mRNA_P-wetherbeei_contig540.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A0A7S4D8V7_HETAK (Triosephosphate isomerase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8V7_HETAK) HSP 1 Score: 287 bits (734), Expect = 8.780e-86 Identity = 163/270 (60.37%), Postives = 195/270 (72.22%), Query Frame = 3
Query: 1230 RFSAPAMPRLPLIAGNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRALWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKFARIVAF 2039
R M R P++AGNWK+NP T EEA ALAA VAA + + +DA EVVLF PF+ PV + + S VK+GAQN Y GAFTGS S MV+S G EYVL GHSERR L+R+ + A+ K++ L+AG+K ILC+GE ++EFE GLV+QVC LQL+K L GV+A+ + V IAYEPVWAIGTGLTATP IAQ VH FIRGW++ +YG AVAD VRIQYGGSVTPETVDELMA PD+DG LVGGASLDA KF RI+ F
Sbjct: 79 RLDLSLMARQPIMAGNWKMNPCTLEEAAALAAGVAA--------NPIENDA---EVVLFPSHPFLVPVMEKIDG--SQVKLGAQNCYTEDKGAFTGSVSTCMVKSIGVEYVLAGHSERRTLFRDDDGAINRKVKKVLSAGMKPILCIGELKDEFEEGLVEQVCALQLAKDLRGVTAEEM-RRVVIAYEPVWAIGTGLTATPEIAQKVHAFIRGWIAGKYGKAVADEVRIQYGGSVTPETVDELMAQPDIDGALVGGASLDAEKFGRIMNF 334
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A0A7S2XYZ2_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYZ2_9STRA) HSP 1 Score: 278 bits (712), Expect = 2.800e-83 Identity = 158/292 (54.11%), Postives = 202/292 (69.18%), Query Frame = 3
Query: 1170 ATVYTVASFIERRFAPSRPLRFSAPAM--PRLPLIAGNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRALWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKFARIVAF 2039
A + TV++F + + +R S R+P I GNWK+NP T EEA ALA GV SG D S EV +F P PF+YPV K L S VK G + + GA+TG+ S +M+++ G EYVL GHSERR L++ + A+ K+R L +G+K +LC+GE+REE+E L K++C +QL+K LAGVSA+ + + V+IAYEPVWAIGTGLTATP IAQ+VH +IR W++ +YG VAD VRIQYGGSVTPETVDELMACPD+DG LVGGASLDAAKF+RIV F
Sbjct: 13 AVISTVSAFFGSPLSYTSAMRSSTQLSMADRVPFICGNWKMNPTTLEEAKALAE-------GVKSGC----DGSAAEVAIFTPHPFLYPVGKILDG--STVKYGGETVFFEDKGAYTGAVSASMLKTVGCEYVLAGHSERRVLFKTDDSAISRKVRKILDSGMKPVLCIGESREEYEANLNKEICCIQLAKDLAGVSAEEM-KLVTIAYEPVWAIGTGLTATPEIAQNVHAYIRSWVAGKYGQEVADEVRIQYGGSVTPETVDELMACPDIDGALVGGASLDAAKFSRIVNF 290
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A0A835ZJI0_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI0_9STRA) HSP 1 Score: 260 bits (664), Expect = 7.180e-77 Identity = 149/264 (56.44%), Postives = 182/264 (68.94%), Query Frame = 3
Query: 1248 MPRLPLIAGNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRALWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKFARIVAF 2039
M R P+I GNWK+NP A LAA VAA G+ GV EV + P PFV PVR AL S + VGAQNA+ GAFTG+ S M+ S G EYVL GHSERR +++E + K+ L+ ++ ILC+GE++EE+E GL K+VC +QL K LAGV+A+ + + V IAYEPVWAIGTGL ATP +AQSVH +IR WL+ +YG AVAD VRIQYGGSVTPE+VD+LMACPD+DG LVGGASL A KFARI F
Sbjct: 2 MARTPIITGNWKMNPGDMASAVQLAADVAAQTKGL---EGV-------EVGIIPPYPFVPPVRDALKG--SGITVGAQNAFVEDKGAFTGAVSTTMLLSVGCEYVLCGHSERRTIFKEDNALINSKVLKVLSKNMRPILCIGESKEEYESGLNKEVCAVQLGKNLAGVTAEQM-KDVVIAYEPVWAIGTGLVATPEVAQSVHAYIRSWLAGKYGQAVADDVRIQYGGSVTPESVDDLMACPDIDGALVGGASLVADKFARICRF 252
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A0A4D9CPZ8_9STRA (Triosephosphate isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPZ8_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.250e-74 Identity = 146/262 (55.73%), Postives = 182/262 (69.47%), Query Frame = 3
Query: 1254 RLPLIAGNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRALWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKFARIVAF 2039
R P IAGNWK NP T E A LA V+ A + AS +V + P PF+ PV++ L S V +GAQ+ Y GA+TG+ S M++S GA++VL GHSERRAL+ + ++ V KL+ LAAGLKAILC+GE ++E+E+G+ K +C LQL+K L GV+ + + E+V+IAYEPVWAIGTGLTATP IAQ VH IR L YG AVAD+V IQYGGSVTPETVDELMA PD+DG LVGGASL KFARI+ F
