mRNA_P-wetherbeei_contig53291.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: UPI00047C3882 (PQQ-dependent dehydrogenase, methanol/ethanol family n=2 Tax=Hyphomicrobium TaxID=81 RepID=UPI00047C3882) HSP 1 Score: 158 bits (399), Expect = 1.010e-43 Identity = 76/80 (95.00%), Postives = 79/80 (98.75%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTFALSD 240
VLWQKKLGSGIIGNPITYKIKGKQYVSIF+GLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTF+L +
Sbjct: 550 VLWQKKLGSGIIGNPITYKIKGKQYVSIFSGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTFSLGE 629
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: A0A2N2Q625_9PROT (PQQ-dependent dehydrogenase, methanol/ethanol family (Fragment) n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-8 TaxID=2013720 RepID=A0A2N2Q625_9PROT) HSP 1 Score: 148 bits (373), Expect = 2.640e-43 Identity = 68/80 (85.00%), Postives = 77/80 (96.25%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTFALSD 240
V+W +KLGSGIIGNP+TYKIKGKQYVS+FAG+GGWIG+PVTAGLDM+DK+GAIGATAMAKA+GLDKIPQGGELYTF L D
Sbjct: 135 VVWSRKLGSGIIGNPVTYKIKGKQYVSVFAGIGGWIGLPVTAGLDMDDKYGAIGATAMAKASGLDKIPQGGELYTFRLYD 214
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: A0A2S5MRK3_HYPSQ (PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MRK3_HYPSQ) HSP 1 Score: 155 bits (391), Expect = 1.510e-42 Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTFALSD 240
VLW KKLGSGIIGNPITYK+KGKQYVSIFAGLGGWIGIPVTAGLDM+DKFGAIGATAMAKATGLDKIPQGGELYTF + D
Sbjct: 560 VLWSKKLGSGIIGNPITYKVKGKQYVSIFAGLGGWIGIPVTAGLDMDDKFGAIGATAMAKATGLDKIPQGGELYTFRIGD 639
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: V5SI26_9HYPH (Methanol dehydrogenase n=2 Tax=Hyphomicrobium TaxID=81 RepID=V5SI26_9HYPH) HSP 1 Score: 150 bits (380), Expect = 5.890e-41 Identity = 70/80 (87.50%), Postives = 78/80 (97.50%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTFALSD 240
VLW +KLGSGIIGNPITYKI+GKQYV+IF+GLGGWIG+PVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGE+YTF ++D
Sbjct: 571 VLWSRKLGSGIIGNPITYKIQGKQYVTIFSGLGGWIGLPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGEVYTFRIAD 650
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: A0A6I3KHB2_9HYPH (PQQ-dependent dehydrogenase, methanol/ethanol family n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I3KHB2_9HYPH) HSP 1 Score: 147 bits (372), Expect = 6.910e-40 Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTFALSD 240
VLWQ++LGSGIIGNPITYK+KGKQYVSIFAGLGGWIGIPVTAGLDM DKFGAIGATAMAKATGLDKIPQ G LYTF L +
Sbjct: 553 VLWQQRLGSGIIGNPITYKLKGKQYVSIFAGLGGWIGIPVTAGLDMEDKFGAIGATAMAKATGLDKIPQAGMLYTFRLGE 632
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: A0A135IA46_9GAMM (Methanol dehydrogenase n=1 Tax=Enterovibrio coralii TaxID=294935 RepID=A0A135IA46_9GAMM) HSP 1 Score: 147 bits (370), Expect = 1.490e-39 Identity = 68/80 (85.00%), Postives = 76/80 (95.00%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTFALSD 240
V+W++KLGSGIIGNPITY + GKQYVS+FAGLGGWIG+PVTAGLDM+DK+GAIGATAMAKATGLDKIPQGGELYTF L D
Sbjct: 555 VVWERKLGSGIIGNPITYSVDGKQYVSVFAGLGGWIGLPVTAGLDMDDKYGAIGATAMAKATGLDKIPQGGELYTFRLFD 634
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: A0A5C7JBJ9_9CHLR (PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Thermomicrobiales bacterium TaxID=2482790 RepID=A0A5C7JBJ9_9CHLR) HSP 1 Score: 142 bits (359), Expect = 4.560e-38 Identity = 65/76 (85.53%), Postives = 74/76 (97.37%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTF 228
VLW +KLGSGIIGNPITYK+KGKQYVS+++G+GGWIG+PVTAGLDM+DK+GAIGATAMAKATGLDKIPQGG LYTF
Sbjct: 551 VLWSRKLGSGIIGNPITYKVKGKQYVSVWSGIGGWIGLPVTAGLDMDDKYGAIGATAMAKATGLDKIPQGGTLYTF 626
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: A0A534ARH4_9GAMM (PQQ-dependent dehydrogenase, methanol/ethanol family (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534ARH4_9GAMM) HSP 1 Score: 136 bits (342), Expect = 7.880e-38 Identity = 61/80 (76.25%), Postives = 72/80 (90.00%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTFALSD 240
VLWQ++LGSGIIGNPITY + GKQYVS+++G+GGWIG+PVTAGLD+NDKFGAIGATAM KA GL IPQGG LYTFA+ +
Sbjct: 205 VLWQRRLGSGIIGNPITYSVNGKQYVSVWSGIGGWIGLPVTAGLDLNDKFGAIGATAMTKAAGLSMIPQGGTLYTFAVQE 284
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: A0A2S5M9M7_HYPSQ (PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5M9M7_HYPSQ) HSP 1 Score: 141 bits (356), Expect = 1.240e-37 Identity = 68/76 (89.47%), Postives = 72/76 (94.74%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTF 228
VLW++KL SGIIGNPITYK+KGKQYVSIF GLGGWIGIPVTAGLDM+DKFGAIGATAMAKATGLDKIPQGG L TF
Sbjct: 555 VLWERKLASGIIGNPITYKVKGKQYVSIFQGLGGWIGIPVTAGLDMDDKFGAIGATAMAKATGLDKIPQGGVLSTF 630
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Match: A0A1E3VYR5_9HYPH (Methanol dehydrogenase n=3 Tax=Methyloceanibacter TaxID=1484898 RepID=A0A1E3VYR5_9HYPH) HSP 1 Score: 141 bits (355), Expect = 1.790e-37 Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 1
Query: 1 VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFGAIGATAMAKATGLDKIPQGGELYTFALSD 240
+LW +KLGSGIIGNPITYK+ GKQYVS+ +G+GGWIG+PVTAGLDMNDKFGAIGATAMAKATGL IPQGG +YTF LSD
Sbjct: 562 ILWSRKLGSGIIGNPITYKVGGKQYVSVHSGIGGWIGLPVTAGLDMNDKFGAIGATAMAKATGLTNIPQGGTVYTFRLSD 641 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53291.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53291.1.1 >prot_P-wetherbeei_contig53291.1.1 ID=prot_P-wetherbeei_contig53291.1.1|Name=mRNA_P-wetherbeei_contig53291.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp VLWQKKLGSGIIGNPITYKIKGKQYVSIFAGLGGWIGIPVTAGLDMNDKFback to top mRNA from alignment at P-wetherbeei_contig53291:297..539- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53291.1.1 ID=mRNA_P-wetherbeei_contig53291.1.1|Name=mRNA_P-wetherbeei_contig53291.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig53291:297..539- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53291:297..539- >mRNA_P-wetherbeei_contig53291.1.1 ID=mRNA_P-wetherbeei_contig53291.1.1|Name=mRNA_P-wetherbeei_contig53291.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig53291:297..539- (Phaeothamnion wetherbeei SAG_119_79)back to top |