mRNA_P-wetherbeei_contig53583.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A5C8PPM9_9HYPH (PDZ domain-containing protein n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PPM9_9HYPH) HSP 1 Score: 254 bits (648), Expect = 3.290e-79 Identity = 125/174 (71.84%), Postives = 148/174 (85.06%), Query Frame = 1
Query: 1 SLSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSGALLENVPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVCTARFGGPDTLSGELDARAQVVRATLAEWHATRRRPPGQI 522
+++G+ILDMR NPGGLLD++I A LLLD+G +LTT+GRHPDSR TFRSGSGAL+ VPMVA+MNGRSASAAEI+ AALQDRGRA++VGS SYGKGTVQTVV LPN+GELTLTWSRM APSGYAW E+GVLPTVC+A+F TL+GEL+ RAQ VR T+AEWH R P ++
Sbjct: 314 AMAGVILDMRDNPGGLLDRSITTAGLLLDSGTVLTTEGRHPDSRMTFRSGSGALMPRVPMVAVMNGRSASAAEILAAALQDRGRAVVVGSTSYGKGTVQTVVPLPNDGELTLTWSRMLAPSGYAWAEIGVLPTVCSAKFSHSGTLAGELEHRAQEVRRTMAEWHMVRDPTPERV 487
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A5C5TAJ3_9HYPH (PDZ domain-containing protein n=2 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TAJ3_9HYPH) HSP 1 Score: 250 bits (639), Expect = 7.780e-78 Identity = 125/173 (72.25%), Postives = 143/173 (82.66%), Query Frame = 1
Query: 4 LSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSGALLENVPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVCTARFGGPDTLSGELDARAQVVRATLAEWHATRRRPPGQI 522
++GIILDMR NPGGLLD++I A LLLD+G +LTT+GRHPDSR TFRS ALL VPMVA+MNGRSASAAEIV AALQDRGRA++VGS SYGKGTVQTVV +PN+GELTLTWSRM APSGYAW E+GVLPTVCTA+F TL GEL+ RAQ VR T+AEWH R P ++
Sbjct: 319 MAGIILDMRDNPGGLLDRSITTASLLLDSGTVLTTEGRHPDSRMTFRSSGTALLARVPMVALMNGRSASAAEIVAAALQDRGRAVVVGSTSYGKGTVQTVVPMPNDGELTLTWSRMLAPSGYAWAEIGVLPTVCTAKFSDSGTLPGELEQRAQEVRRTMAEWHTVRDPTPERV 491
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A521M5A8_9HYPH (PDZ domain-containing protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M5A8_9HYPH) HSP 1 Score: 203 bits (516), Expect = 8.890e-60 Identity = 101/168 (60.12%), Postives = 131/168 (77.98%), Query Frame = 1
Query: 4 LSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSGALLENVPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVCTARFG--GPDTLSGELDARAQVVRATLAEWHATR 501
L+G+I+DMRGN GGLLDQA VAE+ + +G + +T GRHPDSR+T++S + + ++P+V +MNG SASAAEIV AALQDRGRA++VG+ SYGKGTVQTVVRLPNEGEL LTWSR+ APSGY W+ELGVLP++CTA+ G G + +D+ +A+L WHA R
Sbjct: 315 LAGLIIDMRGNRGGLLDQAQAVAEVFIGDGTIFSTQGRHPDSRRTYKSAAARKIADLPVVVLMNGGSASAAEIVAAALQDRGRAVVVGTTSYGKGTVQTVVRLPNEGELILTWSRLQAPSGYTWNELGVLPSICTAKAGAAGQAATTSAVDSN----QASLMRWHALR 478
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A1H8Y908_9PROT (Carboxyl-terminal processing protease n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8Y908_9PROT) HSP 1 Score: 201 bits (510), Expect = 7.710e-59 Identity = 101/167 (60.48%), Postives = 129/167 (77.25%), Query Frame = 1
Query: 4 LSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSGALLENVPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVCTARFGGPDTLS-GELDARAQVVRATLAEWHATR 501
