mRNA_P-wetherbeei_contig5158.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5158.1.1
Unique NamemRNA_P-wetherbeei_contig5158.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: D8LMW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMW0_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 6.890e-94
Identity = 157/242 (64.88%), Postives = 188/242 (77.69%), Query Frame = 1
Query:    1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAA---GGPAVYRSTAQVQS 717
            + GASGISAW+FVHP DV+KVRMQL +G +G P     AAA+ V    G+ G+Y+GL+A +TRQAVYTTLR+GL+D  ++       ++ ++  L RA +GL AGGIASFM CPIEVC+VRMQ+D RLP A+R GYKHIGDAL R+AKEEGVRTYWRGATPTV+RAMVVSMTQLGTYDQAKT+L P+LGD+   HL+SAL AAVVYS ASLPLD+AKTRMQ+ AA   G P  Y ST Q  S
Sbjct:   21 VAGASGISAWMFVHPMDVLKVRMQLGAG-AGHP----MAAAKLVYGESGLRGMYAGLSAAVTRQAVYTTLRVGLYDWIRDHAVHKFVKQEDINVLHRAAVGLTAGGIASFMCCPIEVCMVRMQSDARLPQADRLGYKHIGDALFRIAKEEGVRTYWRGATPTVSRAMVVSMTQLGTYDQAKTVLLPILGDNKGLHLASALTAAVVYSYASLPLDSAKTRMQSQAASTDGKPLKYTSTLQTLS 257          
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A835Z4J2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J2_9STRA)

HSP 1 Score: 275 bits (702), Expect = 3.030e-89
Identity = 159/243 (65.43%), Postives = 179/243 (73.66%), Query Frame = 1
Query:    1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAA---GGPAVYRSTAQVQSA 720
            + GASGISAW+F+HPAD+IKVRMQL+ G SG    +A  A   + +  GV GLY+GL+A ITRQAVYTT RLGL+D  K A A   P   E+T L R   GLAAGGIA+F+TCPIEVCLVRMQADGRLPPAERRGY ++ +AL RVAKEEGV TYWRGA+PTVARAMVVS TQLGTYDQ KT L P+LGD AA    +AL AAVVYS ASLPLDTAKTRMQ  A    G P  Y    Q   A
Sbjct:   16 VAGASGISAWMFIHPADLIKVRMQLL-GNSGAKT-TASMAFNEIRRTQGVKGLYAGLSAAITRQAVYTTARLGLYDIIKAAIA---PPGTEVTVLHRLTTGLAAGGIAAFLTCPIEVCLVRMQADGRLPPAERRGYTNVFNALGRVAKEEGVLTYWRGASPTVARAMVVSATQLGTYDQVKTSLLPILGDGAATQTVAALTAAVVYSYASLPLDTAKTRMQGQARARDGAPLKYTGMLQTVGA 253          
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A4D9CTP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTP4_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.070e-80
Identity = 144/238 (60.50%), Postives = 166/238 (69.75%), Query Frame = 1
Query:   10 ASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAK-TMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAA----GGPAVYRSTAQ 708
            ASG+S WL VHPADV+KVRMQL     G         A+ +IK +G  GLYSGL+A I RQ  YTT+RLG FD+ K   A    Q+  LT   R+   + AG  ASF+ CP+EVCLVRMQADG+LPP +RRGYKH+GDAL+RVA+EEGV TYWRGA PTV RAMVVS TQLGTYDQAK T     L D  + HL S+L A +VYSLASLPLDTAKTRMQ+ AA    GG   YRST Q
Sbjct:   38 ASGVSGWLIVHPADVVKVRMQLAGKAGG----GMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALT---RSMSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQ 268          
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: W7TLF9_9STRA (Mitochondrial 2-oxoglutarate malate carrier protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLF9_9STRA)

HSP 1 Score: 223 bits (568), Expect = 8.140e-69
Identity = 131/222 (59.01%), Postives = 152/222 (68.47%), Query Frame = 1
Query:   58 KVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAK-TMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAA----GGPAVYRSTAQ 708
            +VRMQL     G         A+ +IK +G  GLYSGL+A I RQ  YTT+RLG FD+ K   A    Q+  LT   R+   + AG  ASF+ CP+EVCLVRMQADG+LPP +RRGYKH+GDAL+RVA+EEGV TYWRGA PTV RAMVVS TQLGTYDQAK T     L D  + HL S+L A +VYSLASLPLDTAKTRMQ+ AA    GG   YRST Q
Sbjct:   50 QVRMQLAGKAGG----GMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALT---RSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQ 264          
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A7S1JD16_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JD16_9EUGL)

