mRNA_P-wetherbeei_contig52244.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: A0A6N7GLY9_9HYPH (NUDIX domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GLY9_9HYPH) HSP 1 Score: 59.7 bits (143), Expect = 3.680e-9 Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 1 GPARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAIKSHRE 141
GP REL RD+KAV WLPL KAI L+R HE+ FLA+ GP +K+ ++
Sbjct: 97 GPVRELTRDVKAVKWLPLKKAIDTLSRAHEKVFLANVGPVVVKAAKQ 143
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: UPI001BAA35D6 (NUDIX hydrolase n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BAA35D6) HSP 1 Score: 57.4 bits (137), Expect = 1.850e-8 Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 4 PARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAIKSHRETTAIRALPPTDTRAPEPAPI 201
P R+LMRD+KAV WLPLA AI +L+R +E+AFL + GP A+ + T + T RAPEP I
Sbjct: 93 PVRKLMRDVKAVEWLPLADAIERLSRGYERAFLENVGPIAMAAQHATPSG-----TVERAPEPVRI 153
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: UPI001BA5D8CE (NUDIX hydrolase n=1 Tax=Bradyrhizobium sp. AUGA SZCCT0169 TaxID=2807663 RepID=UPI001BA5D8CE) HSP 1 Score: 56.2 bits (134), Expect = 5.170e-8 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 4 PARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAIKS 132
P RELMRD+KAV WLPLA AI +L+R +E+AFL + GP A+ +
Sbjct: 93 PVRELMRDVKAVEWLPLADAIERLSRGYERAFLENVGPIALSA 135
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: UPI0009FA92E1 (NUDIX hydrolase n=2 Tax=Bradyrhizobium TaxID=374 RepID=UPI0009FA92E1) HSP 1 Score: 55.1 bits (131), Expect = 1.870e-7 Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 4 PARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAIKSHRETTAIRALPP 168
PA ELMRD+KAV WLPLA A+ +L+R +E+AFL + GP A+ + RA P
Sbjct: 93 PAHELMRDVKAVDWLPLADAVDRLSRGYERAFLENVGPIALAAAAHARKARAKQP 147
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: UPI001BA4ACDA (NUDIX hydrolase n=1 Tax=Bradyrhizobium sp. AUGA SZCCT0182 TaxID=2807667 RepID=UPI001BA4ACDA) HSP 1 Score: 54.7 bits (130), Expect = 1.990e-7 Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 4 PARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAIKSHR 138
P R+LMRD+KAV WLPLA A+ +L+R +E+AFL + GP A+ + R
Sbjct: 93 PVRKLMRDVKAVEWLPLADAVERLSRGYERAFLENVGPIAMAAGR 137
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: UPI001BA8B69B (NUDIX hydrolase n=1 Tax=Bradyrhizobium jicamae TaxID=280332 RepID=UPI001BA8B69B) HSP 1 Score: 53.9 bits (128), Expect = 3.850e-7 Identity = 22/43 (51.16%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 4 PARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAIKS 132
P R+LM D++AV WLPL +A+++L+R HE+AFL + GP A+++
Sbjct: 93 PVRKLMSDVRAVEWLPLERAVKRLSRDHERAFLENVGPIALQA 135
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: UPI00110E555A (NUDIX hydrolase n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI00110E555A) HSP 1 Score: 53.9 bits (128), Expect = 3.960e-7 Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 1
Query: 1 GPARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAIKS 132
GP R+LMRD+KAV WLPL +A+ +L+ +E+AFL + GP A+ S
Sbjct: 92 GPVRKLMRDVKAVDWLPLGQAVARLSHGYERAFLENVGPIALAS 135
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: UPI001FF874F5 (NUDIX hydrolase n=1 Tax=Bradyrhizobium sp. 190 TaxID=2782658 RepID=UPI001FF874F5) HSP 1 Score: 53.5 bits (127), Expect = 4.570e-7 Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 4 PARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAI 126
P RELMRD+KAV WLPL +A+ +L+R +E+AFL GP A+
Sbjct: 87 PVRELMRDVKAVDWLPLGEAVERLSRGYERAFLQHVGPIAL 127
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: UPI000D37C4D5 (NUDIX hydrolase n=1 Tax=Bradyrhizobium algeriense TaxID=634784 RepID=UPI000D37C4D5) HSP 1 Score: 54.3 bits (129), Expect = 5.390e-7 Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 1 GPARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAIKSHRETTAIRALPPTDTRAPEPAP 198
G ELMRD+KAV WLPLA A+ +L+R +E+AFL + GP A+ + R RA +PAP
Sbjct: 92 GAVHELMRDVKAVDWLPLADAVDRLSRDYERAFLENVGPIALSAAAHAATTR-----KARAKQPAP 152
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Match: UPI001BA74831 (NUDIX hydrolase n=6 Tax=Bradyrhizobium TaxID=374 RepID=UPI001BA74831) HSP 1 Score: 53.5 bits (127), Expect = 5.460e-7 Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 1
Query: 4 PARELMRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAI 126
P R+LMRD+KAV WLPLA A+ +L+R +E+AFL + GP A+
Sbjct: 93 PVRKLMRDVKAVEWLPLADAVERLSRGYERAFLENVGPIAM 133 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52244.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52244.1.1 >prot_P-wetherbeei_contig52244.1.1 ID=prot_P-wetherbeei_contig52244.1.1|Name=mRNA_P-wetherbeei_contig52244.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=63bp MRDIKAVAWLPLAKAIRKLARPHEQAFLASAGPAAIKSHRETTAIRALPPback to top mRNA from alignment at P-wetherbeei_contig52244:1..207+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52244.1.1 ID=mRNA_P-wetherbeei_contig52244.1.1|Name=mRNA_P-wetherbeei_contig52244.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig52244:1..207+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52244:1..207+ >mRNA_P-wetherbeei_contig52244.1.1 ID=mRNA_P-wetherbeei_contig52244.1.1|Name=mRNA_P-wetherbeei_contig52244.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=189bp|location=Sequence derived from alignment at P-wetherbeei_contig52244:1..207+ (Phaeothamnion wetherbeei SAG_119_79)back to top |