mRNA_P-wetherbeei_contig51677.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51677.1.1 vs. uniprot
Match: A0A327MCB4_9PROT (MBL fold metallo-hydrolase n=1 Tax=Roseicella frigidaeris TaxID=2230885 RepID=A0A327MCB4_9PROT) HSP 1 Score: 57.0 bits (136), Expect = 7.030e-8 Identity = 31/69 (44.93%), Postives = 37/69 (53.62%), Query Frame = 1
Query: 16 VTVMAGILTHAHPVQWDEHGARALPKDIPLIRANFGGREIIKAARFTDVRVLMGTPIVEGVKTSDTPGQ 222
V V A I+TH H WD ALPK IPL + I+AA FTDVRVL + G+ + TPGQ
Sbjct: 58 VDVDAVIVTHTHLDHWDAAARDALPKAIPLFAQDETDAAAIRAAGFTDVRVLAAATVFGGITLAKTPGQ 126
BLAST of mRNA_P-wetherbeei_contig51677.1.1 vs. uniprot
Match: UPI001F0D6B56 (MBL fold metallo-hydrolase n=1 Tax=Alcaligenes xylosoxydans xylosoxydans TaxID=85698 RepID=UPI001F0D6B56) HSP 1 Score: 55.5 bits (132), Expect = 1.400e-7 Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 22 VMAGILTHAHPVQWDEHGARALPKDIPLIRANFGGREIIKAARFTDVRVLMGTPIVEGVKTSDTPG 219
V A ++TH H WDE AR++PK++P+ + I++ FTDVRVL G+ + GV S T G
Sbjct: 83 VDAVVVTHTHEDHWDETAARSIPKNLPVYVQHQADAAKIRSQGFTDVRVLNGSAVFNGVTISKTGG 148
BLAST of mRNA_P-wetherbeei_contig51677.1.1 vs. uniprot
Match: A0A4R5QKI8_9PROT (MBL fold metallo-hydrolase n=2 Tax=Dankookia rubra TaxID=1442381 RepID=A0A4R5QKI8_9PROT) HSP 1 Score: 55.8 bits (133), Expect = 1.860e-7 Identity = 30/69 (43.48%), Postives = 37/69 (53.62%), Query Frame = 1
Query: 16 VTVMAGILTHAHPVQWDEHGARALPKDIPLIRANFGGREIIKAARFTDVRVLMGTPIVEGVKTSDTPGQ 222
+ V A I+TH H WD+ +LPK +PL N I+AA FTDVRVL GV + TPGQ
Sbjct: 58 IDVDAVIVTHTHLDHWDDTAKASLPKGLPLFAQNEKDATAIRAAGFTDVRVLSAETGFGGVTLAKTPGQ 126
BLAST of mRNA_P-wetherbeei_contig51677.1.1 vs. uniprot
Match: D4DMH6_NEIEG (Lactamase_B domain-containing protein n=44 Tax=Proteobacteria TaxID=1224 RepID=D4DMH6_NEIEG) HSP 1 Score: 55.8 bits (133), Expect = 2.110e-7 Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 22 VMAGILTHAHPVQWDEHGARALPKDIPLIRANFGGREIIKAARFTDVRVLMGTPIVEGVKTSDTPG 219
V A I+TH H WDE AR++PK++P+ + I++ FTDVRVL G+ + GV S T G
Sbjct: 83 VDAVIVTHTHEDHWDETAARSIPKNLPVYVQHQADAAKIRSQGFTDVRVLNGSAVFNGVTISKTGG 148
BLAST of mRNA_P-wetherbeei_contig51677.1.1 vs. uniprot
Match: A1KU27_NEIMF (Lactamase_B domain-containing protein n=10 Tax=Neisseria meningitidis TaxID=487 RepID=A1KU27_NEIMF) HSP 1 Score: 52.8 bits (125), Expect = 1.280e-6 Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 1
Query: 28 AGILTHAHPVQWDEHGARALPKDIPLIRANFGGREIIKAARFTDVRVLMGTPIVEGVKTSDTPG 219
A I+TH H W E AR++PK++P+ + I++ FTDVRVL G+ + GV S T G
Sbjct: 3 AVIVTHTHEDHWGETAARSIPKNLPVYVQHQADAAKIRSQGFTDVRVLNGSTVFNGVTISKTGG 66
