mRNA_P-wetherbeei_contig53541.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: UPI001BC20E9D (DUF4148 domain-containing protein n=1 Tax=Hydrogenophaga sp. TaxID=1904254 RepID=UPI001BC20E9D) HSP 1 Score: 102 bits (254), Expect = 4.390e-24 Identity = 101/177 (57.06%), Postives = 115/177 (64.97%), Query Frame = 1
Query: 22 RLTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQPVVVA------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEYVAPRSAAANTAVAAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNQLYPNRYPQPVLAQGKTREDVR 534
RL+VVAIALSTLVAGHALAADPA KTREQVRAEL +A R GD++ADG TG R NQ+ P Y+Q V A XXXXXXXXXXXXXXXXXXXXXXXXXXXXX A R+AA A + G +N+L+P+RYPQP LAQGK+R+DVR
Sbjct: 4 RLSVVAIALSTLVAGHALAADPAQAKTREQVRAELAQAQRNGDLIADGETGLRFNQVSPHLYSQATVAAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATRTAAP-AGEALSQGKTRAQVKAELAQAVRNGDVIADGESGLRYNELFPSRYPQPTLAQGKSRDDVR 179
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: A0A1Y2R894_9BURK (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R894_9BURK) HSP 1 Score: 100 bits (250), Expect = 4.970e-24 Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 1
Query: 16 NPRLTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQPVV 222
N RL+VVAIALSTLVAGHALAA+P VGKTREQVRAEL +A R GD++A+G +G R NQLYP +YAQP V
Sbjct: 3 NTRLSVVAIALSTLVAGHALAAEPTVGKTREQVRAELAQAQRNGDLIANGESGLRFNQLYPQQYAQPAV 71
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: A0A6P1IYT6_9BURK (DUF4148 domain-containing protein n=2 Tax=Hydrogenophaga sp. BPS33 TaxID=2651974 RepID=A0A6P1IYT6_9BURK) HSP 1 Score: 98.6 bits (244), Expect = 2.840e-22 Identity = 100/185 (54.05%), Postives = 117/185 (63.24%), Query Frame = 1
Query: 1 KEIVVNPRLTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQPVVVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEYVAPRSAA-------ANTAVAAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNQLYPNRYPQPVLAQGKTREDVR 534
KE V+ RL+VVA+ALSTLVAGHALAAD +VGKTR++VRAEL +AIR+GD++ADGATGQR N+L P YA V XXXXXXXXXXXXXXXXXXXXXXXXXXXXX AA A+ A A G +N+L+P +YPQ V AQG+ R DVR
Sbjct: 28 KETVMKSRLSVVALALSTLVAGHALAADASVGKTRDEVRAELAQAIRSGDLIADGATGQRYNELSPEFYAPKAVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVRAEAPVASQAAAPVVGKTRAQVKAELAEAIRTGDMVADGATGAKYNELFPQQYPQSVTAQGQAR-DVR 211
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: A0A6P1IFP6_9BURK (DUF4148 domain-containing protein n=1 Tax=Hydrogenophaga sp. PBL-H3 TaxID=434010 RepID=A0A6P1IFP6_9BURK) HSP 1 Score: 97.4 bits (241), Expect = 3.610e-22 Identity = 99/176 (56.25%), Postives = 106/176 (60.23%), Query Frame = 1
Query: 16 NPRLTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQPVVVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEYVAPRSAAANTAVAA---ASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNQLYPNRYPQPVLAQGKTREDVR 534
N RL+VVAIALSTLVAGHALAADPA KTREQVRAEL EA R G ++ADG TG R NQ+ P Y Q VV XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +A TA A A G F LYPNRYP Q K+R+DVR
Sbjct: 2 NTRLSVVAIALSTLVAGHALAADPAAAKTREQVRAELVEAQRNGTLIADGETGLRFNQVSPHLYPQATVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATRTTAPAVEVVAQGKTRAQVRAELAEAQANGELVADGETGARFKDLYPNRYPVQATVQAKSRDDVR 177
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: A0A0T2YQ46_9BURK (Uncharacterized protein n=2 Tax=unclassified Hydrogenophaga TaxID=2610897 RepID=A0A0T2YQ46_9BURK) HSP 1 Score: 96.7 bits (239), Expect = 7.520e-22 Identity = 97/169 (57.40%), Postives = 108/169 (63.91%), Query Frame = 1
Query: 16 NPRLTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQPVVVA------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEYVAPRSAAANTAVAAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNQLYPNRYPQPVL 504
N RL+VVAIALSTLVAGHALAADPA K+REQVRAEL EA RTGD++AD TG R NQ+Y + Y Q V + XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +Y A R++A V A G FNQLYPNRYPQP +
