mRNA_P-wetherbeei_contig5307.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5307.3.1
Unique NamemRNA_P-wetherbeei_contig5307.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: L7VV19_9BACT (Succinate dehydrogenase iron-sulfur subunit n=1 Tax=uncultured bacterium A1Q1_fos_515 TaxID=1256581 RepID=L7VV19_9BACT)

HSP 1 Score: 444 bits (1141), Expect = 1.220e-156
Identity = 214/242 (88.43%), Postives = 226/242 (93.39%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLA 726
            QTGP D GHFE YR+D+ISDEASFLEMLD+LNE+LI EGR+AIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTS   I IEPWRA AFPI++DLMVDRAAFDRIVE GG+ITA TGGAPDANLIPIPK VADA+MDAAECIGCGACVAACPNGAANLFT AKVAHLNLLPQGQ ERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMH+DYRKAK  NRK+L+
Sbjct:   14 QTGPDDRGHFETYRIDTISDEASFLEMLDVLNEKLIEEGREAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSGAVITIEPWRAAAFPIIKDLMVDRAAFDRIVEAGGYITAATGGAPDANLIPIPKSVADASMDAAECIGCGACVAACPNGAANLFTAAKVAHLNLLPQGQPERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHRDYRKAKFKNRKELS 255          
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A6I3CBV4_9ACTN (Fumarate reductase iron-sulfur subunit n=4 Tax=root TaxID=1 RepID=A0A6I3CBV4_9ACTN)

HSP 1 Score: 432 bits (1112), Expect = 2.410e-152
Identity = 207/243 (85.19%), Postives = 228/243 (93.83%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
            Q GP   G FE YR+DSISDEASFLEMLD+LNE+LI+EGRDA+ FDHDCREGICG+CSLMIDGQAHGPQRGTATCQLHMRKF S   IVIEPWRAT+FPI++DLMVDR+AFDRI+E GG+IT+ TGGAPDANLIP+PKPVADAAMDAAECIGCGACVAACPNGAANLFT AKVAHLNLLPQGQAER++R E+MVETMDE+FGSCTNHGECEAACPKEISIDVIALM+KDYRKAKLANRK++AR
Sbjct:    6 QKGPDAAGAFESYRIDSISDEASFLEMLDVLNEKLIDEGRDAVTFDHDCREGICGSCSLMIDGQAHGPQRGTATCQLHMRKFKSGANIVIEPWRATSFPIIKDLMVDRSAFDRIIESGGYITSQTGGAPDANLIPVPKPVADAAMDAAECIGCGACVAACPNGAANLFTAAKVAHLNLLPQGQAERHARAESMVETMDEYFGSCTNHGECEAACPKEISIDVIALMNKDYRKAKLANRKEIAR 248          
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A3C2B7K6_9ACTN (Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B7K6_9ACTN)

HSP 1 Score: 429 bits (1104), Expect = 5.320e-151
Identity = 206/239 (86.19%), Postives = 220/239 (92.05%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRK 717
            Q GP D G FE YR+DSISDEASFLEMLD+LNE LI EGR+A+VFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKF S   IVIEPWRATAFPI++DLMVDR+  DRIVE GGFITA TGGAPDAN+IP+PKPVADAAMDAAECIGCGACVAACPNGAANLFT AKV+HLNLLPQGQAER+SRVEAMVETMDE+FGSCTNHGECEAACPK IS+D IALMHKDYRKAK+ NRK
Sbjct:   14 QDGPDDAGRFEAYRIDSISDEASFLEMLDVLNEALIEEGREAVVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFKSGDTIVIEPWRATAFPIIKDLMVDRSPLDRIVEAGGFITAATGGAPDANIIPVPKPVADAAMDAAECIGCGACVAACPNGAANLFTAAKVSHLNLLPQGQAERWSRVEAMVETMDEYFGSCTNHGECEAACPKSISLDFIALMHKDYRKAKVKNRK 252          
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A524B4M9_9ACTN (Fumarate reductase iron-sulfur subunit n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B4M9_9ACTN)

