mRNA_P-wetherbeei_contig5307.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: L7VV19_9BACT (Succinate dehydrogenase iron-sulfur subunit n=1 Tax=uncultured bacterium A1Q1_fos_515 TaxID=1256581 RepID=L7VV19_9BACT) HSP 1 Score: 444 bits (1141), Expect = 1.220e-156 Identity = 214/242 (88.43%), Postives = 226/242 (93.39%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLA 726
QTGP D GHFE YR+D+ISDEASFLEMLD+LNE+LI EGR+AIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTS I IEPWRA AFPI++DLMVDRAAFDRIVE GG+ITA TGGAPDANLIPIPK VADA+MDAAECIGCGACVAACPNGAANLFT AKVAHLNLLPQGQ ERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMH+DYRKAK NRK+L+
Sbjct: 14 QTGPDDRGHFETYRIDTISDEASFLEMLDVLNEKLIEEGREAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSGAVITIEPWRAAAFPIIKDLMVDRAAFDRIVEAGGYITAATGGAPDANLIPIPKSVADASMDAAECIGCGACVAACPNGAANLFTAAKVAHLNLLPQGQPERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHRDYRKAKFKNRKELS 255
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A6I3CBV4_9ACTN (Fumarate reductase iron-sulfur subunit n=4 Tax=root TaxID=1 RepID=A0A6I3CBV4_9ACTN) HSP 1 Score: 432 bits (1112), Expect = 2.410e-152 Identity = 207/243 (85.19%), Postives = 228/243 (93.83%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
Q GP G FE YR+DSISDEASFLEMLD+LNE+LI+EGRDA+ FDHDCREGICG+CSLMIDGQAHGPQRGTATCQLHMRKF S IVIEPWRAT+FPI++DLMVDR+AFDRI+E GG+IT+ TGGAPDANLIP+PKPVADAAMDAAECIGCGACVAACPNGAANLFT AKVAHLNLLPQGQAER++R E+MVETMDE+FGSCTNHGECEAACPKEISIDVIALM+KDYRKAKLANRK++AR
Sbjct: 6 QKGPDAAGAFESYRIDSISDEASFLEMLDVLNEKLIDEGRDAVTFDHDCREGICGSCSLMIDGQAHGPQRGTATCQLHMRKFKSGANIVIEPWRATSFPIIKDLMVDRSAFDRIIESGGYITSQTGGAPDANLIPVPKPVADAAMDAAECIGCGACVAACPNGAANLFTAAKVAHLNLLPQGQAERHARAESMVETMDEYFGSCTNHGECEAACPKEISIDVIALMNKDYRKAKLANRKEIAR 248
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A3C2B7K6_9ACTN (Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B7K6_9ACTN) HSP 1 Score: 429 bits (1104), Expect = 5.320e-151 Identity = 206/239 (86.19%), Postives = 220/239 (92.05%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRK 717
Q GP D G FE YR+DSISDEASFLEMLD+LNE LI EGR+A+VFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKF S IVIEPWRATAFPI++DLMVDR+ DRIVE GGFITA TGGAPDAN+IP+PKPVADAAMDAAECIGCGACVAACPNGAANLFT AKV+HLNLLPQGQAER+SRVEAMVETMDE+FGSCTNHGECEAACPK IS+D IALMHKDYRKAK+ NRK
Sbjct: 14 QDGPDDAGRFEAYRIDSISDEASFLEMLDVLNEALIEEGREAVVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFKSGDTIVIEPWRATAFPIIKDLMVDRSPLDRIVEAGGFITAATGGAPDANIIPVPKPVADAAMDAAECIGCGACVAACPNGAANLFTAAKVSHLNLLPQGQAERWSRVEAMVETMDEYFGSCTNHGECEAACPKSISLDFIALMHKDYRKAKVKNRK 252
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A524B4M9_9ACTN (Fumarate reductase iron-sulfur subunit n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B4M9_9ACTN) HSP 1 Score: 426 bits (1094), Expect = 1.840e-149 Identity = 201/243 (82.72%), Postives = 225/243 (92.59%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
Q+GP + GHFE Y++DSISDEASFLEMLD+LNE+LI E ++ + FDHDCREGICGTCSLMI+GQAHGP+R TATCQLHMRKF S EIVIEPWRA AFPI++DLMVDR+AFDRI+E GGFITAPTGGAPDANLIPIPKPVADAAMD+A+CIGCGACVAACPNGAANLFT AK++HLNLLPQGQAERY RVEAMVETMDE+FGSCTNHGECEAACPKEIS+DVIALM+KDYR AK NRK+L+R
