mRNA_P-wetherbeei_contig5158.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: D8LMW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMW0_ECTSI) HSP 1 Score: 286 bits (733), Expect = 6.890e-94 Identity = 157/242 (64.88%), Postives = 188/242 (77.69%), Query Frame = 1
Query: 1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAA---GGPAVYRSTAQVQS 717
+ GASGISAW+FVHP DV+KVRMQL +G +G P AAA+ V G+ G+Y+GL+A +TRQAVYTTLR+GL+D ++ ++ ++ L RA +GL AGGIASFM CPIEVC+VRMQ+D RLP A+R GYKHIGDAL R+AKEEGVRTYWRGATPTV+RAMVVSMTQLGTYDQAKT+L P+LGD+ HL+SAL AAVVYS ASLPLD+AKTRMQ+ AA G P Y ST Q S
Sbjct: 21 VAGASGISAWMFVHPMDVLKVRMQLGAG-AGHP----MAAAKLVYGESGLRGMYAGLSAAVTRQAVYTTLRVGLYDWIRDHAVHKFVKQEDINVLHRAAVGLTAGGIASFMCCPIEVCMVRMQSDARLPQADRLGYKHIGDALFRIAKEEGVRTYWRGATPTVSRAMVVSMTQLGTYDQAKTVLLPILGDNKGLHLASALTAAVVYSYASLPLDSAKTRMQSQAASTDGKPLKYTSTLQTLS 257
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A835Z4J2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J2_9STRA) HSP 1 Score: 275 bits (702), Expect = 3.030e-89 Identity = 159/243 (65.43%), Postives = 179/243 (73.66%), Query Frame = 1
Query: 1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAA---GGPAVYRSTAQVQSA 720
+ GASGISAW+F+HPAD+IKVRMQL+ G SG +A A + + GV GLY+GL+A ITRQAVYTT RLGL+D K A A P E+T L R GLAAGGIA+F+TCPIEVCLVRMQADGRLPPAERRGY ++ +AL RVAKEEGV TYWRGA+PTVARAMVVS TQLGTYDQ KT L P+LGD AA +AL AAVVYS ASLPLDTAKTRMQ A G P Y Q A
Sbjct: 16 VAGASGISAWMFIHPADLIKVRMQLL-GNSGAKT-TASMAFNEIRRTQGVKGLYAGLSAAITRQAVYTTARLGLYDIIKAAIA---PPGTEVTVLHRLTTGLAAGGIAAFLTCPIEVCLVRMQADGRLPPAERRGYTNVFNALGRVAKEEGVLTYWRGASPTVARAMVVSATQLGTYDQVKTSLLPILGDGAATQTVAALTAAVVYSYASLPLDTAKTRMQGQARARDGAPLKYTGMLQTVGA 253
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A4D9CTP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTP4_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.070e-80 Identity = 144/238 (60.50%), Postives = 166/238 (69.75%), Query Frame = 1
Query: 10 ASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAK-TMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAA----GGPAVYRSTAQ 708
ASG+S WL VHPADV+KVRMQL G A+ +IK +G GLYSGL+A I RQ YTT+RLG FD+ K A Q+ LT R+ + AG ASF+ CP+EVCLVRMQADG+LPP +RRGYKH+GDAL+RVA+EEGV TYWRGA PTV RAMVVS TQLGTYDQAK T L D + HL S+L A +VYSLASLPLDTAKTRMQ+ AA GG YRST Q
Sbjct: 38 ASGVSGWLIVHPADVVKVRMQLAGKAGG----GMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALT---RSMSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQ 268
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: W7TLF9_9STRA (Mitochondrial 2-oxoglutarate malate carrier protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLF9_9STRA) HSP 1 Score: 223 bits (568), Expect = 8.140e-69 Identity = 131/222 (59.01%), Postives = 152/222 (68.47%), Query Frame = 1
Query: 58 KVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAK-TMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAA----GGPAVYRSTAQ 708
+VRMQL G A+ +IK +G GLYSGL+A I RQ YTT+RLG FD+ K A Q+ LT R+ + AG ASF+ CP+EVCLVRMQADG+LPP +RRGYKH+GDAL+RVA+EEGV TYWRGA PTV RAMVVS TQLGTYDQAK T L D + HL S+L A +VYSLASLPLDTAKTRMQ+ AA GG YRST Q
Sbjct: 50 QVRMQLAGKAGG----GMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALT---RSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQ 264