++G+I+DMR N GGLLDQA V+EL ++NG + +T GRHPDSR+T++S + ++P+V +MNG SASAAEIV AALQDRGRA++VGS SYGKGTVQTVVRL NEGEL LTWSR++APSGY W+ELGVLP VCT++ G L+ G +D+ + TL WHA R
Sbjct: 315 MAGVIIDMRSNRGGLLDQAQTVSELFINNGTIFSTSGRHPDSRRTYKSVTSGKTADMPIVVLMNGGSASAAEIVAAALQDRGRAVVVGSTSYGKGTVQTVVRLANEGELILTWSRLNAPSGYTWNELGVLPNVCTSKIGDVGQLNAGSVDSS----QGTLMRWHALR 477
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A1T4KMC4_9HYPH (Carboxyl-terminal processing protease n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4KMC4_9HYPH) HSP 1 Score: 200 bits (508), Expect = 1.270e-58 Identity = 101/173 (58.38%), Postives = 127/173 (73.41%), Query Frame = 1
Query: 4 LSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSGALLENVPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVCTARFGGPDTLSGELDARAQVVRATLAEWHATRRRPPGQI 522
L GII+DMRGN GGLLDQA VAEL + +G++ +T GRHPD+ +T+RS S ++P+V ++NG SASAAEIV AALQDRGRA++VG+ SYGKGTVQTVVRLPN+GEL LTWSR+ APSGY W+ELGV+P +CTA+ D L L R+ L WHA R P ++
Sbjct: 310 LGGIIIDMRGNRGGLLDQAESVAELFIGDGVIFSTKGRHPDADRTYRSDSHDRASDLPIVVLVNGNSASAAEIVAAALQDRGRAVVVGTTSYGKGTVQTVVRLPNQGELILTWSRLIAPSGYTWNELGVMPNICTAKVPDVDKLGASL---VDGSRSLLQHWHAERHPGPQEV 479
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A537N273_9PROT (PDZ domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N273_9PROT) HSP 1 Score: 196 bits (498), Expect = 2.340e-57 Identity = 101/166 (60.84%), Postives = 123/166 (74.10%), Query Frame = 1
Query: 4 LSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSGALLENVPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVCTARFGGPDTLSGELDARAQVVRATLAEWHATR 501
L GIILDMR N GGLLDQA VAE+ + +G++ +T GRHPDS++T+RSGS E P+V ++NG SASAAEIV AALQDRGRA +VG+ SYGKGTVQTV+RLPNEGEL LTWSR+ APSGY W+E GV+P +CTA+ G L+ A +A L WHA R
Sbjct: 297 LQGIILDMRSNRGGLLDQAQSVAEVFIGDGVIFSTQGRHPDSQRTYRSGSRRTAE-APLVVLVNGNSASAAEIVAAALQDRGRAAIVGTTSYGKGTVQTVIRLPNEGELILTWSRLLAPSGYTWNEQGVMPNICTAKVGDVAQLA---PASVDANKALLQRWHAER 458
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A1G7VBL0_9PROT (Carboxyl-terminal processing protease n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7VBL0_9PROT) HSP 1 Score: 197 bits (500), Expect = 2.840e-57 Identity = 99/173 (57.23%), Postives = 126/173 (72.83%), Query Frame = 1
Query: 4 LSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSGALLENVPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVCTARFGGPDTLSGE-------LDARAQVVRATLAEWHATR 501
+ G++LDMRGNPGGLLDQA+ V++L L G ++ T GRHP+SRQ++ +G G L ++PM +++GRSASAAEIV AALQD GRA+++G+ SYGKGTVQTV+RLPN+GE+TLTWSR H+PSGYA LGVLPT+CT+R G E L VV LA W ATR
Sbjct: 319 VQGLVLDMRGNPGGLLDQAVAVSDLFLRRGRIVFTRGRHPESRQSYDAGGGDLAHDLPMAVVIDGRSASAAEIVAAALQDAGRAVVIGTTSYGKGTVQTVIRLPNDGEMTLTWSRFHSPSGYALEGLGVLPTLCTSRPDGRAVSEAESAGLLAPLRQGDPVVATRLARWRATR 491
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A0F2RXI8_9PROT (PDZ domain-containing protein n=1 Tax=Rhodospirillaceae bacterium BRH_c57 TaxID=1629718 RepID=A0A0F2RXI8_9PROT) HSP 1 Score: 196 bits (497), Expect = 3.800e-57 Identity = 91/166 (54.82%), Postives = 128/166 (77.11%), Query Frame = 1
