mRNA_P-wetherbeei_contig53353.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: H3G8A0_PHYRM (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8A0_PHYRM) HSP 1 Score: 57.8 bits (138), Expect = 1.360e-8 Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 4 TANPHQILSLVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
T++P + LVG +F+RCNP SD+F VH FHHIEF+C D+
Sbjct: 7 TSSPSKKTQLVGCQNFERCNPKSDRFDVHKFHHIEFFCADA 47
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: A0A0D2LZE5_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LZE5_9CHLO) HSP 1 Score: 53.1 bits (126), Expect = 2.440e-8 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 1
Query: 25 LSLVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
L LVG FKR NP SD+F VH FHHIEFWC D+
Sbjct: 19 LKLVGYDKFKRHNPKSDRFKVHRFHHIEFWCADA 52
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: A0A7S0CU10_MICPS (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CU10_MICPS) HSP 1 Score: 57.0 bits (136), Expect = 2.550e-8 Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 1
Query: 31 LVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
LVG +FKR NPMSD+F +H FHH+EFWCGD+
Sbjct: 19 LVGYKNFKRHNPMSDRFAMHGFHHVEFWCGDA 50
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: A0A7S0RWN0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RWN0_9CHLO) HSP 1 Score: 55.8 bits (133), Expect = 5.850e-8 Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 1
Query: 31 LVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
LVG A+FKR NPMSD+F VH FHH++FWC D+
Sbjct: 30 LVGHANFKRHNPMSDRFTVHSFHHLDFWCADA 61
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: A0A2J8A4J9_9CHLO (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A4J9_9CHLO) HSP 1 Score: 55.8 bits (133), Expect = 6.490e-8 Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 1
Query: 25 LSLVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
+ LVG +F R NP+SDKF VH FHHIEFWCGD+
Sbjct: 16 MRLVGYNNFVRQNPLSDKFAVHKFHHIEFWCGDA 49
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: H3G6L3_PHYRM (4-hydroxyphenylpyruvate dioxygenase n=24 Tax=Phytophthora TaxID=4783 RepID=H3G6L3_PHYRM) HSP 1 Score: 55.8 bits (133), Expect = 6.510e-8 Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 7 ANPHQILSLVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
++P + LVG +F+RCNP SD+F VH FHHIEF+C D+
Sbjct: 1 SSPSKKTQLVGCQNFERCNPKSDRFDVHKFHHIEFFCADA 40
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: UPI001BB4694E (hypothetical protein n=1 Tax=Acinetobacter baumannii TaxID=470 RepID=UPI001BB4694E) HSP 1 Score: 53.1 bits (126), Expect = 7.970e-8 Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = 1
Query: 19 QILSLVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
Q LVG +F R NPMSD+F V FHHIEFWCGD+
Sbjct: 7 QSFKLVGYKNFVRHNPMSDRFQVKKFHHIEFWCGDA 42
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: A0A803LRL0_CHEQI (Uncharacterized protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LRL0_CHEQI) HSP 1 Score: 54.7 bits (130), Expect = 1.660e-7 Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 1
Query: 31 LVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
LVG ++F R NPMSD+F V+ FHHIEFWCGD+
Sbjct: 72 LVGYSNFVRVNPMSDRFSVNKFHHIEFWCGDA 103
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: S4VDF2_PERFR (Hydroxyphenylpyruvate dioxygenase n=1 Tax=Perilla frutescens TaxID=48386 RepID=S4VDF2_PERFR) HSP 1 Score: 54.7 bits (130), Expect = 1.670e-7 Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 1
Query: 7 ANPHQILSLVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
A H LVG +F R NP SD+F VH FHH+EFWCGD+
Sbjct: 53 APAHGEFKLVGYKNFVRANPNSDRFPVHRFHHVEFWCGDA 92
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Match: Q70ZL8_CHLRE (4-hydroxyphenylpyruvate dioxygenase (Fragment) n=6 Tax=Chlamydomonas TaxID=3052 RepID=Q70ZL8_CHLRE) HSP 1 Score: 54.7 bits (130), Expect = 1.670e-7 Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 1
Query: 25 LSLVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDS 126
+ LVG +F R NP+SDKF VH FHHI+FWCGD+
Sbjct: 15 IKLVGYKNFVRQNPLSDKFTVHKFHHIDFWCGDA 48 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53353.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53353.1.1 >prot_P-wetherbeei_contig53353.1.1 ID=prot_P-wetherbeei_contig53353.1.1|Name=mRNA_P-wetherbeei_contig53353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=42bp MTANPHQILSLVGAAHFKRCNPMSDKFGVHDFHHIEFWCGDSback to top mRNA from alignment at P-wetherbeei_contig53353:84..209+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53353.1.1 ID=mRNA_P-wetherbeei_contig53353.1.1|Name=mRNA_P-wetherbeei_contig53353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=126bp|location=Sequence derived from alignment at P-wetherbeei_contig53353:84..209+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53353:84..209+ >mRNA_P-wetherbeei_contig53353.1.1 ID=mRNA_P-wetherbeei_contig53353.1.1|Name=mRNA_P-wetherbeei_contig53353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=126bp|location=Sequence derived from alignment at P-wetherbeei_contig53353:84..209+ (Phaeothamnion wetherbeei SAG_119_79)back to top |