HSP 1 Score: 426 bits (1094), Expect = 1.840e-149
Identity = 201/243 (82.72%), Postives = 225/243 (92.59%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
            Q+GP + GHFE Y++DSISDEASFLEMLD+LNE+LI E ++ + FDHDCREGICGTCSLMI+GQAHGP+R TATCQLHMRKF S  EIVIEPWRA AFPI++DLMVDR+AFDRI+E GGFITAPTGGAPDANLIPIPKPVADAAMD+A+CIGCGACVAACPNGAANLFT AK++HLNLLPQGQAERY RVEAMVETMDE+FGSCTNHGECEAACPKEIS+DVIALM+KDYR AK  NRK+L+R
Sbjct:   15 QSGPDNAGHFESYKIDSISDEASFLEMLDVLNEKLIGENKEPVTFDHDCREGICGTCSLMINGQAHGPERATATCQLHMRKFKSGDEIVIEPWRAQAFPIVKDLMVDRSAFDRIIESGGFITAPTGGAPDANLIPIPKPVADAAMDSAQCIGCGACVAACPNGAANLFTAAKISHLNLLPQGQAERYKRVEAMVETMDEYFGSCTNHGECEAACPKEISVDVIALMNKDYRAAKFKNRKELSR 257          
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A4P5RT84_9ACTN (Succinate dehydrogenase iron-sulfur subunit n=7 Tax=root TaxID=1 RepID=A0A4P5RT84_9ACTN)

HSP 1 Score: 422 bits (1084), Expect = 6.150e-148
Identity = 201/243 (82.72%), Postives = 224/243 (92.18%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
            Q+GP+D GHFE Y MD ISDEASFLEMLD+LNE LI E +  +VFDHDCREGICGTCSLMI+GQAHGP+R T TCQLHMRKF S  EIVIEPWRA+AFPI++DLMVDR+AFDRI+E GG+ITAPTGGAPDANLIPIPK VADAAMDA++CIGCGACVAACPNGAANLFTGAK+AHLNLLPQGQAER+ R EAMVETMDE+FGSCTNHGECEAACPKEISIDVIALM+KDYRK+KL NRK+++R
Sbjct:   15 QSGPTDTGHFENYVMDEISDEASFLEMLDVLNEGLIGENKLPVVFDHDCREGICGTCSLMINGQAHGPERSTTTCQLHMRKFKSGDEIVIEPWRASAFPIIKDLMVDRSAFDRIIESGGYITAPTGGAPDANLIPIPKTVADAAMDASQCIGCGACVAACPNGAANLFTGAKIAHLNLLPQGQAERFKRTEAMVETMDEYFGSCTNHGECEAACPKEISIDVIALMNKDYRKSKLKNRKEISR 257          
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A6I3N010_9ACTN (Succinate dehydrogenase iron-sulfur subunit n=2 Tax=root TaxID=1 RepID=A0A6I3N010_9ACTN)

HSP 1 Score: 421 bits (1083), Expect = 8.730e-148
Identity = 200/243 (82.30%), Postives = 222/243 (91.36%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
            Q GP D GHFE Y++D ISDEASFLEMLD LNEQLI +G++AIVFDHDCREGICGTCSLMI+GQAHGP+R TATCQLHMRKF+S  EIVIEPWRA AFPI++DLMVDR+AFDRI+E GGFIT+ TGGAPDANLIPIPKPVAD+AMD+AECIGCGACVAACPNGAANLFT AK+AHLNLLPQGQAERY R E+M+E MDE+FGSCTNHGECEAACPKEISIDVIAL + DYRKAKL NRK ++R
Sbjct:   15 QNGPKDTGHFETYKVDEISDEASFLEMLDYLNEQLITDGKEAIVFDHDCREGICGTCSLMINGQAHGPERSTATCQLHMRKFSSGAEIVIEPWRAAAFPIIKDLMVDRSAFDRIIESGGFITSVTGGAPDANLIPIPKPVADSAMDSAECIGCGACVAACPNGAANLFTSAKIAHLNLLPQGQAERYKRAESMIEKMDEYFGSCTNHGECEAACPKEISIDVIALANADYRKAKLKNRKFISR 257          
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A6I3F0T0_9ACTN (Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=4 Tax=root TaxID=1 RepID=A0A6I3F0T0_9ACTN)