Sbjct: 53 RRPFIAGNWKENPDTLEAAIDLAKVVSTA----------SSSASNVDVAVVVPFPFLVPVKETLKG--SNVLIGAQDLYTEDKGAYTGATSLPMIKSVGAQWVLCGHSERRALFGDTDETVNAKLKKVLAAGLKAILCIGETKDEYELGVNKLICGLQLAKGLKGVTKEQM-ENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPETVDELMAMPDIDGALVGGASLVGEKFARIINF 301
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A0A7S2UU88_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU88_9STRA) HSP 1 Score: 252 bits (644), Expect = 3.890e-74 Identity = 140/253 (55.34%), Postives = 180/253 (71.15%), Query Frame = 3
Query: 1272 GNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRALWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKFARI 2030
GNWK+NP T +EA ALA V V D ++ EV++ P PF+ PV + S V++G QNA+ GA+TG+ S M++S GA+YVL GHSERR L+R+ + ++ K+R L AGLK ILC+GE +EE++ GLV+ VC LQ+SK LA V+A+ + + V IAYEPVWAIGTGLTATP IAQSVH +IR +++++G VA+ VRIQYGGSVTPETVDELMACPD+DG LVGGASL A KF RI
Sbjct: 1 GNWKMNPETLDEAVALAKGVVEQV----------KDGASGEVIVIPPSPFLVPVADIIKG--SGVQLGGQNAFFEDKGAYTGAVSTCMLKSVGAKYVLAGHSERRTLFRDDDSSINRKVRKILEAGLKPILCIGETKEEYDQGLVELVCGLQISKDLADVTAEQMKDIV-IAYEPVWAIGTGLTATPEIAQSVHKYIRSCIAKKFGDEVAEGVRIQYGGSVTPETVDELMACPDIDGALVGGASLVADKFGRI 240
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A0A835YXR2_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR2_9STRA) HSP 1 Score: 249 bits (636), Expect = 2.260e-72 Identity = 141/260 (54.23%), Postives = 177/260 (68.08%), Query Frame = 3
Query: 1254 RLPLIAGNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRALWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKFARIV 2033
R PLIAGNWK NP T +EA ALA+ VA A A VV+ P PF+ PV+ A A A+ +G QN Y GA+TG+ S AM+ S G YVL GHSERR ++R ++A+ KLRA L + ILC+GE++EE++ GL K VC +QLSK L GV+ + + + + +AYEPVWAIGTGLTATP IAQSVH +IRG+L++ Y VAD V IQYGGSVTP++VD LMA PD+DG LVGGASLD AKF RI+
Sbjct: 39 RKPLIAGNWKENPCTVQEAEALASEVAEA----------TKQAGDVGVVVIPPYPFLVPVQNA---ASGALMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEM-KRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRII 284
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A0A6S9FXW6_HETAK (Triosephosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FXW6_HETAK) HSP 1 Score: 246 bits (629), Expect = 3.110e-71 Identity = 136/262 (51.91%), Postives = 180/262 (68.70%), Query Frame = 3
Query: 1254 RLPLIAGNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRALWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKFARIVAF 2039
R P IAGNWK+NP + EEA LAA VA + + + E+ +FAP PF+YPV K L S V VGA+ + GA+TG+ S MV+S G ++VL GHSERR L+ +D+V ++ L G+ ILC+GE++ E++ GL +++C +QL+K L V+ + + ++V IAYEPVWAIGTGLTATP IAQ+VH IR W+++++G +A RIQYGGSVTPETVDELMACPD+DG LVGGASLDA KFARI F
Sbjct: 45 RRPFIAGNWKMNPTSLEEAKTLAAKVAE----------LTKENTEVEMAVFAPHPFIYPVAKELEG--SNVVVGAETIFTEDKGAYTGAVSATMVKSMGGKWVLAGHSERRVLFNTDDDSVNRQVLKILNRGMGCILCIGESQAEYDAGLNQEICTVQLAKDLKDVTPEQM-KNVVIAYEPVWAIGTGLTATPEIAQNVHASIRAWVAKKFGEQIAKETRIQYGGSVTPETVDELMACPDIDGALVGGASLDAEKFARICNF 293
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A4S697_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S697_OSTLU) HSP 1 Score: 244 bits (622), Expect = 5.530e-71 Identity = 141/252 (55.95%), Postives = 169/252 (67.06%), Query Frame = 3
Query: 1266 IAGNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRALWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKF 2021
