mRNA_P-wetherbeei_contig52730.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52730.1.1 vs. uniprot
Match: A0A7Z9UCG8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UCG8_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 5.320e-20 Identity = 55/157 (35.03%), Postives = 83/157 (52.87%), Query Frame = 1
Query: 1 RILLGRCLMSIQRTQMFRTYGSSSVVHYAINWLGCSRDEAYDVLLVAKRLEGLPLMTKAAENGQVGWCALRAVLRRATPENEEMWLEEAQNSSMNRLLWLLRNDGSPEAEREADLVR------LELYLPTAVSQMFQRATRRICQSEGRRVPAAEVF 453
++ LGRCL++I+ T+ F+ +G S HYA+ LG +R EA D VA+ L LP ++ AE G++ W LR ++R+A+ E EE+WL+ AQ + ++ L+ E DL L L +M + ATR + GR V AEV
Sbjct: 40 KLTLGRCLLAIEETEDFKKFGCCSSTHYAVAKLGVNRKEANDCKRVARELLRLPELSLVAEEGRISWGKLREIVRKASLETEELWLQLAQKYNDQQIQILVSKTPPGAVPGEVDLEDNAYNSLLRCPLSPQAYRMLEEATRAYSIARGRLVTKAEVI 196
BLAST of mRNA_P-wetherbeei_contig52730.1.1 vs. uniprot
Match: A0A7Z9PZF7_9BACT (HNH endonuclease n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PZF7_9BACT) HSP 1 Score: 89.0 bits (219), Expect = 1.160e-17 Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 1
Query: 1 RILLGRCLMSIQRTQMFRTYGSSSVVHYAINWLGCSRDEAYDVLLVAKRLEGLPLMTKAAENGQVGWCALRAVLRRATPENEEMWLEEAQNSSMNRLLWLLRNDGSPEAEREADLVR------LELYLPTAVSQMFQRATRRICQSEGRRVPAAEVF 453
++ LGRCL++IQ T+ F+ +G SS HYA LG SR EA + VA+ L LP +T AAE G++ W LR ++R A+PE +E WLE ++ + N++ L+ + DL L+ L +S M RA R + AEV
Sbjct: 39 KLTLGRCLLAIQETRDFKNFGCSSSTHYACAKLGMSRREANECKRVARALMPLPELTLAAEEGRIAWGKLREIVRVASPETDEFWLELSKRYTDNQVQILVSRTPDGCIPGDVDLAESLSRSVLKCPLDAHLSLMLDRAMRVHSLKKNEASTLAEVL 195
BLAST of mRNA_P-wetherbeei_contig52730.1.1 vs. uniprot
Match: A0A534WG24_9DELT (HNH endonuclease n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534WG24_9DELT) HSP 1 Score: 64.7 bits (156), Expect = 3.260e-9 Identity = 41/161 (25.47%), Postives = 76/161 (47.20%), Query Frame = 1
Query: 1 RILLGRCLMSIQRTQMFRTYGSSSVVHYAINWLGCSRDEAYDVLLVAKRLEGLPLMTKAAENGQVGWCALRAVLRRATPENEEMWLEEAQNSSMNRLLWLLRN----DGSPEAEREADLVRLELYLPTAVSQMFQRATRRICQSEGRRVPAAEVFELVLAD 471
R++LGR + + + G + + YA LG S E + V+ RLEGLP + +A ENG+V W +R ++ ATP+ E WL A+ ++ L +R +G + + E +R + P + ++++ + G + + E + A+
Sbjct: 45 RMVLGRLARAFLHVRGQQGLGFARLGDYARERLGMSARELQSLARVSARLEGLPEIRRAYENGEVSWAQVRLLIGVATPDTEGGWLALARGRTVRALAARIRGVRGGEGGEDDDAEEPHIRFRVRCPRRLPRVWRDTVELARRMAGTELTVGQAAEAIAAE 205
BLAST of mRNA_P-wetherbeei_contig52730.1.1 vs. uniprot
Match: A0A534ZIA1_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534ZIA1_9DELT) HSP 1 Score: 54.7 bits (130), Expect = 2.020e-6 Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 1 RILLGRCLMSIQRTQMFRTYGSSSVVHYAINWLGCSRDEAYDVLLVAKRLEGLPLMTKAAENGQVGWCALRAVLRRATPENEEMWLEEAQ 270
R++LGR + + + G + + YA LG S E + V+ RLEGLP + +A ENG+V W +R ++ ATP+ E WL A+
Sbjct: 45 RMVLGRLGRAFLHVRGQQGLGFARLGDYARERLGMSARELQSLARVSARLEGLPEIRRAYENGEVSWAQVRLLIGVATPDTEGGWLALAR 134
BLAST of mRNA_P-wetherbeei_contig52730.1.1 vs. uniprot
Match: A0A356KLN5_9BACT (HNHc domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356KLN5_9BACT) HSP 1 Score: 52.4 bits (124), Expect = 5.840e-5 Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 22 LMSIQRTQMFRTYGSSSVVHYAINWLGCSRDEAYDVLLVAKRLEGLPLMTKAAENGQVGWCALRAVLRRATPENEEMWLEEAQNSSMNRL 291
L ++R Q++R G SS+ YA LG S + D++ + +R++ L + A GQ+ + V R ATPENE+ WL +A + L
Sbjct: 84 LAEMERAQLWRALGYSSLSRYAFEVLGYSSSKTSDLVRIGRRVD-LEKLQDAFRQGQLSYKFATEVARVATPENEDEWLAKADELPLRDL 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52730.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52730.1.1 >prot_P-wetherbeei_contig52730.1.1 ID=prot_P-wetherbeei_contig52730.1.1|Name=mRNA_P-wetherbeei_contig52730.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp MSIQRTQMFRTYGSSSVVHYAINWLGCSRDEAYDVLLVAKRLEGLPLMTKback to top mRNA from alignment at P-wetherbeei_contig52730:32..502- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52730.1.1 ID=mRNA_P-wetherbeei_contig52730.1.1|Name=mRNA_P-wetherbeei_contig52730.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig52730:32..502- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52730:32..502- >mRNA_P-wetherbeei_contig52730.1.1 ID=mRNA_P-wetherbeei_contig52730.1.1|Name=mRNA_P-wetherbeei_contig52730.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig52730:32..502- (Phaeothamnion wetherbeei SAG_119_79)back to top |