mRNA_P-wetherbeei_contig21038.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: A0A6I3EZB0_9ACTN (MFS transporter n=2 Tax=root TaxID=1 RepID=A0A6I3EZB0_9ACTN) HSP 1 Score: 197 bits (502), Expect = 7.730e-59 Identity = 104/131 (79.39%), Postives = 117/131 (89.31%), Query Frame = 1
Query: 79 TPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
+PFR++ARTHALM+ GDVAMY ALAGSVLFSL DAQR KVLLYLLVSVAPFAVVAP IGPTVDRIPGGRR VMQ+TS+ R ++Y+VMAFHT D+LLYPL+FG MV+ KTY VSKSALVPSVVR+D ELVE
Sbjct: 5 SPFRKLARTHALMAMGDVAMYGALAGSVLFSLPADAQRDKVLLYLLVSVAPFAVVAPAIGPTVDRIPGGRRMVMQITSMTRALLYVVMAFHTGDLLLYPLIFGAMVMQKTYTVSKSALVPSVVRSDAELVE 135
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: A0A7X9Q1C4_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9Q1C4_9ACTN) HSP 1 Score: 194 bits (494), Expect = 2.170e-57 Identity = 111/173 (64.16%), Postives = 133/173 (76.88%), Query Frame = 1
Query: 1 VTNERLRADAVYRRGTRPGPSRPV-------------PV---TPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
+++ER+RADAVYR G RP SRP PV +PFRR+ART AL++ GD AMY A+AG VL SL PDAQR VL YL+VS APF VVAPLIGPT+DRIPGGRR V+Q+T++ R V+Y+ MAFHTDD+LLYPLVF +V+ KTYAVSKSALVPSVVR+D+ELVE
Sbjct: 1 MSSERVRADAVYRSGERPRSSRPAGTGSGGGGHRRQRPVQNQSPFRRLARTTALIAIGDAAMYGAVAGEVL-SLGPDAQRSAVLRYLIVSFAPFVVVAPLIGPTIDRIPGGRRMVVQITAVARAVLYVFMAFHTDDILLYPLVFVALVMQKTYAVSKSALVPSVVRSDDELVE 172
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: A0A3C2B5N0_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B5N0_9ACTN) HSP 1 Score: 176 bits (445), Expect = 2.000e-53 Identity = 103/170 (60.59%), Postives = 127/170 (74.71%), Query Frame = 1
Query: 1 VTNERLRADAVYRRGTRPGP------------SRPVPV-TPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
++NER+R +AVY G RP P +R V TPFRR+ARTHALM+ GDVAM+A+LAGSVL L P QR VL YL+VS APF V+APLIGPT+DRIPGGRR V+Q T++ R +Y++MAFHT DVLLYPL+ +V+ KTYAVSK+A+VP VVRN+EELVE
Sbjct: 1 MSNERVRPNAVYPAGRRPRPGQRDSSNATGSTTRSVSTQTPFRRLARTHALMTVGDVAMFASLAGSVL-GLDPAGQRDAVLKYLVVSFAPFVVLAPLIGPTIDRIPGGRRVVIQGTAVVRAALYVLMAFHTKDVLLYPLLLIALVMQKTYAVSKTAVVPLVVRNEEELVE 169
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: A0A6I3WPW9_9ACTN (MFS transporter n=2 Tax=root TaxID=1 RepID=A0A6I3WPW9_9ACTN) HSP 1 Score: 152 bits (383), Expect = 5.890e-41 Identity = 84/141 (59.57%), Postives = 106/141 (75.18%), Query Frame = 1
Query: 49 RPGPSRPVPVTPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
RP P+ P ++PF R+AR A+ +AGD + ALA SV F LSP A RPKVLL+LLV+ PF VVAP+IGP VDR+ GGRR VMQ+ +L R + L+MAFH DDVLLYP+ F +VL KT ++SKSALVPSVVR++ +LVE
Sbjct: 28 RPAPAGPR-ISPFTRLARVQAISAAGDGCLAVALAVSVFFGLSPTAARPKVLLFLLVTFIPFVVVAPMIGPLVDRVAGGRRLVMQVVALLRALSLLLMAFHLDDVLLYPIAFAALVLQKTQSISKSALVPSVVRHESDLVE 167
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: A0A7K1B9H3_9ACTN (MFS transporter (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1B9H3_9ACTN) HSP 1 Score: 148 bits (373), Expect = 9.860e-40 Identity = 81/138 (58.70%), Postives = 105/138 (76.09%), Query Frame = 1
Query: 58 PSRPVPVTPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
P+ P + F R+ARTHA M+AGD AM ALA SVLFSL DA R +VLL+L +S PF VAPLIGP +DR+ GGRR V+Q+ ++ RVV+ ++MAF+ D +LL+PL F +V KTYA+SKSALVP+VVR++EELVE
Sbjct: 9 PTGAAPSSRFGRLARTHATMAAGDAAMAVALADSVLFSLDADAARSRVLLFLGISFVPFLFVAPLIGPAIDRMKGGRRLVVQIVTVVRVVLSVLMAFNADSLLLFPLAFMALVAQKTYAISKSALVPTVVRSEEELVE 146
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: A0A7K0VJB8_9ACTN (MFS transporter n=2 Tax=root TaxID=1 RepID=A0A7K0VJB8_9ACTN) HSP 1 Score: 146 bits (368), Expect = 5.400e-39 Identity = 87/168 (51.79%), Postives = 112/168 (66.67%), Query Frame = 1
Query: 1 VTNERLRAD-----------AVYRRGTRPGPSRPVPVTPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
+T+ERLR R G RP ++P +PF R+AR A+ +AGD + ALA SV F L+P A RPKVLL+L+V+ PF VVAPLIGP VDR+ GGRR VMQ+ +L R ++MAFH +DVLLYP+ F +VL KT +S+SALVPSVVRN+ +LVE
