mRNA_P-wetherbeei_contig54151.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: A0A7C4TT92_9HYPH (Twin-arginine translocation signal domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TT92_9HYPH) HSP 1 Score: 77.0 bits (188), Expect = 2.840e-17 Identity = 41/57 (71.93%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 25 VDRRGFLRSIGGASVAGAAVAVGAAPPAEAAESDADKKKTRYQESDHVKAYYRTNRY 195
VDRRGFL+SIGG VA A VA + P EAAES+ADK+K RY+E+DHVKAYYRTNRY
Sbjct: 10 VDRRGFLKSIGGVGVAAATVAGLGSAPVEAAESEADKRKARYRETDHVKAYYRTNRY 66
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: A0A858R7D3_9PROT (Formate dehydrogenase n=1 Tax=Rhodospirillaceae bacterium B3 TaxID=2728875 RepID=A0A858R7D3_9PROT) HSP 1 Score: 63.5 bits (153), Expect = 6.750e-12 Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 31 RRGFLRSIGGASVAGAAVAVG--AAPPAEAAESDADKKKTRYQESDHVKAYYRTNRY 195
RRGFLR +G + AGAAVAV AA PAEA ES+AD+ K RY+E+DHVK YYRTNRY
Sbjct: 15 RRGFLRVLG-TTAAGAAVAVPLVAAGPAEAKESEADRVKARYKETDHVKTYYRTNRY 70
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: A0A833L7A3_9HYPH (Uncharacterized protein n=1 Tax=Beijerinckiaceae bacterium TaxID=1978229 RepID=A0A833L7A3_9HYPH) HSP 1 Score: 61.2 bits (147), Expect = 5.530e-11 Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 16 RSSVD--RRGFLRS-IGGASVAGAAVAVGAAPPAEAAESDADKKKTRYQESDHVKAYYRTNRY 195
R+ VD RR FLR+ + GASVA AA A P +AAESDADKKK RY+E+DHVK YY TNRY
Sbjct: 9 RTGVDASRRTFLRAGLAGASVAAAATGA-AVTPVQAAESDADKKKARYKETDHVKKYYATNRY 70
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: A0A3Q8XQU2_9HYPH (Uncharacterized protein n=2 Tax=Georhizobium profundi TaxID=2341112 RepID=A0A3Q8XQU2_9HYPH) HSP 1 Score: 60.8 bits (146), Expect = 7.470e-11 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 1 TSKSNRSSVDRRGFLRSIGGASVAGAAVAVGAAPPAEAA--ESDADKKKTRYQESDHVKAYYRTNRY 195
T + ++ + RRGFL + G A AAVAVG EAA E+D +K+K RYQE+DHVKA+YRTNRY
Sbjct: 2 TIQDDQKGLGRRGFLGAFAGVGAAAAAVAVGTGGVQEAAAQEADDEKRKARYQETDHVKAFYRTNRY 68
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: UPI00166DD52E (twin-arginine translocation signal domain-containing protein n=2 Tax=Salinarimonas TaxID=690086 RepID=UPI00166DD52E) HSP 1 Score: 58.5 bits (140), Expect = 6.740e-10 Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 7 KSNRSSVDRRGFLRSIGGASVAGAAVAVG--AAPPAEAAESDADKKKTRYQESDHVKAYYRTNRY 195
+S + ++DRRGFLR++GGA AAVAV A A+A+E+ +K K RYQE+ HV+A+YRTNRY
Sbjct: 8 ESAKVALDRRGFLRAVGGAGSLAAAVAVSPLAGSEAQASETADEKVKARYQETAHVQAFYRTNRY 72
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: UPI000DF1B338 (twin-arginine translocation signal domain-containing protein n=1 Tax=Oleisolibacter albus TaxID=2171757 RepID=UPI000DF1B338) HSP 1 Score: 58.2 bits (139), Expect = 1.000e-9 Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 19 SSVDRRGFLRSIGGASVAGAAVAVG--AAPPAEAAESDADKKKTRYQESDHVKAYYRTNRY 195
S ++RR FLR++G ++ AGAAVA AA PA+A E+ A++ K RY+E++HVKAYYRTNRY