Query: 4 LSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSGALLENVPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVC-TARFGGPDTLSGELDARAQVVRATLAEWHAT 498
+ G++LD+RGNPGGLLDQA+ V+++ + G ++TT GRHP++ Q++ + +G ++ +PMV +++GRSASAAEIV AALQD GRA+++GSASYGKGTVQTV+R+PN+GE+TLTWSR H+PSGYA H LGVLPTVC T D+L + + + LA+W +T
Sbjct: 286 MRGVLLDLRGNPGGLLDQAVGVSDMFVTQGRIVTTRGRHPEAMQSYSARTGDVINGLPMVVMLDGRSASAAEIVAAALQDSGRAVVIGSASYGKGTVQTVIRMPNDGEMTLTWSRFHSPSGYALHGLGVLPTVCVTEASASADSLLANVALSSNPIATQLAQWRST 451
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A1Q3KEH7_9PROT (PDZ domain-containing protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q3KEH7_9PROT) HSP 1 Score: 194 bits (493), Expect = 8.100e-57 Identity = 100/167 (59.88%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 4 LSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSGALLEN-VPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVCTARFGGPDTLSGELDARAQVVRATLAEWHATR 501
LSG+I+DMR N GGLLDQA V+E+ + +G + +T GRHPDSR+T++S +G N +P+V +MNG SASAAEIV AALQDRGRA++VG+ SYGKGTVQTVVRL NEGEL LTWSR+ APSGY W+ELGVLP +CTA+ G L A + L WHA R
Sbjct: 264 LSGLIIDMRSNRGGLLDQAQTVSEVFVGDGTIFSTLGRHPDSRRTYKSSTGRSKANDLPIVVLMNGGSASAAEIVAAALQDRGRAVVVGTTSYGKGTVQTVVRLANEGELILTWSRLQAPSGYTWNELGVLPNICTAKVGDAGKLGA---ASMETSHGQLMRWHALR 427
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Match: A0A6N6ZQF9_9PROT (Carboxyl-terminal processing protease n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6N6ZQF9_9PROT) HSP 1 Score: 194 bits (494), Expect = 1.310e-56 Identity = 99/174 (56.90%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 4 LSGIILDMRGNPGGLLDQAI*VAELLLDNGLLLTTDGRHPDSRQTFRSGSG-ALLENVPMVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGELTLTWSRMHAPSGYAWHELGVLPTVCTARFGGPDTLSGELDARAQVVRATLAEWHATRRRPPGQI 522
L GII+DMR N GGLLDQA V+E+ + +G++ +T+GRHPDS++T+RS +G A +P+V +MNG SASAAEIV AALQDRGRA+++G+ SYGKGTVQTVVRL NEGEL LTWSR+ APSGY W+ELGVLP +CT++ G + L A +L WHA R P ++
Sbjct: 304 LVGIIIDMRSNRGGLLDQAQSVSEVFIADGMIFSTNGRHPDSKRTYRSSNGRATTGQLPIVVLMNGGSASAAEIVAAALQDRGRAVVIGTTSYGKGTVQTVVRLANEGELILTWSRLQAPSGYTWNELGVLPNICTSKVGDANKLGV---ASVDSNHNSLMRWHALRNPTPQEV 474 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53583.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53583.1.1 >prot_P-wetherbeei_contig53583.1.1 ID=prot_P-wetherbeei_contig53583.1.1|Name=mRNA_P-wetherbeei_contig53583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp MVAIMNGRSASAAEIVGAALQDRGRAILVGSASYGKGTVQTVVRLPNEGEback to top mRNA from alignment at P-wetherbeei_contig53583:14..535+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53583.1.1 ID=mRNA_P-wetherbeei_contig53583.1.1|Name=mRNA_P-wetherbeei_contig53583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig53583:14..535+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53583:14..535+ >mRNA_P-wetherbeei_contig53583.1.1 ID=mRNA_P-wetherbeei_contig53583.1.1|Name=mRNA_P-wetherbeei_contig53583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig53583:14..535+ (Phaeothamnion wetherbeei SAG_119_79)back to top |