mRNA_P-wetherbeei_contig52006.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: A0A382U8R9_9ZZZZ (B12-binding domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382U8R9_9ZZZZ) HSP 1 Score: 84.0 bits (206), Expect = 1.040e-17 Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 1 MLIYLADTVHGAGQLNPDTVPYNVARIASYARSRHPEHEYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDR-DRAAYARYSMEHPYVDFVVIEEGE 366
MLIYLAD + N +P NV IA+Y +++HPE +FK+P L+D + N PD+LALSHY WN+ L+ I ++ ++ + + V GGPN + D + E +D + EGE
Sbjct: 1 MLIYLADLCYFHTWDNIQPLPLNVGYIAAYLKNKHPEVSIEIFKDPIKLMDRISNKPPDILALSHYEWNSNLDLAILKHMKQKNVNTITVMGGPNFNAVDLDWIHNFFQERSNLDAYIYGEGE 123
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: A0A2E0D4N8_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E0D4N8_9CHLR) HSP 1 Score: 85.9 bits (211), Expect = 4.380e-17 Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 1 MLIYLADTVHGAGQLNPDTVPYNVARIASYARSRHPEHEYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDR-DRAAYARYSMEHPYVDFVVIEEGE 366
M IYLAD + N +P NV IA+Y +++HPE +FK+P L+D + PDVLALSHY WN+ L+ I ++ +E PD L V GGPN + D + + ++D V EGE
Sbjct: 1 MQIYLADLCYFHDWDNIQPLPLNVGYIAAYLKNKHPEILVEIFKDPKKLMDRISKNPPDVLALSHYNWNSNLDLAILKHMKEKNPDTLTVMGGPNFNGVDFDWIHDFFQKRSHLDAYVYGEGE 123
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: A0A0M9DVW2_9DELT (Radical SAM superfamily protein (Fragment) n=1 Tax=Candidatus Magnetomorum sp. HK-1 TaxID=1509431 RepID=A0A0M9DVW2_9DELT) HSP 1 Score: 83.2 bits (204), Expect = 2.710e-16 Identity = 49/123 (39.84%), Postives = 63/123 (51.22%), Query Frame = 1
Query: 1 MLIYLADTVHGAGQLNPDTVPYNVARIASYARSRH-PEHEYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDRDRAAYARYSMEHPYVDFVVIEEGE 366
M IYLAD V+ Q N VP NVA IA+Y + E + LFK P L ++ PD+L LSHY WNTRLNH + + P + GGPN+ + Y HP +D + EGE
Sbjct: 1 MKIYLADLVYDTVQTNY-VVPLNVAYIAAYLDQIYGDELDITLFKYPKQLEKAIKETPPDILGLSHYSWNTRLNHLFMKLVKHFNPQTHTIMGGPNIRTEPDELKNYLRNHPALDCYIPFEGE 122
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: UPI001BC6A5DB (Cobalamin-dependent protein n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BC6A5DB) HSP 1 Score: 82.8 bits (203), Expect = 5.200e-16 Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = 1
Query: 13 LADTVHGAGQLNPDTVPYNVARIASYARSRHPEH-EYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDRDRAAYARYSMEHPYVDFVVIEEGE 366
+AD V+ + N VP NVA +A+Y + ++ + ++FK P L +++NC PD+L LS+Y WN RLN A+ P ++ V GGPN+ DRA Y + +D+ ++ EGE
Sbjct: 1 MADLVYDTVRTNY-VVPLNVAYLAAYTKEKYGRDVDIKIFKYPLELEKKIKNCPPDILGLSNYSWNERLNQVFMELAKRQNPKVITVMGGPNIRTDRAGIEAYLSVNSLLDYYILFEGE 118
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: A0A3R6ZWN5_9BACT (B12-binding domain-containing protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A3R6ZWN5_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 9.710e-16 Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 7 IYLADTVHGA-GQLNPDTVPYNVARIASYARSR-HPEHEYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDRDRAAYARYSMEHPYVDFVVIEEGE 366
IYL++ +H G+ + + VP N+ +ASY R P + RLF P L L + PD+LA+S+Y WN RLN A YA+ L P+ + + GGPN + + P VDF + +EGE
Sbjct: 8 IYLSNLIHVRDGKYSVEGVPLNIGCLASYLRQEITPSLDLRLFALPEKLEKTLSDEAPDILAVSNYIWNARLNALFAAYAKSLNPETVTIMGGPNFPGSAERRLDFLTKLPQVDFYIPDEGE 129
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: UPI001A900BE7 (cobalamin-dependent protein n=2 Tax=Sneathiella TaxID=510690 RepID=UPI001A900BE7) HSP 1 Score: 79.7 bits (195), Expect = 6.260e-15 Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 7 IYLADTVHGAGQLNPDTVPYNVARIASYARSRHPEH-EYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDRDRAAYARYSMEHPYVDFVVIEEGE 366
IYLAD H L+ + P ++ +A+Y + P+ + LFK P L L PDV+ ++Y WN ++ + AR ++L+P+ ++V GGPN + + +P +DF V++EGE