HSP 1 Score: 421 bits (1081), Expect = 5.150e-147
Identity = 202/238 (84.87%), Postives = 218/238 (91.60%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANR 714
            Q GP+D G FE Y + SISDEASFLE+LD+LNEQLI EG+DAI FDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKF S   IV+EPWRATAFPIL+DLMVDR+  DRIVE GGFITA TGGAPDAN+IPIPKPVADAAMDAAECIGCGACVAACPNGAANLFT AKV+HLNLLPQGQAER+SRVEAMVETMDE+FGSCTNHGECEAACPK ISID IA+MHKD+R+AK+ NR
Sbjct:   45 QDGPADSGRFESYLVGSISDEASFLELLDVLNEQLIGEGQDAIAFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFASGDTIVVEPWRATAFPILKDLMVDRSPLDRIVEAGGFITAATGGAPDANIIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTAAKVSHLNLLPQGQAERWSRVEAMVETMDEYFGSCTNHGECEAACPKSISIDFIAMMHKDFRRAKVKNR 282          
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A6L6CV82_9ACTN (Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=8 Tax=root TaxID=1 RepID=A0A6L6CV82_9ACTN)

HSP 1 Score: 416 bits (1070), Expect = 8.340e-146
Identity = 199/244 (81.56%), Postives = 222/244 (90.98%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLARQ 732
            Q GP   G+FE + +D I+DEASFLEMLDILN+ L++ G++A+VFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMR+F  N  I IEPWRA+AFP+++DLMVDR+AFDRI+E GG+ITA TGGAPDANLIPI K VADAAMD+AECIGCGACVAACPNGAANLFT AKVAHLN LPQGQAER+SRVE MVETMDE+FGSCTNHGECEAACPKEISIDVIALMHKDYRKAK +NRKDLAR+
Sbjct:   15 QDGPQAKGNFETHVIDEITDEASFLEMLDILNDNLVHAGKEAVVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRQFQDNAVITIEPWRASAFPLIKDLMVDRSAFDRIIESGGYITAETGGAPDANLIPIAKTVADAAMDSAECIGCGACVAACPNGAANLFTAAKVAHLNRLPQGQAERFSRVETMVETMDEYFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKFSNRKDLARK 258          
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A7W1ZA60_9ACTN (Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1ZA60_9ACTN)

HSP 1 Score: 416 bits (1070), Expect = 9.290e-146
Identity = 198/243 (81.48%), Postives = 219/243 (90.12%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
            Q GP DPG+FE YR++ IS+EASFLE+LDILNE+LI+EG+DAIVFDHDCREGICGTCSLMIDGQAHGPQ GTATCQLHMR F S  EIV+EPWRA+AFP+++DLM DR+  DRIVE GGFITAPTGGAPDANLIP+PKPVAD+AMDAA CIGCGACVAACPNGAANLFT AKVAHLNLLPQGQAERY RVE MVETM+++FGSCTNHGECE ACPKEISID IALM+ DY KAK  NRK L+R
Sbjct:   18 QAGPHDPGNFESYRIEEISEEASFLELLDILNEKLISEGQDAIVFDHDCREGICGTCSLMIDGQAHGPQLGTATCQLHMRNFASGAEIVVEPWRASAFPVIKDLMTDRSTLDRIVEQGGFITAPTGGAPDANLIPVPKPVADSAMDAAACIGCGACVAACPNGAANLFTAAKVAHLNLLPQGQAERYERVEGMVETMEDYFGSCTNHGECEKACPKEISIDFIALMNADYLKAKFKNRKSLSR 260          
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A094P6S9_9ACTN (Succinate dehydrogenase iron-sulfur protein n=4 Tax=root TaxID=1 RepID=A0A094P6S9_9ACTN)

