mRNA_P-wetherbeei_contig53267.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: A0A7Y0GT99_9BURK (DUF3309 domain-containing protein n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=A0A7Y0GT99_9BURK) HSP 1 Score: 60.8 bits (146), Expect = 4.720e-11 Identity = 29/52 (55.77%), Postives = 32/52 (61.54%), Query Frame = 1
Query: 34 MSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
MSLG ILL+ +GVIPTW HSRSWGYGPSGG LTGR+
Sbjct: 1 MSLGTILLVVLILMLIGVIPTWPHSRSWGYGPSGGLGLLVIIILVLLLTGRL 52
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: A0A1F4JBP0_9BURK (DUF3309 domain-containing protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1F4JBP0_9BURK) HSP 1 Score: 59.7 bits (143), Expect = 1.350e-10 Identity = 31/52 (59.62%), Postives = 31/52 (59.62%), Query Frame = 1
Query: 34 MSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
M LG ILLI VGVIPTWSHSRSWGYGPSG LTGRM
Sbjct: 1 MGLGTILLIVLILMLVGVIPTWSHSRSWGYGPSGVLGLIVVILLVMVLTGRM 52
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: A0A3B9NY87_9PROT (DUF3309 domain-containing protein n=1 Tax=Gallionellaceae bacterium TaxID=2052162 RepID=A0A3B9NY87_9PROT) HSP 1 Score: 59.3 bits (142), Expect = 1.920e-10 Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 34 MSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
MSLG ILL+ +GVIPTW HSRSWGYGPSGG XXXXX L+GR+
Sbjct: 1 MSLGTILLVIVVLMLIGVIPTWPHSRSWGYGPSGGLGLLLXXXXXLLLSGRL 52
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: A0A5Q0BI10_9GAMM (DUF3309 domain-containing protein n=2 Tax=Methylococcaceae TaxID=403 RepID=A0A5Q0BI10_9GAMM) HSP 1 Score: 59.3 bits (142), Expect = 1.920e-10 Identity = 37/52 (71.15%), Postives = 39/52 (75.00%), Query Frame = 1
Query: 34 MSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
MSLG ILLI +GVIPTW HSR WGYGPSGG XXXXXXXX LTGR+
Sbjct: 1 MSLGTILLIILILMLIGVIPTWPHSRGWGYGPSGGLGLXXXXXXXXILTGRI 52
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: UPI00199E207C (DUF3309 domain-containing protein n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=UPI00199E207C) HSP 1 Score: 59.3 bits (142), Expect = 1.920e-10 Identity = 37/52 (71.15%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 34 MSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
MSLG ILLI VG IPTWSHSRSWGYGPSGG XXXXXXX L GR+
Sbjct: 1 MSLGTILLIVLILMLVGAIPTWSHSRSWGYGPSGGIGLVXXXXXXXLLMGRI 52
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: UPI001988137D (Uncharacterized protein n=2 Tax=Rubrivivax sp. A210 TaxID=2772301 RepID=UPI001988137D) HSP 1 Score: 59.7 bits (143), Expect = 2.020e-10 Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 1
Query: 22 KENSMSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
+E +MSLGMILLI +G +PTW HSR WGYGPSGG XXXXXXXXXXXL GR+
Sbjct: 14 EEQAMSLGMILLILLVLMLLGAVPTWPHSRGWGYGPSGGLXXXXXXXXXXXLMGRI 69
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: A0A127QZF6_9BURK (Uncharacterized protein n=2 Tax=Collimonas pratensis TaxID=279113 RepID=A0A127QZF6_9BURK) HSP 1 Score: 58.9 bits (141), Expect = 3.450e-10 Identity = 32/63 (50.79%), Postives = 36/63 (57.14%), Query Frame = 1
Query: 1 PAASSTYKENSMSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
PA S+ YKE+SM G ILLI VG +PTW HSRSWGYGPSG LTG +
Sbjct: 2 PAFSNFYKEHSM--GTILLIILILILVGALPTWPHSRSWGYGPSGISGLLVIILIVMLLTGHL 62
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: A0A4P7RDW7_9BURK (DUF3309 domain-containing protein n=1 Tax=Hydrogenophaga sp. PAMC20947 TaxID=2565558 RepID=A0A4P7RDW7_9BURK) HSP 1 Score: 58.5 bits (140), Expect = 3.880e-10 Identity = 29/52 (55.77%), Postives = 31/52 (59.62%), Query Frame = 1
Query: 34 MSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
MSLG ILLI VGVIP W HS+SWGYGPSGG LTGR+
Sbjct: 1 MSLGTILLIVLILMLVGVIPAWGHSKSWGYGPSGGLGLVLIIVIVLLLTGRI 52
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: V4PF15_9CAUL (Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 TaxID=1282362 RepID=V4PF15_9CAUL) HSP 1 Score: 58.5 bits (140), Expect = 3.880e-10 Identity = 28/52 (53.85%), Postives = 31/52 (59.62%), Query Frame = 1
Query: 34 MSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
MSLG IL+I VG +PTW HSRSWGYGPSGG LTGR+
Sbjct: 1 MSLGTILIIILVLLLVGALPTWGHSRSWGYGPSGGLGLVAVIVIILVLTGRI 52
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Match: A0A8K0VAM0_9RHOB (DUF3309 domain-containing protein n=1 Tax=Szabonella alba TaxID=2804194 RepID=A0A8K0VAM0_9RHOB) HSP 1 Score: 58.2 bits (139), Expect = 5.510e-10 Identity = 28/52 (53.85%), Postives = 31/52 (59.62%), Query Frame = 1
Query: 34 MSLGMILLIXXXXXXVGVIPTWSHSRSWGYGPSGGXXXXXXXXXXXXLTGRM 189
MSLG ILLI +GV+PTW HSRSWGYGPSGG L GR+
Sbjct: 1 MSLGTILLIVLILALIGVLPTWGHSRSWGYGPSGGLGLVLIVVLILLLMGRI 52 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53267.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53267.1.1 >prot_P-wetherbeei_contig53267.1.1 ID=prot_P-wetherbeei_contig53267.1.1|Name=mRNA_P-wetherbeei_contig53267.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp PAASSTYKENSMSLGMILLIVLVLILVGVIPTWSHSRSWGYGPSGGLGIIback to top mRNA from alignment at P-wetherbeei_contig53267:146..337- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53267.1.1 ID=mRNA_P-wetherbeei_contig53267.1.1|Name=mRNA_P-wetherbeei_contig53267.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig53267:146..337- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53267:146..337- >mRNA_P-wetherbeei_contig53267.1.1 ID=mRNA_P-wetherbeei_contig53267.1.1|Name=mRNA_P-wetherbeei_contig53267.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig53267:146..337- (Phaeothamnion wetherbeei SAG_119_79)back to top |