HSP 1 Score: 213 bits (541), Expect = 5.610e-65
Identity = 126/240 (52.50%), Postives = 155/240 (64.58%), Query Frame = 1
Query:    7 GASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTML--TPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAA-AGGPAVYRSTAQVQS 717
            GA GI+ W+FVHP DV+K RMQL+   SG       + A G++K +G  GLYSGL+A + RQ  YTT RLGL+   ++     G Q    T   R   G+ AG IAS +  PIEVCLVRMQ+DGRLP AE+R YKHI DAL RVA+EEG+ TYWRG TPTV RA+VVS+TQ+  YDQ K  L  +    D+   HLSS+++A  +YS ASLP DT KTRMQ      G  +Y STAQ  S
Sbjct:   14 GAGGITGWMFVHPMDVLKTRMQLLG--SGGKNTGVVSLASGILKNEGAKGLYSGLSAAMMRQVTYTTARLGLYGSLRDLIVKPGQQA---TLGQRVLAGVGAGAIASSVCNPIEVCLVRMQSDGRLPKAEQRNYKHIFDALGRVAREEGILTYWRGCTPTVVRAIVVSVTQVAGYDQIKASLLNSGWFQDNMYCHLSSSVLAGFIYSAASLPFDTTKTRMQTQKPVDGKLLYTSTAQTMS 248          
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A0G4GW21_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GW21_VITBC)

HSP 1 Score: 207 bits (527), Expect = 1.060e-62
Identity = 123/226 (54.42%), Postives = 154/226 (68.14%), Query Frame = 1
Query:    1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVP--PPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTML---TPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQ 663
            L+G++GI  WL VHP DV+K+RMQL +   G      S  A A+ + K +G+ GLYSGL+AGITRQA YTTLR GL+   ++     G      T   + G GL +G IAS + CP+EV LVRMQADGRLP AERRGY ++ +AL R+AKEEG+ T WRG+TPTVARAMVV+M Q G+YDQAK +L   TP+ G     H S++LI+   YS ASLP D AKTRMQ
Sbjct:   20 LSGSAGILGWLPVHPFDVLKIRMQLNAEGGGTKLYKNSVDAVAK-IFKTEGLWGLYSGLSAGITRQATYTTLRGGLYQILRDRYTVPGANP---TVAVKLGCGLTSGAIASVVCCPVEVSLVRMQADGRLPVAERRGYTNVFNALYRIAKEEGILTCWRGSTPTVARAMVVNMVQFGSYDQAKEVLMAMTPLKGVGL--HFSASLISGFTYSAASLPFDIAKTRMQ 239          
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A7S2TXY1_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2TXY1_9EUKA)

HSP 1 Score: 206 bits (525), Expect = 1.730e-62
Identity = 114/223 (51.12%), Postives = 146/223 (65.47%), Query Frame = 1
Query:    1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTP--VLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQ 663
            ++G +G+S W+FVHP DV+KVRMQ+     G     A A    + K +G+ GLYSGL+A +TRQ  YTTLRLGL+D  ++  +     + ++    + G GLAAG  A+ + CP+EV LVRMQADG  P A+RR YKHI DA+MRV  EEG+ T WRG  PTV R  VVS TQL TYDQAK+ML    +L +    HL+S+LI+  VY   SLPLD  KTRMQ
Sbjct:   18 ISGFAGVSGWMFVHPFDVLKVRMQVNKSKVG-----ALATLMNIHKQEGITGLYSGLSAAVTRQLTYTTLRLGLYDVIRDKLS---EGRSDIPFYLKLGTGLAAGATAATICCPVEVSLVRMQADGNRPLADRRNYKHIFDAMMRVTAEEGITTLWRGVVPTVFRGAVVSTTQLATYDQAKSMLKSFNILNEGVGLHLASSLISGFVYCFTSLPLDICKTRMQ 232          
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A7S4GIE6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GIE6_9EUGL)