Sbjct: 6 IYLADLTHNGLVLSSNVFPLSIGLVAAYLLEKKPDGVDVELFKYPEDLSAALDKAVPDVIGFANYSWNMDISRQYARVIKKLWPETVVVFGGPNYGLSDGEVSEFWRNNPNIDFHVVQEGE 126
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: A0A382IZW1_9ZZZZ (B12-binding domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382IZW1_9ZZZZ) HSP 1 Score: 75.1 bits (183), Expect = 1.210e-13 Identity = 42/123 (34.15%), Postives = 67/123 (54.47%), Query Frame = 1
Query: 1 MLIYLADTVHGAGQLNPDTVPYNVARIASYARSRHPEH-EYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDRDRAAYARYSMEHPYVDFVVIEEGE 366
++IYLA H ++ VPYN+A IASY +S+ + E LF N L++ +R P +L LS Y WN L ++ R+ PD + V GGP++ R +Y + ++ +D V ++ GE
Sbjct: 7 LIIYLAHLDH-PNFIHRIAVPYNIACIASYCKSKFGKDIEISLFTNVENLMESMRTKPPHILGLSFYMWNVNLVQQVIECCRQTNPDTITVIGGPSVSRILDSYKKLLSQNRGLDIVSLDHGE 128
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: A0A0J6YZ86_9BACT (B12-binding domain-containing protein n=1 Tax=Candidatus Nitromaritima sp. SCGC AAA799-A02 TaxID=1628278 RepID=A0A0J6YZ86_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 1.400e-13 Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 1
Query: 7 IYLADTVHGAGQLNPDTVPYNVARIASYARSR-HPEHEYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDRDRAAYARYSMEHPYVDFVVIEEGE 366
I +AD H ++ T P +ASYA+ E +LFK P + P V+A S++ WN LN++I A+E+YP+I+ + GGPN + +Y + +DF + EEGE
Sbjct: 4 ILIADLTHLGQGIHAPTFPLGAGCVASYAQEALKSEFNIKLFKFPEPFFKAILEESPVVIAFSNFSWNKNLNYKICSLAKEIYPNIVTIFGGPNFPTSQKEKFQYLNSYSNIDFYIQEEGE 124
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: A0A3R7S9Z9_9PROT (Radical SAM protein n=2 Tax=Pelagibacteraceae TaxID=1655514 RepID=A0A3R7S9Z9_9PROT) HSP 1 Score: 74.3 bits (181), Expect = 4.850e-13 Identity = 37/108 (34.26%), Postives = 62/108 (57.41%), Query Frame = 1
Query: 43 LNPDTVPYNVARIASYARSRHPEHEYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDRDRAAYARYSMEHPYVDFVVIEEGE 366
L+ VP +A++A+ +PE ++K ++E++ PDVL L++Y WN L RIA+ A+++ P ILIV GGP +D+ A + + ++ DF + EGE
Sbjct: 26 LSTPVVPLGAGXVAAHAKXXNPEIXVSVYKGITPXIEEIKKXPPDVLGLTNYVWNNNLAIRIAKVAKKINPKILIVFGGPEIDKSPANKSIMNDKYKIADFFIQYEGE 133
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Match: UPI00146F2E63 (cobalamin-dependent protein n=1 Tax=Sneathiella aquimaris TaxID=2599305 RepID=UPI00146F2E63) HSP 1 Score: 73.9 bits (180), Expect = 6.600e-13 Identity = 40/121 (33.06%), Postives = 61/121 (50.41%), Query Frame = 1
Query: 7 IYLADTVHGAGQLNPDTVPYNVARIASYARSRHPEH-EYRLFKNPHILLDELRNCRPDVLALSHYFWNTRLNHRIARYARELYPDILIVTGGPNLDRDRAAYARYSMEHPYVDFVVIEEGE 366
IYLAD H L+ + P ++ + +Y R P+ LFK P L L PD++ ++Y WN L + A+ ++L+P+ +IV GGPN A + +P +DF V EGE
Sbjct: 6 IYLADLTHNGLVLSSNVFPLSIGLVGAYLLDRKPDEVSLELFKYPEDLSQALETEVPDIVGFANYSWNYDLARQYAKTIKKLWPETVIVFGGPNYGLTDEEIAAFWKRNPDIDFHVAREGE 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52006.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52006.1.1 >prot_P-wetherbeei_contig52006.1.1 ID=prot_P-wetherbeei_contig52006.1.1|Name=mRNA_P-wetherbeei_contig52006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp MLIYLADTVHGAGQLNPDTVPYNVARIASYARSRHPEHEYRLFKNPHILLback to top mRNA from alignment at P-wetherbeei_contig52006:184..549+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52006.1.1 ID=mRNA_P-wetherbeei_contig52006.1.1|Name=mRNA_P-wetherbeei_contig52006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig52006:184..549+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52006:184..549+ >mRNA_P-wetherbeei_contig52006.1.1 ID=mRNA_P-wetherbeei_contig52006.1.1|Name=mRNA_P-wetherbeei_contig52006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig52006:184..549+ (Phaeothamnion wetherbeei SAG_119_79)back to top |