mRNA_P-wetherbeei_contig5407.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: D7G9C4_ECTSI (MIP family channel protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9C4_ECTSI) HSP 1 Score: 119 bits (299), Expect = 1.120e-29 Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 1
Query: 1 FGMAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVYFAHFSVVPKRPEPPQWHDTYA-KAVQEPTATRNAYIS 288
FGMAFF AI MFGHISA VNPAML+AKA +G + W+ A L++A+ +G ++G VYG+YFAHFS+VP+RP PP+W D + + PT TRNAYIS
Sbjct: 34 FGMAFFLAISMFGHISANVNPAMLVAKAFLGRLAWKDALALSVANILGGFLGGVVVYGLYFAHFSIVPERPSPPRWDDAFVDSSYAPPTHTRNAYIS 130
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: A0A0L0FAG2_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FAG2_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 6.810e-17 Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 1 FGMAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVYFAHFSVVPKRPEPPQWHDTYAKAVQEPTATRNAYIS 288
FG+AF+ A+ FG +SAT+NP + AK + G + VL++A+FIGA+IGAF V+ Y HFS++P+ P+ +D + PT+ R AYIS
Sbjct: 1 FGLAFYVAVASFGSVSATLNPCTMFAKWICGKVTTEEWIVLSVAEFIGAFIGAFLVWLTYLGHFSLIPEVPD----NDEMKQIKLAPTSVREAYIS 92
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: A0A059LR00_9CHLO (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LR00_9CHLO) HSP 1 Score: 57.8 bits (138), Expect = 1.160e-7 Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 1 FGMAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVYFAHFSVVPKRP 213
FG F + +MFGHISA +NPA+ LA ++G + L+ ++ +GA++GA Y Y+ HF +VP+ P
Sbjct: 30 FGFPFGVSTIMFGHISAVLNPAVCLAGLVLGKYSFAEFVALSASELLGAFLGALSTYAHYYPHFCLVPQAP 100
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: A0A1J0F964_9PHYC (Aquaglyceroporin n=1 Tax=Only Syngen Nebraska virus 5 TaxID=1917232 RepID=A0A1J0F964_9PHYC) HSP 1 Score: 57.4 bits (137), Expect = 1.220e-7 Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 1 FGMAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVYFAHFSVVPK 207
FGMAF I+MFG +SA +NPAM LA ++ M ++ V +F+G ++GA + YF HF + PK
Sbjct: 48 FGMAFAIPIIMFGFVSAHLNPAMSLALFILDKMDYKEFLVCVAGEFLGMFVGAVLTFVHYFPHFRLFPK 116
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: A0A087SQB7_AUXPR (Putative glycerol uptake facilitator protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SQB7_AUXPR) HSP 1 Score: 57.0 bits (136), Expect = 2.240e-7 Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 1 FGMAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVYFAHFSVVPKRP 213
FG+AF +MFGHISA +NPA L + + GN+ L+ ++ GA++GA ++ +Y HF+VVP+ P
Sbjct: 58 FGLAFGFPTMMFGHISAFLNPAACLFQWVAGNLSVTEFLALSFSELAGAFLGAILLWLIYLPHFNVVPEPP 128
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: A0A3M7KNP2_AUXPR (Glycerol kinase (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KNP2_AUXPR) HSP 1 Score: 57.0 bits (136), Expect = 2.430e-7 Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 1 FGMAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVYFAHFSVVPKRP 213
FG+AF +MFGHISA +NPA L + + GN+ L+ ++ GA++GA ++ +Y HF+VVP+ P
Sbjct: 2251 FGLAFGFPTMMFGHISAFLNPAACLFQWVAGNLSVTEFLALSFSELAGAFLGAILLWLIYLPHFNVVPEPP 2321
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: M1GXH3_9PHYC (Glycerol uptake facilitator protein n=1 Tax=Acanthocystis turfacea Chlorella virus Canal-1 TaxID=1278270 RepID=M1GXH3_9PHYC) HSP 1 Score: 54.7 bits (130), Expect = 1.380e-6 Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 FGMAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVYFAHFSVVP 204
FGMAF +V+FG +SA +NPAM +A L+G + + AFV + IG ++GA VY ++ HF++ P
Sbjct: 123 FGMAFAIPLVIFGFVSAHLNPAMCIALLLLGKVDAKEAFVSIGGEIIGMFLGAVMVYLLFLPHFNLRP 190
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: E1ZN74_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZN74_CHLVA) HSP 1 Score: 52.8 bits (125), Expect = 5.660e-6 Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 1 FGMAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVYFAHFSVVPK 207
FG++F I+MFG+ISA +NPA LA + G + + L+ A+F GA++GA V+ Y HF VP+
Sbjct: 57 FGLSFGVVIMMFGYISAHLNPATCLALWVAGKISFTHFLALSGAEFAGAFVGACLVFLHYLPHFKTVPE 125
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: M1H9L8_9PHYC (Glycerol uptake facilitator protein n=1 Tax=Acanthocystis turfacea Chlorella virus MN0810.1 TaxID=1278272 RepID=M1H9L8_9PHYC) HSP 1 Score: 52.0 bits (123), Expect = 1.080e-5 Identity = 26/68 (38.24%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 1 FGMAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVYFAHFSVVP 204
FGMAF I++FG +SA +NPAM +A ++G + + A V + +G ++GA VY ++ HF++ P
Sbjct: 49 FGMAFAMPIIIFGFVSAHLNPAMCVALLVLGKVDAKEALVSIGGELLGMFLGAIMVYLLFLPHFNIRP 116
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Match: A0A504YYS1_FASGI (Aquaporin-9 n=1 Tax=Fasciola gigantica TaxID=46835 RepID=A0A504YYS1_FASGI) HSP 1 Score: 49.3 bits (116), Expect = 4.860e-5 Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 1
Query: 55 VNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGAFFVYGVY 180
+NPAM LA ALVG +PW + + + GAYIGA VYG+Y
Sbjct: 94 INPAMALAMALVGKVPWIAIVPIMLCEVFGAYIGALVVYGIY 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5407.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5407.1.1 >prot_P-wetherbeei_contig5407.1.1 ID=prot_P-wetherbeei_contig5407.1.1|Name=mRNA_P-wetherbeei_contig5407.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp MAFFSAIVMFGHISATVNPAMLLAKALVGNMPWRTAFVLTIADFIGAYIGback to top mRNA from alignment at P-wetherbeei_contig5407:1426..2088+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5407.1.1 ID=mRNA_P-wetherbeei_contig5407.1.1|Name=mRNA_P-wetherbeei_contig5407.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig5407:1426..2088+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5407:1426..2088+ >mRNA_P-wetherbeei_contig5407.1.1 ID=mRNA_P-wetherbeei_contig5407.1.1|Name=mRNA_P-wetherbeei_contig5407.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=282bp|location=Sequence derived from alignment at P-wetherbeei_contig5407:1426..2088+ (Phaeothamnion wetherbeei SAG_119_79)back to top |