Sbjct: 15 QSGPDNAGHFESYKIDSISDEASFLEMLDVLNEKLIGENKEPVTFDHDCREGICGTCSLMINGQAHGPERATATCQLHMRKFKSGDEIVIEPWRAQAFPIVKDLMVDRSAFDRIIESGGFITAPTGGAPDANLIPIPKPVADAAMDSAQCIGCGACVAACPNGAANLFTAAKISHLNLLPQGQAERYKRVEAMVETMDEYFGSCTNHGECEAACPKEISVDVIALMNKDYRAAKFKNRKELSR 257
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A4P5RT84_9ACTN (Succinate dehydrogenase iron-sulfur subunit n=7 Tax=root TaxID=1 RepID=A0A4P5RT84_9ACTN) HSP 1 Score: 422 bits (1084), Expect = 6.150e-148 Identity = 201/243 (82.72%), Postives = 224/243 (92.18%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
Q+GP+D GHFE Y MD ISDEASFLEMLD+LNE LI E + +VFDHDCREGICGTCSLMI+GQAHGP+R T TCQLHMRKF S EIVIEPWRA+AFPI++DLMVDR+AFDRI+E GG+ITAPTGGAPDANLIPIPK VADAAMDA++CIGCGACVAACPNGAANLFTGAK+AHLNLLPQGQAER+ R EAMVETMDE+FGSCTNHGECEAACPKEISIDVIALM+KDYRK+KL NRK+++R
Sbjct: 15 QSGPTDTGHFENYVMDEISDEASFLEMLDVLNEGLIGENKLPVVFDHDCREGICGTCSLMINGQAHGPERSTTTCQLHMRKFKSGDEIVIEPWRASAFPIIKDLMVDRSAFDRIIESGGYITAPTGGAPDANLIPIPKTVADAAMDASQCIGCGACVAACPNGAANLFTGAKIAHLNLLPQGQAERFKRTEAMVETMDEYFGSCTNHGECEAACPKEISIDVIALMNKDYRKSKLKNRKEISR 257
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A6I3N010_9ACTN (Succinate dehydrogenase iron-sulfur subunit n=2 Tax=root TaxID=1 RepID=A0A6I3N010_9ACTN) HSP 1 Score: 421 bits (1083), Expect = 8.730e-148 Identity = 200/243 (82.30%), Postives = 222/243 (91.36%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
Q GP D GHFE Y++D ISDEASFLEMLD LNEQLI +G++AIVFDHDCREGICGTCSLMI+GQAHGP+R TATCQLHMRKF+S EIVIEPWRA AFPI++DLMVDR+AFDRI+E GGFIT+ TGGAPDANLIPIPKPVAD+AMD+AECIGCGACVAACPNGAANLFT AK+AHLNLLPQGQAERY R E+M+E MDE+FGSCTNHGECEAACPKEISIDVIAL + DYRKAKL NRK ++R
Sbjct: 15 QNGPKDTGHFETYKVDEISDEASFLEMLDYLNEQLITDGKEAIVFDHDCREGICGTCSLMINGQAHGPERSTATCQLHMRKFSSGAEIVIEPWRAAAFPIIKDLMVDRSAFDRIIESGGFITSVTGGAPDANLIPIPKPVADSAMDSAECIGCGACVAACPNGAANLFTSAKIAHLNLLPQGQAERYKRAESMIEKMDEYFGSCTNHGECEAACPKEISIDVIALANADYRKAKLKNRKFISR 257
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A6I3F0T0_9ACTN (Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=4 Tax=root TaxID=1 RepID=A0A6I3F0T0_9ACTN) HSP 1 Score: 421 bits (1081), Expect = 5.150e-147 Identity = 202/238 (84.87%), Postives = 218/238 (91.60%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANR 714
Q GP+D G FE Y + SISDEASFLE+LD+LNEQLI EG+DAI FDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKF S IV+EPWRATAFPIL+DLMVDR+ DRIVE GGFITA TGGAPDAN+IPIPKPVADAAMDAAECIGCGACVAACPNGAANLFT AKV+HLNLLPQGQAER+SRVEAMVETMDE+FGSCTNHGECEAACPK ISID IA+MHKD+R+AK+ NR
Sbjct: 45 QDGPADSGRFESYLVGSISDEASFLELLDVLNEQLIGEGQDAIAFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFASGDTIVVEPWRATAFPILKDLMVDRSPLDRIVEAGGFITAATGGAPDANIIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTAAKVSHLNLLPQGQAERWSRVEAMVETMDEYFGSCTNHGECEAACPKSISIDFIAMMHKDFRRAKVKNR 282
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A6L6CV82_9ACTN (Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=8 Tax=root TaxID=1 RepID=A0A6L6CV82_9ACTN) HSP 1 Score: 416 bits (1070), Expect = 8.340e-146 Identity = 199/244 (81.56%), Postives = 222/244 (90.98%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLARQ 732