Sbjct: 1 MTSERLRGSRSEIHASRTSGTSSRIGNRPLTAQPR-FSPFTRLARVQAVSAAGDGCLALALAASVFFGLTPTAARPKVLLFLVVTFVPFVVVAPLIGPLVDRVAGGRRLVMQIVALLRAFTMVLMAFHLNDVLLYPIAFAALVLQKTQGISRSALVPSVVRNETDLVE 167
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: A0A7W1Z8N6_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1Z8N6_9ACTN) HSP 1 Score: 145 bits (367), Expect = 8.070e-39 Identity = 77/134 (57.46%), Postives = 100/134 (74.63%), Query Frame = 1
Query: 70 VPVTPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
VP + FRR+A THA M GD AM ALA S+ FS+ P A R KVLL+L++S APF V+APL+GP +DR GGRR V+Q+ + R+V+ L++A + D + L+PLVF +VL KTY VSKSALVPSVVR++ ELVE
Sbjct: 18 VPASKFRRLATTHAAMIGGDAAMIVALADSLFFSIDPGAARGKVLLFLVISFAPFLVIAPLVGPVIDRAAGGRRLVIQIVAALRIVLSLLIASYVDSLALFPLVFSALVLQKTYTVSKSALVPSVVRSESELVE 151
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: A0A4P5S5B2_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5S5B2_9ACTN) HSP 1 Score: 145 bits (365), Expect = 9.990e-39 Identity = 77/143 (53.85%), Postives = 102/143 (71.33%), Query Frame = 1
Query: 43 GTRPGPSRPVPVTPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
G RPG P+ P R+ R HALM+AG+ M ALA S+ S+SPDA R KV+L+L +S+APFAVVAPL+GP +DR+PGG+R V+ L S R V+ + M FH D + L+PL F +VLSKTY+++KSALVP+ + DE LVE
Sbjct: 13 GRRPGGL--APIAPLVRLKRVHALMTAGETIMAVALADSLFLSISPDAARTKVILFLAISMAPFAVVAPLVGPAIDRMPGGQRLVIVLVSFLRAVVMVAMMFHVDSLALFPLAFAALVLSKTYSIAKSALVPTTIVGDEGLVE 153
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: A0A6C7E2X7_ILUCY (Putative major facilitator superfamily transporter n=2 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A6C7E2X7_ILUCY) HSP 1 Score: 143 bits (361), Expect = 4.060e-38 Identity = 77/132 (58.33%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 76 VTPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
++PF R+A THALM AGD AM ALA S FS+ DA R +VL++L +S APF VAPLIGP +DRI GGRR V+Q ++ R+V+ ++MA + D ++L+PLVFG +VL KTY VSKSALVPS VR++ ELVE
Sbjct: 1 MSPFTRLAVTHALMMAGDAAMVVALADSFFFSVELDAARTQVLMFLAISFAPFLFVAPLIGPLIDRIAGGRRLVIQTVAIARLVLLILMAQYIDGIVLFPLVFGSLVLQKTYVVSKSALVPSTVRSETELVE 132
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Match: UPI000E34C615 (hypothetical protein n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E34C615) HSP 1 Score: 143 bits (360), Expect = 1.370e-37 Identity = 77/131 (58.78%), Postives = 98/131 (74.81%), Query Frame = 1
Query: 79 TPFRRMARTHALMSAGDVAMYAALAGSVLFSLSPDAQRPKVLLYLLVSVAPFAVVAPLIGPTVDRIPGGRRFVMQLTSLGRVVIYLVMAFHTDDVLLYPLVFGVMVLSKTYAVSKSALVPSVVRNDEELVE 471
+PFRR+A HA M D AM ALA +V FS+ P A R KVLL+L++S APF V+APLIGP +DRI GGRR ++Q + RVV+ +VMA DDV+L+PLVF +VL KTY VSKSALVPSVVR++ +L+E
Sbjct: 19 SPFRRLAIVHAAMMGADAAMVVALADTVFFSVDPQAARDKVLLFLVISFAPFLVLAPLIGPLLDRIAGGRRAMIQFVGISRVVLSIVMAVFVDDVVLFPLVFIALVLQKTYIVSKSALVPSVVRSESDLIE 149 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21038.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21038.1.1 >prot_P-wetherbeei_contig21038.1.1 ID=prot_P-wetherbeei_contig21038.1.1|Name=mRNA_P-wetherbeei_contig21038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp VTNERLRADAVYRRGTRPGPSRPVPVTPFRRMARTHALMSAGDVAMYAALback to top mRNA from alignment at P-wetherbeei_contig21038:2..472- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21038.1.1 ID=mRNA_P-wetherbeei_contig21038.1.1|Name=mRNA_P-wetherbeei_contig21038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig21038:2..472- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21038:2..472- >mRNA_P-wetherbeei_contig21038.1.1 ID=mRNA_P-wetherbeei_contig21038.1.1|Name=mRNA_P-wetherbeei_contig21038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig21038:2..472- (Phaeothamnion wetherbeei SAG_119_79)back to top |