HSP 1 Score: 201 bits (512), Expect = 6.260e-61
Identity = 113/207 (54.59%), Postives = 141/207 (68.12%), Query Frame = 1
Query:   49 DVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKT--MLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQ 663
            DV+K RMQ++  T      S  A A  ++K +G+ GLYSGL+A I RQ  YTT RLGL+   ++      P  R  T + R G  +AAG  A+ +  P+EVCLVRMQADGRLPPAE+RGYKH+GDALMRVA+EEGV TYWRG TPTV RA+VVS+TQ+  YDQ K   + T    D+   HL+S++ A  +YSLASLP DT KTRMQ
Sbjct:    2 DVMKTRMQILGQTGETM--STGALANSIVKKEGIPGLYSGLSAAILRQITYTTTRLGLYGTIRDVIT---PVDRPATVVHRVGAAVAAGAAAACVCNPVEVCLVRMQADGRLPPAEQRGYKHVGDALMRVAREEGVLTYWRGCTPTVVRAIVVSVTQVAGYDQIKAGFLSTGYFQDNIFCHLTSSVAAGFIYSLASLPFDTTKTRMQ 203          
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A2V3IHJ8_9FLOR (Mitochondrial 2-oxoglutarate/malate carrier protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHJ8_9FLOR)

HSP 1 Score: 201 bits (512), Expect = 1.610e-60
Identity = 110/224 (49.11%), Postives = 154/224 (68.75%), Query Frame = 1
Query:    7 GASGISAWLFVHPADVIKVRMQLMS-GTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTP----VLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQ 663
            G +G+ +WL +HPADVIKVRMQ+   GT+  P      AAR + K +GV  +YSGL+A +TRQ  YTTLRLGL+  F++A      ++  ++   + GIG+AAGGIAS +  P+E+ +VRM +DG    ++RRGY++I DAL R+A+EEGVR  WRGATPTVAR+MVV+  QLGTYDQAK + +     VL D    H +++  +   YS+ +LP+D+AKTR+Q
Sbjct:   22 GTAGVLSWLLIHPADVIKVRMQIAGEGTTETPYRGFLHAARMISKTEGVKAMYSGLSAALTRQVTYTTLRLGLYSTFRDAYM---KERSSISTGAKFGIGMAAGGIASAIATPVELSMVRMYSDGAAEASKRRGYRNIFDALWRIAREEGVRGLWRGATPTVARSMVVNCVQLGTYDQAKEVFSGLGIGVLQDGVPLHFAASTTSGFCYSVVTLPIDSAKTRLQ 242          
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: D7G058_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G058_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.130e-59
Identity = 111/238 (46.64%), Postives = 156/238 (65.55%), Query Frame = 1
Query:    1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLD----RAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAAGGPAVYRST 702
            + GASG+SAW+F+HPAD+IK RMQL+  +      +A +  + ++K +GV  LY+GL+A + RQA YTTLRLGL+D  +  R     +  ++ G+     R  IG  +GG+ASF +CPIEVCLVRMQADG+LP  ++RGY+ +  AL R+A++EG   YWRG   TV RAMVVS++Q+ TYDQAK  L P +      HL + +I+A+ ++  S+P DT KTR+Q   AG    Y  T
Sbjct:   41 VAGASGMSAWVFIHPADLIKTRMQLLGDSKK--GATAVSVGKDLVKNEGVTALYAGLSAALARQASYTTLRLGLYDLLR--RLVLDSRTSDMNGVQLLLLRILIGAVSGGMASFCSCPIEVCLVRMQADGKLPKDQQRGYRGVFHALYRIARDEGALAYWRGGGTTVLRAMVVSVSQIATYDQAKASLAPYV-QGFRQHLVAGVISALTFTTISMPFDTVKTRVQQEKAGSKPRYTGT 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMW0_ECTSI6.890e-9464.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z4J2_9STRA3.030e-8965.43Mitochondrial carrier domain-containing protein n=... [more]
A0A4D9CTP4_9STRA1.070e-8060.50Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TLF9_9STRA8.140e-6959.01Mitochondrial 2-oxoglutarate malate carrier protei... [more]
A0A7S1JD16_9EUGL5.610e-6552.50Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A0G4GW21_VITBC1.060e-6254.42Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2TXY1_9EUKA1.730e-6251.12Hypothetical protein n=2 Tax=Lotharella TaxID=7481... [more]
A0A7S4GIE6_9EUGL6.260e-6154.59Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A2V3IHJ8_9FLOR1.610e-6049.11Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
D7G058_ECTSI1.130e-5946.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5158contigP-wetherbeei_contig5158:135..2269 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LMW0
PFAMsMito_carr
Model size732
Max annot lvl2759|Eukaryota
KEGG koko:K15104
KEGG TC2.A.29.2.1,2.A.29.2.9
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.13e-94
EggNOG OGsKOG0759@1|root,KOG0759@2759|Eukaryota
Ec32 ortholog descriptionMitochondrial substrate/solute carrier
Ec32 orthologEc-02_003840.1
Descriptionthiosulfate transmembrane transporter activity
Cds size732
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5158.1.1prot_P-wetherbeei_contig5158.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5158 135..2269 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186774.7411761-CDS-P-wetherbeei_contig5158:134..2711683186774.7411761-CDS-P-wetherbeei_contig5158:134..271Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5158 135..271 -
1683186774.7648401-CDS-P-wetherbeei_contig5158:642..7501683186774.7648401-CDS-P-wetherbeei_contig5158:642..750Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5158 643..750 -
1683186774.7760713-CDS-P-wetherbeei_contig5158:976..10941683186774.7760713-CDS-P-wetherbeei_contig5158:976..1094Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5158 977..1094 -
1683186774.7889276-CDS-P-wetherbeei_contig5158:1402..15021683186774.7889276-CDS-P-wetherbeei_contig5158:1402..1502Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5158 1403..1502 -
1683186774.80084-CDS-P-wetherbeei_contig5158:1817..20261683186774.80084-CDS-P-wetherbeei_contig5158:1817..2026Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5158 1818..2026 -
1683186774.8091948-CDS-P-wetherbeei_contig5158:2209..22691683186774.8091948-CDS-P-wetherbeei_contig5158:2209..2269Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5158 2210..2269 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5158.1.1