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A7S1JD16_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JD16_9EUGL) HSP 1 Score: 213 bits (541), Expect = 5.610e-65 Identity = 126/240 (52.50%), Postives = 155/240 (64.58%), Query Frame = 1
Query: 7 GASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTML--TPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAA-AGGPAVYRSTAQVQS 717
GA GI+ W+FVHP DV+K RMQL+ SG + A G++K +G GLYSGL+A + RQ YTT RLGL+ ++ G Q T R G+ AG IAS + PIEVCLVRMQ+DGRLP AE+R YKHI DAL RVA+EEG+ TYWRG TPTV RA+VVS+TQ+ YDQ K L + D+ HLSS+++A +YS ASLP DT KTRMQ G +Y STAQ S
Sbjct: 14 GAGGITGWMFVHPMDVLKTRMQLLG--SGGKNTGVVSLASGILKNEGAKGLYSGLSAAMMRQVTYTTARLGLYGSLRDLIVKPGQQA---TLGQRVLAGVGAGAIASSVCNPIEVCLVRMQSDGRLPKAEQRNYKHIFDALGRVAREEGILTYWRGCTPTVVRAIVVSVTQVAGYDQIKASLLNSGWFQDNMYCHLSSSVLAGFIYSAASLPFDTTKTRMQTQKPVDGKLLYTSTAQTMS 248
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A0G4GW21_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GW21_VITBC) HSP 1 Score: 207 bits (527), Expect = 1.060e-62 Identity = 123/226 (54.42%), Postives = 154/226 (68.14%), Query Frame = 1
Query: 1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVP--PPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTML---TPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQ 663
L+G++GI WL VHP DV+K+RMQL + G S A A+ + K +G+ GLYSGL+AGITRQA YTTLR GL+ ++ G T + G GL +G IAS + CP+EV LVRMQADGRLP AERRGY ++ +AL R+AKEEG+ T WRG+TPTVARAMVV+M Q G+YDQAK +L TP+ G H S++LI+ YS ASLP D AKTRMQ
Sbjct: 20 LSGSAGILGWLPVHPFDVLKIRMQLNAEGGGTKLYKNSVDAVAK-IFKTEGLWGLYSGLSAGITRQATYTTLRGGLYQILRDRYTVPGANP---TVAVKLGCGLTSGAIASVVCCPVEVSLVRMQADGRLPVAERRGYTNVFNALYRIAKEEGILTCWRGSTPTVARAMVVNMVQFGSYDQAKEVLMAMTPLKGVGL--HFSASLISGFTYSAASLPFDIAKTRMQ 239
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A7S2TXY1_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2TXY1_9EUKA) HSP 1 Score: 206 bits (525), Expect = 1.730e-62 Identity = 114/223 (51.12%), Postives = 146/223 (65.47%), Query Frame = 1
Query: 1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTP--VLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQ 663
++G +G+S W+FVHP DV+KVRMQ+ G A A + K +G+ GLYSGL+A +TRQ YTTLRLGL+D ++ + + ++ + G GLAAG A+ + CP+EV LVRMQADG P A+RR YKHI DA+MRV EEG+ T WRG PTV R VVS TQL TYDQAK+ML +L + HL+S+LI+ VY SLPLD KTRMQ
Sbjct: 18 ISGFAGVSGWMFVHPFDVLKVRMQVNKSKVG-----ALATLMNIHKQEGITGLYSGLSAAVTRQLTYTTLRLGLYDVIRDKLS---EGRSDIPFYLKLGTGLAAGATAATICCPVEVSLVRMQADGNRPLADRRNYKHIFDAMMRVTAEEGITTLWRGVVPTVFRGAVVSTTQLATYDQAKSMLKSFNILNEGVGLHLASSLISGFVYCFTSLPLDICKTRMQ 232
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A7S4GIE6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GIE6_9EUGL) HSP 1 Score: 201 bits (512), Expect = 6.260e-61 Identity = 113/207 (54.59%), Postives = 141/207 (68.12%), Query Frame = 1
Query: 49 DVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKT--MLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQ 663
DV+K RMQ++ T S A A ++K +G+ GLYSGL+A I RQ YTT RLGL+ ++ P R T + R G +AAG A+ + P+EVCLVRMQADGRLPPAE+RGYKH+GDALMRVA+EEGV TYWRG TPTV RA+VVS+TQ+ YDQ K + T D+ HL+S++ A +YSLASLP DT KTRMQ