HSP 1 Score: 416 bits (1069), Expect = 1.190e-145
Identity = 200/244 (81.97%), Postives = 225/244 (92.21%), Query Frame = 1
Query:    1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLARQ 732
            Q GP+  G+FE + +D I+DEASFLEMLDILN++L+ EG++A+VFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMR+F SN  I IEPWRA+AFPI++DLMVDR+AFDRI+E GG+I+A TGGAPDANLIPI K VADAAMD+A CIGCGACVAACPNGAANLFTGAK+AHL+ LPQGQAERYSRVEAMVETMDE FGSCTNHGECEAACPKEISIDVIALM+KD+RKAK ANRKDLAR+
Sbjct:   15 QAGPAAKGNFETHVVDEITDEASFLEMLDILNDKLVTEGKEAVVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRQFKSNDTITIEPWRASAFPIIKDLMVDRSAFDRIIESGGYISADTGGAPDANLIPISKIVADAAMDSAACIGCGACVAACPNGAANLFTGAKIAHLSRLPQGQAERYSRVEAMVETMDEKFGSCTNHGECEAACPKEISIDVIALMNKDFRKAKFANRKDLARK 258          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L7VV19_9BACT1.220e-15688.43Succinate dehydrogenase iron-sulfur subunit n=1 Ta... [more]
A0A6I3CBV4_9ACTN2.410e-15285.19Fumarate reductase iron-sulfur subunit n=4 Tax=roo... [more]
A0A3C2B7K6_9ACTN5.320e-15186.19Succinate dehydrogenase/fumarate reductase iron-su... [more]
A0A524B4M9_9ACTN1.840e-14982.72Fumarate reductase iron-sulfur subunit n=1 Tax=Aci... [more]
A0A4P5RT84_9ACTN6.150e-14882.72Succinate dehydrogenase iron-sulfur subunit n=7 Ta... [more]
A0A6I3N010_9ACTN8.730e-14882.30Succinate dehydrogenase iron-sulfur subunit n=2 Ta... [more]
A0A6I3F0T0_9ACTN5.150e-14784.87Succinate dehydrogenase/fumarate reductase iron-su... [more]
A0A6L6CV82_9ACTN8.340e-14681.56Succinate dehydrogenase/fumarate reductase iron-su... [more]
A0A7W1ZA60_9ACTN9.290e-14681.48Succinate dehydrogenase/fumarate reductase iron-su... [more]
A0A094P6S9_9ACTN1.190e-14581.97Succinate dehydrogenase iron-sulfur protein n=4 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5307contigP-wetherbeei_contig5307:3185..3919 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1313172.YM304_07490
Preferred namesdhB
PFAMsFer2_3
Model size735
Max annot lvl84992|Acidimicrobiia
KEGG rclassRC00045
KEGG koko:K00240
KEGG ReactionR02164
KEGG Pathwayko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011,M00149,M00173,M00374,M00376
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.63e-140
EggNOG OGsCOG0479@1|root,COG0479@2|Bacteria,2GP9C@201174|Actinobacteria,4CNED@84992|Acidimicrobiia
EC1.3.5.1,1.3.5.4
Description2Fe-2S iron-sulfur cluster binding domain
Cds size735
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186794.788874-CDS-P-wetherbeei_contig5307:3184..39191683186794.788874-CDS-P-wetherbeei_contig5307:3184..3919Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5307 3185..3919 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5307.3.1prot_P-wetherbeei_contig5307.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5307 3185..3919 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5307.3.1

