAGCGGAAA
GGGTCACCGTACGCGGCCGACACGTTCAGTGTCACGCTCGCGGACACCGT
CCTCATCAAGGCCGACGAGGCCCCCGAGGTGTGGACGAAGACGGGTCGCG
ACTGGCAGGACGTCAGCTACAACATCAACGGCGGCGATGACGGCGACGGC
AGCGGCGCCGATGGCGAAAATGGCGCCGCCAATGGCAACGGCGGCGGCCG
TGCCTCGGCCAATGGCCTCGGCGCTTACGACGACGACGACGGCGGTGCCG
GCGGCGGCGGGCGCACTACGCGGCTGCGGGACCGCGGCGTGAATGCGGAA
CAACAGGAGCAGGCCAACGCGCGCGAGCAACGCATGTCGGAGCTGCTCAA
GAAGCGGGCGCGGGAGCGAGCGGCAAAGATGGCCGGCGCGCAGACTGGCC
AGGACGACGAGGGAGAGGGCAACGTCGAGGACCTAAAGTCATACGCCAAG
GCGGACGAGTATCCGCAGGACACCATGCCCAACAAGCTCAGCGTGGACAT
GACGCGCGAGGTGGTGCTGGTGCCCATCAACGGCCAGCCTGTGCCCTTCA
GCATCCACACCATTAAGAACGTGGTCATGCCCGAGCCCGATAGCCACTCC
CACTACCTGCGCATTAACTTCTTCGCTCCGGGGCAGTCGCTCGGCAAGGA
GGCCAGCCGCGTCATGGCCCGCCTGGTGGAGAAGCACGCGCCGCGCTGCG
CCTTCATCAAGGAGCTGACGTACCGCTCGCTCGAGCAGCGCAACCTCACG
CAGGCTTTCCGGCAGATCCAGGAGCTACGGAAGCGGCTGCGGGGCCGAGA
GCAGAAGGCGGTGGAGGAGGCCGACCTAGTGGTGCAGGACAAGCTGGTCA
AGCTGAAGGATGGCAAGGTCCCCAAGCTCAGCGACCTGACGCTGCGCCCC
AACCTGCACGGCAAGACGCTGGGCTCCCTCGAGGCGCACCTGAACGGGCT
GCGCTTCGTGTCGAACCGCGGCGAGGTGCTGGATGTGCTGTATGCCAACG
TGAAGCACGCCTTCTTCCAGCCTTGCGAGGGCAAGGATACCAAGGTCATC
CTGCACTTCCATCTTAAGAACCCCATCATGGTCGGCAAGAAGGCCCACAA
GGACATCCAGGTGTACACGGAGGCGATGGACTCGACAGTGAACCTGGACG
GCGCGCGGCGGAGCAACTACGACCCGGACGAGCTGCTCGAGGAGCAGCGT
GACCGCCAGATGAAGAAACGCCTCAACCACGCCTTCAAGGACTTCGCTTC
CAAGGTCACCAAGGTGACGCAGCGCCAGGGGCACGACCTCGAGTTCGACA
TTCCCTACAAGGAGCTCGGGTTCGAGGGGGCGCCGTTCCGCGAGATGGTG
TTCGTGCAGCCGACGACGCACGCGCTGGTCAATGTGACGGACTCGCCGTT
CTTCGTGGTGCCCCTGGACGCCATTGAACACGTGCACTTTGAGCGCGTGC
TCTCGACGAGCAAGAACTGCGACATGAAGATCATCATGGAGGCCAACATG
AAGGAGAACGGGGGCCTGCCGATGGAGGTGAACATGATTGACCAAAAATA
CCTTAATCAGATCATGGGGTGGCTCGAAGACTCGGCCATCACCTACACGC
AGTCCTCCAAGCCGTGGAACTGGAAGATGATGCTCGACGACGTGCGCAAG
GACGAGCGCTTCTACCTCGACACAGACGACGCCGGCGACCGCAAGCCGGC
CGGCTGGGCGCGGCTGCGGATGGACGGCAGCGACGACGAGGACGACGACG
ACAGCGAACAGAGCGACGAGGACTTCCAGTCCGCCGAGGGAGAGGATGAG
GACGAGGAGGACGACGACGAGTCGTTCGACGAAGACTCAGACAGCGACGC
AGAGGGCGGCGACGACGCGCTGTCGGAGGAGGGGGAGGACTGGGACGAGC
TCGAGCGCAAGGCCGCCCGGGACGACCACGACTCCAAGCGTCAGCACGAG
GAGGAGGACAACCGCGCCTCGAAGAAGCAGCGCCGGAACCGTTGA
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