Sbjct: 2 NTRLSVVAIALSTLVAGHALAADPAAAKSREQVRAELAEAQRTGDLIADSETGLRFNQIYSNLYPQAAVASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQYAATRTSAPAVEVVA-QGKTRAEVKAELAEAQRNGDLIADSETGQRFNQLYPNRYPQPTV 169
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: UPI0014858CCF (DUF4148 domain-containing protein n=1 Tax=Hydrogenophaga sp. 2FB TaxID=2502187 RepID=UPI0014858CCF) HSP 1 Score: 96.7 bits (239), Expect = 7.890e-22 Identity = 97/170 (57.06%), Postives = 114/170 (67.06%), Query Frame = 1
Query: 22 RLTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQP-VVVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEYVAPR------SAAANTAVAAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNQLYPNRYPQPVLAQ 510
RL+VVA+ALS+LVAGHALAAD +VGKTR++VRAEL +AIR+GD++ADGATGQR N++ P YAQP VVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + A+ A A A G +N+LYPNRY QPV+AQ
Sbjct: 4 RLSVVALALSSLVAGHALAADVSVGKTRDEVRAELAQAIRSGDMIADGATGQRYNEIAPQLYAQPQAVVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADASTVAAAPAVGKTRAEVKAELAEAIRTGDMIADGATGAKYNELYPNRYAQPVMAQ 173
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: UPI0010F51F62 (DUF4148 domain-containing protein n=1 Tax=Hydrogenophaga sp. 2FB TaxID=2502187 RepID=UPI0010F51F62) HSP 1 Score: 92.8 bits (229), Expect = 2.300e-20 Identity = 49/70 (70.00%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 25 LTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQP-VVVAS 231
L+VVA+ALS+LVAGHA+AAD +VGKTR +V+AEL +AIR+GD++ADGATGQR N+L P YAQP VVAS
Sbjct: 7 LSVVALALSSLVAGHAMAADASVGKTRAEVKAELAQAIRSGDLIADGATGQRYNELSPQLYAQPQAVVAS 76
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: UPI000824F754 (DUF4148 domain-containing protein n=1 Tax=Hydrogenophaga palleronii TaxID=65655 RepID=UPI000824F754) HSP 1 Score: 91.7 bits (226), Expect = 4.940e-20 Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 1
Query: 22 RLTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQPVVVA 228
RL+VVAIALS LVAG A AADPA KTREQVRAEL +AIR GD++ADG TG +L+P++YAQPV A
Sbjct: 4 RLSVVAIALSALVAGQAFAADPAAAKTREQVRAELAQAIRNGDMIADGQTGATYKELFPAQYAQPVATA 72
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: A0A2W4TZQ9_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A2W4TZQ9_9BURK) HSP 1 Score: 92.0 bits (227), Expect = 8.430e-20 Identity = 50/71 (70.42%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 1 KEIVVNPRLTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQ 213
KE V+ RL+VVAIALSTLVAGHALAADP V KTREQVRAEL EA R G ++ADG TG R NQ+ P Y Q
Sbjct: 27 KETVMKTRLSVVAIALSTLVAGHALAADPTVAKTREQVRAELVEAQRNGSLIADGETGLRFNQVSPHLYPQ 97
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Match: A0A1F4J6K3_9BURK (Uncharacterized protein n=3 Tax=Burkholderiales TaxID=80840 RepID=A0A1F4J6K3_9BURK) HSP 1 Score: 84.7 bits (208), Expect = 4.100e-17 Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 1
Query: 28 TVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDIVADGATGQRLNQLYPSRYAQPVV 222
T + +A++TL AGHALAADPA KTREQVRAEL EA RTG+IVA+ TG+ LNQ+YP RYA VV
Sbjct: 7 TAITLAIATLSAGHALAADPATAKTREQVRAELLEAQRTGNIVANTETGELLNQVYPGRYAAEVV 71 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53541.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53541.1.1 >prot_P-wetherbeei_contig53541.1.1 ID=prot_P-wetherbeei_contig53541.1.1|Name=mRNA_P-wetherbeei_contig53541.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp KEIVVNPRLTVVAIALSTLVAGHALAADPAVGKTREQVRAELNEAIRTGDback to top mRNA from alignment at P-wetherbeei_contig53541:2..535- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53541.1.1 ID=mRNA_P-wetherbeei_contig53541.1.1|Name=mRNA_P-wetherbeei_contig53541.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig53541:2..535- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53541:2..535- >mRNA_P-wetherbeei_contig53541.1.1 ID=mRNA_P-wetherbeei_contig53541.1.1|Name=mRNA_P-wetherbeei_contig53541.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig53541:2..535- (Phaeothamnion wetherbeei SAG_119_79)back to top |