mRNA_P-wetherbeei_contig51811.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: A0A127EYQ1_9HYPH (Uncharacterized protein n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EYQ1_9HYPH) HSP 1 Score: 223 bits (567), Expect = 3.370e-68 Identity = 110/142 (77.46%), Postives = 129/142 (90.85%), Query Frame = 1
Query: 52 MICTPFFIMLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIYEIEGDLRILLALVLNVIVLGTQIDG 477
M+C PF+IMLGLM++EA+L+A TT+LVI GRDVA G F+IGDL+ ILA++S +YIVGASSW++AER G+LAYGRY+LRFARDNR +TKLLGDKDARERVEPFLTGETF VYFHL+YEIEGDLRILLAL+LN IVLGTQID
Sbjct: 1 MLCGPFYIMLGLMTVEASLHAVTTFLVIEAGRDVARGHFVIGDLLTILASESAAYIVGASSWIFAERTGFLAYGRYVLRFARDNREKTKLLGDKDARERVEPFLTGETFYVYFHLLYEIEGDLRILLALILNAIVLGTQIDA 142
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: A0A1H0VSC2_9BURK (ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain n=1 Tax=Rhodoferax sp. OV413 TaxID=1855285 RepID=A0A1H0VSC2_9BURK) HSP 1 Score: 168 bits (425), Expect = 5.840e-47 Identity = 84/159 (52.83%), Postives = 112/159 (70.44%), Query Frame = 1
Query: 10 STRIAISPFQ---LAKLMICTPFFIMLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIYEIEGDLRILLALVLNVIVLGTQIDG 477
S+R A+ P++ + M+C P F ML + EAAL ATTT+L+I RDV + F++ D WI+ QS SY++GASSW++AERAG+ A+GRYMLRFARDNRH+ LL DK RE+VEPFLT E F ++F L+YE+E DL++L L+ N VLG ID
Sbjct: 9 SSRPALPPYRNRDFLRFMLCPPLFWMLLFLVAEAALAATTTWLIIDASRDVVDKVFLVSDFAWIVGVQSASYVLGASSWIFAERAGFGAFGRYMLRFARDNRHQAALLADKAQREQVEPFLTNEAFHIFFELVYELEADLKLLFGLLFNAAVLGVAIDA 167
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: UPI001BCED3CF (hypothetical protein n=1 Tax=Variovorax sp. PCZ-1 TaxID=2835533 RepID=UPI001BCED3CF) HSP 1 Score: 167 bits (422), Expect = 1.610e-46 Identity = 85/138 (61.59%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 64 PFFIMLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIYEIEGDLRILLALVLNVIVLGTQIDG 477
PF+ ML L+ IEA L A TT L+I G DV++ F+I D WI+AAQS SYIVGASSW++AERAG+ AYGRYMLRFARDNR LLGD+ RE VEPFLT ETF + F LIYE+E DL++ L+ N IVLG ID
Sbjct: 25 PFYWMLALLIIEAGLAAATTALIIQAGHDVSQQEFLISDFAWIVAAQSASYIVGASSWIFAERAGFGAYGRYMLRFARDNRATAALLGDRQQREHVEPFLTNETFHILFELIYELEADLKLFFGLLFNAIVLGFAIDA 162
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: J5PP17_9RHOB (Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J5PP17_9RHOB) HSP 1 Score: 160 bits (406), Expect = 3.410e-44 Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 1
Query: 7 TSTRIAISPFQLAKLMICTPFFIMLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIYEIEGDLRILLALVLNVIVLGTQIDG 477
T R I+ L ++C + M+ LM +EA L+A TT+L+I GRDVA F++ DL+WI+ QS +Y+ GA SW +AERAG+ AYGRYMLRFARDNR +LL DK ARE+VEPFL G TF F+L+YE+E +L++ L L+ N IVLG +ID
Sbjct: 2 TPPRKTITRLTLVGYLLCPQLYAMITLMVVEALLSAVTTWLIIQAGRDVATDAFVVSDLVWIVVTQSAAYVAGAVSWYFAERAGFRAYGRYMLRFARDNRGGARLLADKAAREQVEPFLAGTTFVNIFNLMYEVEAELKLALGLLFNGIVLGLEIDA 158
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: A0A1Q7BF01_9PROT (AAA family ATPase n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BF01_9PROT) HSP 1 Score: 156 bits (394), Expect = 2.350e-42 Identity = 83/156 (53.21%), Postives = 106/156 (67.95%), Query Frame = 1
Query: 10 STRIAISPFQLAKLMICTPFFIMLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIYEIEGDLRILLALVLNVIVLGTQIDG 477
+ R I+ +Q ++C P ++M+ LM EA L A TT+L+I GR VA F DL+WI AQS SYI GA SW +AERAG+ A+GR+ML+FARDNR T+LL DK ARE+VEPFLT TF F+ +YEIE L++LL L+ N IVLG ID
Sbjct: 15 TARRPITRWQFVSYLLCRPLYVMITLMVTEALLAALTTWLIIRAGRAVANEDFQARDLIWIFVAQSASYIAGALSWYFAERAGFHAFGRFMLQFARDNRGYTRLLSDKQAREQVEPFLTSTTFNNIFNFMYEIEDQLKLLLGLIFNSIVLGVAIDA 170
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: A0A7Y0GFR3_9BURK (AAA family ATPase n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A7Y0GFR3_9BURK) HSP 1 Score: 144 bits (364), Expect = 4.350e-38 Identity = 70/119 (58.82%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 46 KLMICTPFFIMLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIY 402