Sbjct: 15 SGLERRDFLRALG-STAAGAAVAAPLLAAGPAQAKETGAERTKARYRETEHVKAYYRTNRY 74
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: A0A508TBC6_9BRAD (UCR_Fe-S_N domain-containing protein n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A508TBC6_9BRAD) HSP 1 Score: 57.8 bits (138), Expect = 1.260e-9 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 16 RSSVDRRGFLRSIGGASV-AGAAVAVGAAPPAEA-AESDADKKKTRYQESDHVKAYYRTNRY 195
+++V RR FLR++G +V AGA +A PA+A +E+DA+K+K RY+E+DHVKAYYR NRY
Sbjct: 6 KTTVGRRDFLRTVGVGTVGAGATLATPLITPAQADSENDAEKRKARYKETDHVKAYYRVNRY 67
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: A0A849IAB1_9HYPH (Formate dehydrogenase n=1 Tax=Enterovirga sp. DB1703 TaxID=2730920 RepID=A0A849IAB1_9HYPH) HSP 1 Score: 57.8 bits (138), Expect = 1.360e-9 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 4 SKSNRSSVDRRGFLRSIGGASVAGAAVAVG--AAPPAEAAESDADKKKTRYQESDHVKAYYRTNRY 195
S+S+R +VDRR FL ++GGAS A VAV AA A+A + ++ K RY+ESDHVKA+YRTN Y
Sbjct: 2 SESDRKAVDRRKFLGAVGGASSAAVVVAVSPIAATEAQAYDPGPNETKARYRESDHVKAFYRTNGY 67
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: A0A1M5Q7W4_9BRAD (Formate dehydrogenase region TAT target n=1 Tax=Bradyrhizobium erythrophlei TaxID=1437360 RepID=A0A1M5Q7W4_9BRAD) HSP 1 Score: 57.4 bits (137), Expect = 1.790e-9 Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 16 RSSVDRRGFLRSIG-GASVAGAAVAVGAAPPAEA-AESDADKKKTRYQESDHVKAYYRTNRY 195
+++VDRR FLR +G GA AGA +A PA A +E+D +K+K RY+E+DHVKAYYR NRY
Sbjct: 6 KATVDRRDFLRKVGVGAVGAGATLASPLIAPARADSENDDEKRKVRYKETDHVKAYYRVNRY 67
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Match: A0A1W9K829_9PROT (Uncharacterized protein n=2 Tax=unclassified Proteobacteria TaxID=81684 RepID=A0A1W9K829_9PROT) HSP 1 Score: 56.6 bits (135), Expect = 3.280e-9 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 28 DRRGFLRSIGGASVAGAAVAVGAAPPAEA--AESDADKKKTRYQESDHVKAYYRTNRY 195
DRR FL+++ AGA+ G A P EA AES +DK+K RY+E+DHVKA+YRTNRY
Sbjct: 9 DRRSFLKALS-VGAAGASAVAGLATPVEAVAAESASDKRKKRYRETDHVKAFYRTNRY 65 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54151.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54151.1.1 >prot_P-wetherbeei_contig54151.1.1 ID=prot_P-wetherbeei_contig54151.1.1|Name=mRNA_P-wetherbeei_contig54151.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp TSKSNRSSVDRRGFLRSIGGASVAGAAVAVGAAPPAEAAESDADKKKTRYback to top mRNA from alignment at P-wetherbeei_contig54151:283..480- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54151.1.1 ID=mRNA_P-wetherbeei_contig54151.1.1|Name=mRNA_P-wetherbeei_contig54151.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig54151:283..480- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54151:283..480- >mRNA_P-wetherbeei_contig54151.1.1 ID=mRNA_P-wetherbeei_contig54151.1.1|Name=mRNA_P-wetherbeei_contig54151.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig54151:283..480- (Phaeothamnion wetherbeei SAG_119_79)back to top |