>prot_P-wetherbeei_contig5158.1.1 ID=prot_P-wetherbeei_contig5158.1.1|Name=mRNA_P-wetherbeei_contig5158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=244bp
LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGV
GGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGI
GLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEE
GVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTPVLGDSAANHLSSAL
IAAVVYSLASLPLDTAKTRMQAAAAGGPAVYRSTAQVQSAADD*
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mRNA from alignment at P-wetherbeei_contig5158:135..2269-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5158.1.1 ID=mRNA_P-wetherbeei_contig5158.1.1|Name=mRNA_P-wetherbeei_contig5158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2135bp|location=Sequence derived from alignment at P-wetherbeei_contig5158:135..2269- (Phaeothamnion wetherbeei SAG_119_79)
TTGACAGGGGCATCGGGCATAAGCGCCTGGCTCTTCGTCCACCCCGCAGA TGTGATCAAGGTGTGCGTTCGCGCATTGCGTCCTGCCATTCGAGCTAGGA TCGACAAAAAGGGTCTCCTCTCCCTTTTTCGCCTACCTTCAATTGTACTT GCTATCAGCACCAATCCCTCGCGCACACCCCACATTCTCACGCGTCCGTT TCGCGTATCCCGACCCCTAGTCTACCCGCTCAGCCCAAAACAGGTTCGGA TGCAGCTCATGAGCGGCACCTCCGGCGTGCCGCCGCCGAGCGCCTTCGCC GCCGCTCGCGGCGTCATCAAGGCGGACGGCGTCGGCGGCCTCTACAGCGG GCTGACGGCCGGCATCACCCGGCAGGCCGTCTACACGACACTGCGGCTCG GTCTCTTTGACAAGTTCAAGGAGGCCCGCGCCGGGACCGGCCCGCAAAAG AGGTTGATATCCTTTCTGTATTCTGTGTGCAGTTGACGGCTTTGTAGCGG CAGAGGATGGTGCCACGCCGGGCCGGATCAGATCAGACGGAAAAAATAGT CGAGTGTGCTTCACAGAGGGACGAGAACTTGTGTCGGCACCGCAATGCTG GGAAAGTCGATCAATGCCGTGCGCGCAGGATGCTGAGCTTATCTTAGCGC GAAGTCTTCTTTCTGAGGTTTTGAGCATCCCTTGTGAGTGGTTCGATCTA AATTCCGTCCGACCTGCGCCCACTTCCATACCCCGGCACCGGAAATCGTC GCCGCTGTTCCGGCCAGGGAGCTGACGGGACTGGACCGCGCGGGCATCGG TCTCGCGGCCGGCGGTATCGCGAGCTTCATGACCTGCCCCATCGAGGTCT GCCTCGTCCGGATGCAGGTAAACATTTTCGACGGTGGTAAACAAGCTGGC AGCGTGACATTGGTGGCTGTGCAGCCTGGCGCAGGAGGAATGGGGCGATT CTGCCGCGTGGTTGTCAGTACTGCCGGCGTCGTGTCCCCTCACTCTCCAC TGACCGCCGCCGTCGCCGTTGCAACCGCTTCCCCCGCGTTCGGCGATTGT GGCCGTTGCTGCTGTCGTTGCCATTGCTGGCGCGCTGTGGCCGCCGCCGC CACCGCCGCCGTTCGCCGTCGCCGTCGTTCGCTGCCGCCGTTCGTTGCCG CGGTTCGCCGCCGTCTCCGTGGCAGGCGGACGGACGGCTGCCACCTGCGG AGCGCCGCGGCTACAAGCACATTGGGGACGCGCTGATGCGCGTCGCGAAG GAAGAGGGCGTGCGGACGTACTGGCGGGGCGCCACGCCAACCGGTGAGTG CCGGCGACGGCCAGCCTGTAGCAGTGACGCCCGCCCGAACGGAAATCTCA CGGCGCGCTCGTGTTCGCTGCCTTTTCTTTCTTCACTCTGAAAGAGCCGC ATCTGCCTGCCTCGCCTGTCTCGTCTGTCGTCTCCTTTTCGACTTGCCGT CTTCCGGCGGCCGCCATACCTCGCGGCCGTAATTTGAACCTGGACTGGAA CTGGAACCGGAACCGGCAGTGGCGCGGGCGATGGTGGTGTCGATGACGCA ACTCGGCACGTACGATCAGGCCAAAACGATGCTCACGCCCGTTCTCGGAG ACTCCGCCGCCAACCACCTGAGCTCAGGTGAATGAGAGGGCAAGAATTGC CGCTGGTTGGCGGGTTGGTGGGGAGGCGAGTCGACTATTCTCGTGCTGCC AGGGCGGCCGTCTGACGGTAGGCGTGACGGCCAATCTGCTGGTTATGTTA TATTAAAGATCTCTTCCTCATTGTCCTACAGTGTGCTCTCATCTCTCCCA CTCTTCCCAGTCGCTGTTCCATCTGATGGTGTCGTGCTCGATGACTCTTA CACGAACTCACCAGTCAGAACCAGATTCATTATTGACGGGTTCTCCCTTA ACTTTTACCTGTGTGGCGGGGTCCGGCAACGGTGGTGGCGGCGGCGGCGG CGGCGATGACGACGGCGACGATATTGGTAACGGCGACAATGATGGCAGCG CTCATCGCTGCGGTGGTGTACTCGCTGGCGTCGCTGCCGCTCGATACGGC CAAGACACGCATGCAGGCGGCGGCTGCCGGCGGCCCCGCCGTTTACAGGT CGACGGCTCAGGTACAGTCGGCGGCGGACGACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5158:135..2269-