>prot_P-wetherbeei_contig5307.3.1 ID=prot_P-wetherbeei_contig5307.3.1|Name=mRNA_P-wetherbeei_contig5307.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp
QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCR
EGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPI
LRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAEC
IGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEH
FGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLARQ*
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mRNA from alignment at P-wetherbeei_contig5307:3185..3919-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5307.3.1 ID=mRNA_P-wetherbeei_contig5307.3.1|Name=mRNA_P-wetherbeei_contig5307.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig5307:3185..3919- (Phaeothamnion wetherbeei SAG_119_79)
CAGACGGGACCGTCGGACCCCGGTCACTTCGAGGTCTACCGGATGGACTC GATCAGCGACGAGGCCTCGTTCCTGGAGATGCTCGACATCCTCAACGAGC AGTTGATCAACGAGGGTCGCGACGCGATCGTCTTCGACCACGACTGCCGC GAGGGCATCTGCGGCACGTGCTCGCTGATGATCGACGGCCAGGCCCACGG CCCGCAGCGCGGCACGGCGACCTGCCAGCTGCACATGCGCAAGTTCACGT CGAACCGCGAGATCGTCATCGAGCCCTGGCGTGCCACGGCGTTCCCGATC CTGCGCGACCTGATGGTGGATCGTGCCGCGTTCGACCGCATCGTCGAGGT CGGTGGGTTCATCACCGCGCCCACCGGTGGTGCGCCCGACGCCAACCTGA TCCCGATCCCCAAGCCGGTCGCCGACGCGGCGATGGACGCGGCCGAGTGC ATCGGGTGCGGTGCATGCGTTGCCGCCTGTCCGAACGGCGCGGCGAACCT GTTCACCGGCGCGAAGGTCGCCCACCTCAACCTGCTGCCGCAGGGCCAGG CCGAGCGCTACAGCCGCGTCGAGGCGATGGTCGAGACGATGGACGAGCAC TTCGGTTCGTGCACGAACCACGGCGAGTGCGAAGCAGCGTGCCCGAAGGA GATCTCGATCGACGTGATTGCCCTCATGCACAAGGACTACCGCAAGGCCA AGCTCGCCAACCGCAAAGACCTCGCCCGCCAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5307:3185..3919-

>mRNA_P-wetherbeei_contig5307.3.1 ID=mRNA_P-wetherbeei_contig5307.3.1|Name=mRNA_P-wetherbeei_contig5307.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig5307:3185..3919- (Phaeothamnion wetherbeei SAG_119_79)
CAGACGGGACCGTCGGACCCCGGTCACTTCGAGGTCTACCGGATGGACTC
GATCAGCGACGAGGCCTCGTTCCTGGAGATGCTCGACATCCTCAACGAGC
AGTTGATCAACGAGGGTCGCGACGCGATCGTCTTCGACCACGACTGCCGC
GAGGGCATCTGCGGCACGTGCTCGCTGATGATCGACGGCCAGGCCCACGG
CCCGCAGCGCGGCACGGCGACCTGCCAGCTGCACATGCGCAAGTTCACGT
CGAACCGCGAGATCGTCATCGAGCCCTGGCGTGCCACGGCGTTCCCGATC
CTGCGCGACCTGATGGTGGATCGTGCCGCGTTCGACCGCATCGTCGAGGT
CGGTGGGTTCATCACCGCGCCCACCGGTGGTGCGCCCGACGCCAACCTGA
TCCCGATCCCCAAGCCGGTCGCCGACGCGGCGATGGACGCGGCCGAGTGC
ATCGGGTGCGGTGCATGCGTTGCCGCCTGTCCGAACGGCGCGGCGAACCT
GTTCACCGGCGCGAAGGTCGCCCACCTCAACCTGCTGCCGCAGGGCCAGG
CCGAGCGCTACAGCCGCGTCGAGGCGATGGTCGAGACGATGGACGAGCAC
TTCGGTTCGTGCACGAACCACGGCGAGTGCGAAGCAGCGTGCCCGAAGGA
GATCTCGATCGACGTGATTGCCCTCATGCACAAGGACTACCGCAAGGCCA
AGCTCGCCAACCGCAAAGACCTCGCCCGCCAGTAG
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