Q GP G+FE + +D I+DEASFLEMLDILN+ L++ G++A+VFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMR+F N I IEPWRA+AFP+++DLMVDR+AFDRI+E GG+ITA TGGAPDANLIPI K VADAAMD+AECIGCGACVAACPNGAANLFT AKVAHLN LPQGQAER+SRVE MVETMDE+FGSCTNHGECEAACPKEISIDVIALMHKDYRKAK +NRKDLAR+
Sbjct: 15 QDGPQAKGNFETHVIDEITDEASFLEMLDILNDNLVHAGKEAVVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRQFQDNAVITIEPWRASAFPLIKDLMVDRSAFDRIIESGGYITAETGGAPDANLIPIAKTVADAAMDSAECIGCGACVAACPNGAANLFTAAKVAHLNRLPQGQAERFSRVETMVETMDEYFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKFSNRKDLARK 258
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A7W1ZA60_9ACTN (Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1ZA60_9ACTN) HSP 1 Score: 416 bits (1070), Expect = 9.290e-146 Identity = 198/243 (81.48%), Postives = 219/243 (90.12%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLAR 729
Q GP DPG+FE YR++ IS+EASFLE+LDILNE+LI+EG+DAIVFDHDCREGICGTCSLMIDGQAHGPQ GTATCQLHMR F S EIV+EPWRA+AFP+++DLM DR+ DRIVE GGFITAPTGGAPDANLIP+PKPVAD+AMDAA CIGCGACVAACPNGAANLFT AKVAHLNLLPQGQAERY RVE MVETM+++FGSCTNHGECE ACPKEISID IALM+ DY KAK NRK L+R
Sbjct: 18 QAGPHDPGNFESYRIEEISEEASFLELLDILNEKLISEGQDAIVFDHDCREGICGTCSLMIDGQAHGPQLGTATCQLHMRNFASGAEIVVEPWRASAFPVIKDLMTDRSTLDRIVEQGGFITAPTGGAPDANLIPVPKPVADSAMDAAACIGCGACVAACPNGAANLFTAAKVAHLNLLPQGQAERYERVEGMVETMEDYFGSCTNHGECEKACPKEISIDFIALMNADYLKAKFKNRKSLSR 260
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Match: A0A094P6S9_9ACTN (Succinate dehydrogenase iron-sulfur protein n=4 Tax=root TaxID=1 RepID=A0A094P6S9_9ACTN) HSP 1 Score: 416 bits (1069), Expect = 1.190e-145 Identity = 200/244 (81.97%), Postives = 225/244 (92.21%), Query Frame = 1
Query: 1 QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRKFTSNREIVIEPWRATAFPILRDLMVDRAAFDRIVEVGGFITAPTGGAPDANLIPIPKPVADAAMDAAECIGCGACVAACPNGAANLFTGAKVAHLNLLPQGQAERYSRVEAMVETMDEHFGSCTNHGECEAACPKEISIDVIALMHKDYRKAKLANRKDLARQ 732
Q GP+ G+FE + +D I+DEASFLEMLDILN++L+ EG++A+VFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMR+F SN I IEPWRA+AFPI++DLMVDR+AFDRI+E GG+I+A TGGAPDANLIPI K VADAAMD+A CIGCGACVAACPNGAANLFTGAK+AHL+ LPQGQAERYSRVEAMVETMDE FGSCTNHGECEAACPKEISIDVIALM+KD+RKAK ANRKDLAR+
Sbjct: 15 QAGPAAKGNFETHVVDEITDEASFLEMLDILNDKLVTEGKEAVVFDHDCREGICGTCSLMIDGQAHGPQRGTATCQLHMRQFKSNDTITIEPWRASAFPIIKDLMVDRSAFDRIIESGGYISADTGGAPDANLIPISKIVADAAMDSAACIGCGACVAACPNGAANLFTGAKIAHLSRLPQGQAERYSRVEAMVETMDEKFGSCTNHGECEAACPKEISIDVIALMNKDFRKAKFANRKDLARK 258 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5307.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5307.3.1 >prot_P-wetherbeei_contig5307.3.1 ID=prot_P-wetherbeei_contig5307.3.1|Name=mRNA_P-wetherbeei_contig5307.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp QTGPSDPGHFEVYRMDSISDEASFLEMLDILNEQLINEGRDAIVFDHDCRback to top mRNA from alignment at P-wetherbeei_contig5307:3185..3919- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5307.3.1 ID=mRNA_P-wetherbeei_contig5307.3.1|Name=mRNA_P-wetherbeei_contig5307.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig5307:3185..3919- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5307:3185..3919- >mRNA_P-wetherbeei_contig5307.3.1 ID=mRNA_P-wetherbeei_contig5307.3.1|Name=mRNA_P-wetherbeei_contig5307.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig5307:3185..3919- (Phaeothamnion wetherbeei SAG_119_79)back to top |