>mRNA_P-wetherbeei_contig5158.1.1 ID=mRNA_P-wetherbeei_contig5158.1.1|Name=mRNA_P-wetherbeei_contig5158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=732bp|location=Sequence derived from alignment at P-wetherbeei_contig5158:135..2269- (Phaeothamnion wetherbeei SAG_119_79)
TTGACAGGGGCATCGGGCATAAGCGCCTGGCTCTTCGTCCACCCCGCAGA
TGTGATCAAGGTTCGGATGCAGCTCATGAGCGGCACCTCCGGCGTGCCGC
CGCCGAGCGCCTTCGCCGCCGCTCGCGGCGTCATCAAGGCGGACGGCGTC
GGCGGCCTCTACAGCGGGCTGACGGCCGGCATCACCCGGCAGGCCGTCTA
CACGACACTGCGGCTCGGTCTCTTTGACAAGTTCAAGGAGGCCCGCGCCG
GGACCGGCCCGCAAAAGAGGGAGCTGACGGGACTGGACCGCGCGGGCATC
GGTCTCGCGGCCGGCGGTATCGCGAGCTTCATGACCTGCCCCATCGAGGT
CTGCCTCGTCCGGATGCAGGCGGACGGACGGCTGCCACCTGCGGAGCGCC
GCGGCTACAAGCACATTGGGGACGCGCTGATGCGCGTCGCGAAGGAAGAG
GGCGTGCGGACGTACTGGCGGGGCGCCACGCCAACCGTGGCGCGGGCGAT
GGTGGTGTCGATGACGCAACTCGGCACGTACGATCAGGCCAAAACGATGC
TCACGCCCGTTCTCGGAGACTCCGCCGCCAACCACCTGAGCTCAGCGCTC
ATCGCTGCGGTGGTGTACTCGCTGGCGTCGCTGCCGCTCGATACGGCCAA
GACACGCATGCAGGCGGCGGCTGCCGGCGGCCCCGCCGTTTACAGGTCGA
CGGCTCAGGTACAGTCGGCGGCGGACGACTGA
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