BLAST of mRNA_P-wetherbeei_contig51677.1.1 vs. uniprot
Match: E0SCZ4_DICD3 (ABC transporter permease protein yddR n=17 Tax=Dickeya TaxID=204037 RepID=E0SCZ4_DICD3) HSP 1 Score: 51.6 bits (122), Expect = 6.720e-6 Identity = 27/67 (40.30%), Postives = 36/67 (53.73%), Query Frame = 1
Query: 22 VMAGILTHAHPVQWDEHGARALPKDIPLIRANFGGREIIKAARFTDVRVLMGTPIVEGVKTSDTPGQ 222
V A I+TH H WDE LPK +P+ + RE I+AA F+DVR+L + + TPGQ
Sbjct: 70 VDAVIVTHTHLDHWDEAAEIHLPKSLPIFAQHEQDRETIRAAGFSDVRLLTEQSVFGDIMLIKTPGQ 136
BLAST of mRNA_P-wetherbeei_contig51677.1.1 vs. uniprot
Match: UPI001CC1B239 (MBL fold metallo-hydrolase n=1 Tax=Planococcus sp. 4-30 TaxID=2874583 RepID=UPI001CC1B239) HSP 1 Score: 51.2 bits (121), Expect = 8.780e-6 Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 1
Query: 28 AGILTHAHPVQWDEHGARALPKDIPLIRANFGGREIIKAARFTDVRVLMGTPIVEGVKTSDTPGQ 222
A I+TH H WD+ ALPK+I L N + ++ A FT+V VL G + EG++ T G+
Sbjct: 62 AVIVTHLHLDHWDDAAKEALPKEIKLFTQNEEDAKEVQKAGFTNVEVLQGDTVFEGIQLIKTKGE 126
BLAST of mRNA_P-wetherbeei_contig51677.1.1 vs. uniprot
Match: A0A4Q0ZLM1_9PROT (Lactamase_B domain-containing protein n=1 Tax=Arcobacter sp. CECT 8985 TaxID=1935424 RepID=A0A4Q0ZLM1_9PROT) HSP 1 Score: 49.3 bits (116), Expect = 4.430e-5 Identity = 26/67 (38.81%), Postives = 37/67 (55.22%), Query Frame = 1
Query: 22 VMAGILTHAHPVQWDEHGARALPKDIPLIRANFGGREIIKAARFTDVRVLMGTPIVEGVKTSDTPGQ 222
V A I+TH HP D+ + +PK++ L N + IK FT++R+L G I EG+ S T GQ
Sbjct: 60 VDAIIITHTHPDHIDDAAFKLIPKNMLLFVQNEQDKVFIKEKGFTNIRILDGNTIFEGINISITKGQ 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51677.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51677.1.1 >prot_P-wetherbeei_contig51677.1.1 ID=prot_P-wetherbeei_contig51677.1.1|Name=mRNA_P-wetherbeei_contig51677.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp MAGILTHAHPVQWDEHGARALPKDIPLIRANFGGREIIKAARFTDVRVLMback to top mRNA from alignment at P-wetherbeei_contig51677:13..234+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51677.1.1 ID=mRNA_P-wetherbeei_contig51677.1.1|Name=mRNA_P-wetherbeei_contig51677.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=222bp|location=Sequence derived from alignment at P-wetherbeei_contig51677:13..234+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51677:13..234+ >mRNA_P-wetherbeei_contig51677.1.1 ID=mRNA_P-wetherbeei_contig51677.1.1|Name=mRNA_P-wetherbeei_contig51677.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig51677:13..234+ (Phaeothamnion wetherbeei SAG_119_79)back to top |