+ ++C PF+ ML L+ +EAA L+IA GRDVAE F+I D +WI+ AQS SY++GA SW++AERAG+ AYGRYMLRFARDNRH LL DK RER EPFLT ETF ++F L Y
Sbjct: 17 RFLLCAPFYWMLALLVVEAAXXXXXXALIIAAGRDVAEQDFLISDFVWIVVAQSASYVLGAVSWIFAERAGFGAYGRYMLRFARDNRHSPALLTDKGERERAEPFLTNETFHIFFELTY 135
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: A0A1G8NCD0_9RHOO (AAA ATPase domain-containing protein n=1 Tax=Propionivibrio dicarboxylicus TaxID=83767 RepID=A0A1G8NCD0_9RHOO) HSP 1 Score: 123 bits (308), Expect = 4.810e-30 Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 1
Query: 76 MLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIYEIEGDLRILLALVLNVIVLGTQIDG 477
ML ++ ++ + A TT+LVI R++AE + +L WI+AAQ+ +Y+ GA SW++AERAG+ AY RYMLRFAR NRH T LLGD +ARE EPFLT E F+V F N +VLG +IDG
Sbjct: 24 MLMMILLQESCGAATTWLVIVIAREIAEATVSVSNLAWIVAAQTIAYLAGAVSWIFAERAGFGAYARYMLRFARLNRHRTPLLGDTEAREETEPFLTSEAFQVLFXXXXXXXXXXXXXXXXXXNALVLGIEIDG 157
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: UPI00123D684E (ABC transporter ATP-binding protein/permease n=1 Tax=Dechloromonas sp. CZR5 TaxID=2608630 RepID=UPI00123D684E) HSP 1 Score: 117 bits (292), Expect = 8.920e-28 Identity = 61/134 (45.52%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 76 MLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIYEIEGDLRILLALVLNVIVLGTQIDG 477
ML L+ ++ A TT+LVI RD+ E GD +WI+ AQ+ SY+ GA+SW+YAER G+ A+G+Y+L FAR NR T LLGD ARE EPFLT E+F V F L+ VLG +ID
Sbjct: 24 MLFLVMLQELFGAGTTWLVIRVARDITEAHVTAGDFVWIVVAQTCSYLAGAASWIYAERTGFTAFGKYLLHFARSNRFRTALLGDAQARESTEPFLTNESFRVCFDLMXXXXXXXXXXXXXXXXATVLGMEIDA 157
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: UPI0005AA47C0 (ABC transporter ATP-binding protein n=1 Tax=Comamonas granuli TaxID=290309 RepID=UPI0005AA47C0) HSP 1 Score: 116 bits (291), Expect = 1.300e-27 Identity = 62/134 (46.27%), Postives = 83/134 (61.94%), Query Frame = 1
Query: 76 MLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIYEIEGDLRILLALVLNVIVLGTQIDG 477
M+ L+ ++ A A T+ VIA RD+A+G + L + A QS SY+ GA+SW + ERAG+ AY RY+ F R NR T LL D ARE EPFLTGE F++ F L+Y+I+ DLR+ +V N V G ID
Sbjct: 28 MVLLVLLQEAAGAVATWWVIAIARDIADGHLGLRALAELAAIQSASYLAGAASWFFVERAGFAAYARYLQFFVRANRGRTDLLSDAQARESTEPFLTGEAFQISFSLVYDIQYDLRLFANVVFNAAVFGWAIDA 161
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Match: A0A524BDK8_9RHOO (AAA family ATPase n=2 Tax=Rhodocyclales TaxID=206389 RepID=A0A524BDK8_9RHOO) HSP 1 Score: 112 bits (279), Expect = 6.190e-26 Identity = 62/137 (45.26%), Postives = 80/137 (58.39%), Query Frame = 1
Query: 67 FFIMLGLMSIEAALNATTTYLVIATGRDVAEGRFIIGDLMWILAAQSTSYIVGASSWLYAERAGYLAYGRYMLRFARDNRHETKLLGDKDARERVEPFLTGETFEVYFHLIYEIEGDLRILLALVLNVIVLGTQIDG 477
FF MLGL+ ++ L A TT+LVI R + +G+ WI+ Q+ SY GA SWLYAERAG+ A+G+Y+L+FAR NR +T LL D + RE EPFLT ETF V F L+ IV G +ID
Sbjct: 20 FFAMLGLIVLQELLGAATTWLVIRLARGMVDGQVEASAFGWIVVTQTLSYAAGAVSWLYAERAGFSAFGKYLLQFARLNRFQTALLADTEVREGTEPFLTNETFRVCFDLMXXXXXXXXXXXXXXXXXIVFGIEIDA 156 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51811.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51811.1.1 >prot_P-wetherbeei_contig51811.1.1 ID=prot_P-wetherbeei_contig51811.1.1|Name=mRNA_P-wetherbeei_contig51811.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp MTTSTRIAISPFQLAKLMICTPFFIMLGLMSIEAALNATTTYLVIATGRDback to top mRNA from alignment at P-wetherbeei_contig51811:74..550+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51811.1.1 ID=mRNA_P-wetherbeei_contig51811.1.1|Name=mRNA_P-wetherbeei_contig51811.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig51811:74..550+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51811:74..550+ >mRNA_P-wetherbeei_contig51811.1.1 ID=mRNA_P-wetherbeei_contig51811.1.1|Name=mRNA_P-wetherbeei_contig51811.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig51811:74..550+ (Phaeothamnion wetherbeei SAG_119_79)back to top |