Sbjct: 2 DVMKTRMQILGQTGETM--STGALANSIVKKEGIPGLYSGLSAAILRQITYTTTRLGLYGTIRDVIT---PVDRPATVVHRVGAAVAAGAAAACVCNPVEVCLVRMQADGRLPPAEQRGYKHVGDALMRVAREEGVLTYWRGCTPTVVRAIVVSVTQVAGYDQIKAGFLSTGYFQDNIFCHLTSSVAAGFIYSLASLPFDTTKTRMQ 203
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: A0A2V3IHJ8_9FLOR (Mitochondrial 2-oxoglutarate/malate carrier protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHJ8_9FLOR) HSP 1 Score: 201 bits (512), Expect = 1.610e-60 Identity = 110/224 (49.11%), Postives = 154/224 (68.75%), Query Frame = 1
Query: 7 GASGISAWLFVHPADVIKVRMQLMS-GTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLDRAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTP----VLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQ 663
G +G+ +WL +HPADVIKVRMQ+ GT+ P AAR + K +GV +YSGL+A +TRQ YTTLRLGL+ F++A ++ ++ + GIG+AAGGIAS + P+E+ +VRM +DG ++RRGY++I DAL R+A+EEGVR WRGATPTVAR+MVV+ QLGTYDQAK + + VL D H +++ + YS+ +LP+D+AKTR+Q
Sbjct: 22 GTAGVLSWLLIHPADVIKVRMQIAGEGTTETPYRGFLHAARMISKTEGVKAMYSGLSAALTRQVTYTTLRLGLYSTFRDAYM---KERSSISTGAKFGIGMAAGGIASAIATPVELSMVRMYSDGAAEASKRRGYRNIFDALWRIAREEGVRGLWRGATPTVARSMVVNCVQLGTYDQAKEVFSGLGIGVLQDGVPLHFAASTTSGFCYSVVTLPIDSAKTRLQ 242
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Match: D7G058_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G058_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.130e-59 Identity = 111/238 (46.64%), Postives = 156/238 (65.55%), Query Frame = 1
Query: 1 LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVGGLYSGLTAGITRQAVYTTLRLGLFDKFKEARAGTGPQKRELTGLD----RAGIGLAAGGIASFMTCPIEVCLVRMQADGRLPPAERRGYKHIGDALMRVAKEEGVRTYWRGATPTVARAMVVSMTQLGTYDQAKTMLTPVLGDSAANHLSSALIAAVVYSLASLPLDTAKTRMQAAAAGGPAVYRST 702
+ GASG+SAW+F+HPAD+IK RMQL+ + +A + + ++K +GV LY+GL+A + RQA YTTLRLGL+D + R + ++ G+ R IG +GG+ASF +CPIEVCLVRMQADG+LP ++RGY+ + AL R+A++EG YWRG TV RAMVVS++Q+ TYDQAK L P + HL + +I+A+ ++ S+P DT KTR+Q AG Y T
Sbjct: 41 VAGASGMSAWVFIHPADLIKTRMQLLGDSKK--GATAVSVGKDLVKNEGVTALYAGLSAALARQASYTTLRLGLYDLLR--RLVLDSRTSDMNGVQLLLLRILIGAVSGGMASFCSCPIEVCLVRMQADGKLPKDQQRGYRGVFHALYRIARDEGALAYWRGGGTTVLRAMVVSVSQIATYDQAKASLAPYV-QGFRQHLVAGVISALTFTTISMPFDTVKTRVQQEKAGSKPRYTGT 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5158.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5158.1.1 >prot_P-wetherbeei_contig5158.1.1 ID=prot_P-wetherbeei_contig5158.1.1|Name=mRNA_P-wetherbeei_contig5158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=244bp LTGASGISAWLFVHPADVIKVRMQLMSGTSGVPPPSAFAAARGVIKADGVback to top mRNA from alignment at P-wetherbeei_contig5158:135..2269- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5158.1.1 ID=mRNA_P-wetherbeei_contig5158.1.1|Name=mRNA_P-wetherbeei_contig5158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2135bp|location=Sequence derived from alignment at P-wetherbeei_contig5158:135..2269- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5158:135..2269- >mRNA_P-wetherbeei_contig5158.1.1 ID=mRNA_P-wetherbeei_contig5158.1.1|Name=mRNA_P-wetherbeei_contig5158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=732bp|location=Sequence derived from alignment at P-wetherbeei_contig5158:135..2269- (Phaeothamnion wetherbeei SAG_119_79)back to top |