+AGNWKLNP T +EA LAA V AA G+ + S EV + P PF V + L S V VGAQN Y SGAFTG S M +S G +VL+GHSERR L+ E ++ K R L G+ A+LC+GE +EE+E G K+VC QLS AL+GV AD +++ V IAYEPVWAIGTGLTATPAIAQSVH IR W YG +VA +++IQYGGSV PETVDELM PDVDGCLVGGASL+A +F
Sbjct: 1 MAGNWKLNPKTLDEARTLAALVGAAA----RDGGIGTNKSKTEVFVCPPAPFAAEVARTLEG--SGVAVGAQNIYFEASGAFTGEMSAEMAKSVGCTHVLIGHSERRELFGETDEMTRLKTRKTLDCGMTAVLCIGETKEEYERGEAKKVCNRQLSAALSGVEADEMSK-VIIAYEPVWAIGTGLTATPAIAQSVHAGIRQWFRTNYGESVAAKIQIQYGGSVKPETVDELMQAPDVDGCLVGGASLNAEQF 245
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A0A7S0QPR2_9CRYP (Triosephosphate isomerase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPR2_9CRYP) HSP 1 Score: 246 bits (627), Expect = 8.720e-71 Identity = 135/274 (49.27%), Postives = 183/274 (66.79%), Query Frame = 3
Query: 1227 LRFSAPAMPRLPLIAGNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRALWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKFARIVAFVPE 2048
+RF R+P IAGNWK+NP T E+A LA VA G+ +V +F P PF+ VR L A ++VGAQ+ + GA+TG+ S +M++S G ++VLVGHSERR++++ ++ + G + AL GL ILC+GE +EE+E L KQ+C + LSK L GV+ + + + V++AYEPVWAIGTGL P AQ VH F+R WL+ Y + A VRIQYGGSVTPE+VD+LMA PD+DGCLVGGASLD AKFARI+A++P+
Sbjct: 52 VRFELAMSGRVPFIAGNWKMNPETVEQALDLAKTVA----------GLKAKTQA-QVAVFVPHPFIAAVRPILEGA--GIEVGAQSCFAEQRGAYTGATSTSMIKSVGGKHVLVGHSERRSVFKYTDEMINGMVHKALKDGLCPILCIGETKEEYESKLNKQICAVHLSKGLKGVTKEQM-KRVTVAYEPVWAIGTGLVCDPETAQDVHAFVRSWLTSMYDAETAAGVRIQYGGSVTPESVDDLMAKPDIDGCLVGGASLDPAKFARIIAYIPK 311
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Match: A0A7S0QWG0_9CRYP (Triosephosphate isomerase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QWG0_9CRYP) HSP 1 Score: 244 bits (624), Expect = 2.000e-70 Identity = 141/258 (54.65%), Postives = 177/258 (68.60%), Query Frame = 3
Query: 1266 IAGNWKLNPATAEEATALAAAVAAAVGGVSSGSGVNDDASTPEVVLFAPLPFVYPVRKALAAARSAVKVGAQNAYGATSGAFTGSASHAMVRSAGAEYVLVGHSERRA--LWREAEDAVGGKLRAALAAGLKAILCVGENREEFEVGLVKQVCELQLSKALAGVSADSVAESVSIAYEPVWAIGTGLTATPAIAQSVHLFIRGWLSRRYGSAVADRVRIQYGGSVTPETVDELMACPDVDGCLVGGASLDAAKFARIV 2033
IAGNWKLNP T +EA ALA+AV V S S + D ++ + P PF+ PV + + + V +GA++ + GAFTG S M++S G +YVLVGHSERR + E++ + K R L AGL ILCVGE +EE+++ L K +C LQLSK LAGV+ + +A V+IAYEPVWAIGTGLTATP IAQ VH +IR WL++ Y A AD VRIQYGGSVTP+TVD LMACPD+DG LVGGASL A KF RI+
Sbjct: 58 IAGNWKLNPTTLDEAKALASAV------VKSASSITKDM---DICVCCPHPFLAPVAEIVKGTK--VSLGAEDLFTEDKGAFTGGVSVGMLKSVGVKYVLVGHSERRQGNIATESDAVINKKTRKVLDAGLSPILCVGETKEEYQLNLNKAICALQLSKGLAGVTKEEMAR-VTIAYEPVWAIGTGLTATPEIAQEVHAYIRSWLAQMYDKATADTVRIQYGGSVTPDTVDSLMACPDIDGALVGGASLLADKFERII 303 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig540.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig540.2.2 >prot_P-wetherbeei_contig540.2.2 ID=prot_P-wetherbeei_contig540.2.2|Name=mRNA_P-wetherbeei_contig540.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=697bp MRPHCLGIVVLTALRSSAFAPAGWKLASNILSRIRTTPIRSRKRSFAGRLback to top mRNA from alignment at P-wetherbeei_contig540:1467..6135- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig540.2.2 ID=mRNA_P-wetherbeei_contig540.2.2|Name=mRNA_P-wetherbeei_contig540.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4669bp|location=Sequence derived from alignment at P-wetherbeei_contig540:1467..6135- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig540:1467..6135- >mRNA_P-wetherbeei_contig540.2.2 ID=mRNA_P-wetherbeei_contig540.2.2|Name=mRNA_P-wetherbeei_contig540.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2091bp|location=Sequence derived from alignment at P-wetherbeei_contig540:1467..6135- (Phaeothamnion wetherbeei SAG_119_79)back to top |