mRNA_P-wetherbeei_contig20602.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A7C6YWR3_9FIRM (Nucleoid-associated protein GX528_08470 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6YWR3_9FIRM) HSP 1 Score: 90.5 bits (223), Expect = 5.840e-22 Identity = 42/75 (56.00%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
+AG G + V VNGHQ+V S+KI+P AVDPED+EMLEDL++ AVNDG+ K+K ++G ++ +T GL +PPGLF
Sbjct: 32 TAGGGVVTVVVNGHQEVQSVKIEPDAVDPEDVEMLEDLVLAAVNDGLRKAKELSGSEIEKVTGGLNLPGMPPGLF 106
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A7C6INU9_9CLOT (Nucleoid-associated protein GXZ55_04270 n=1 Tax=Natronincola sp. TaxID=2699832 RepID=A0A7C6INU9_9CLOT) HSP 1 Score: 85.9 bits (211), Expect = 3.890e-20 Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
+AG G I V VNGHQ + IKIDP AVDPED+EMLEDLI+ AVNDGI KS+ ++ +++ +T + LPPGLF
Sbjct: 32 TAGGGVITVIVNGHQDIREIKIDPDAVDPEDVEMLEDLILAAVNDGIRKSRELSANELEKVTGQVNLQGLPPGLF 106
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A535MQW2_9CHLR (Nucleoid-associated protein E6J01_01575 n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535MQW2_9CHLR) HSP 1 Score: 85.9 bits (211), Expect = 4.110e-20 Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
SAG G + V NGHQ+V+S+ + P+ VDP D++ML+DL++ AVND +EK++ + +MG LT GL GL LPPGL
Sbjct: 33 SAGGGMVTVVANGHQKVLSVTVKPEVVDPGDVDMLQDLVLAAVNDALEKARDLAAREMGTLTGGLGGLGLPPGLM 107
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A154BUS1_ANASB (Nucleoid-associated protein AXX12_17030 n=1 Tax=Anaerosporomusa subterranea TaxID=1794912 RepID=A0A154BUS1_ANASB) HSP 1 Score: 84.3 bits (207), Expect = 1.800e-19 Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
+AG GA+KV +NG +Q+ SIKI+P AVDPED+EMLEDL++ AVN+ I+K +T +MG LT GL LPPG+
Sbjct: 40 TAGGGAVKVVINGEKQLQSIKINPSAVDPEDVEMLEDLVLAAVNEAIKKVDDMTNQEMGKLTGGLN---LPPGML 111
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: UPI000B14B824 (YbaB/EbfC family nucleoid-associated protein n=1 Tax=Massilibacillus massiliensis TaxID=1806837 RepID=UPI000B14B824) HSP 1 Score: 84.0 bits (206), Expect = 2.560e-19 Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
SAG GAIKV +NG +Q+ S+KIDP AVDP DIEMLEDL+ AVN+ I K + +MG LT GL LPPG+F
Sbjct: 40 SAGGGAIKVVINGEKQIQSLKIDPSAVDPADIEMLEDLVAAAVNEAIRKVDDMMSQEMGKLTG---GLGLPPGMF 111
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A2V2Z4P1_9BACL (Nucleoid-associated protein DFQ01_105281 n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A2V2Z4P1_9BACL) HSP 1 Score: 83.6 bits (205), Expect = 2.930e-19 Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
+AG G + V+VNGH+QV+SI I P+AVDPEDIEML+DL+MTAVND + K++ + D M T GLK PGLF
Sbjct: 33 TAGGGVVTVQVNGHKQVLSINIKPEAVDPEDIEMLQDLVMTAVNDALTKAEELANDDMSKYTGGLK----IPGLF 103
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A7C6RCJ3_9FIRM (Nucleoid-associated protein GX407_09725 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6RCJ3_9FIRM) HSP 1 Score: 83.2 bits (204), Expect = 3.940e-19 Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
SAG G + V VNG QV+ +KIDP AVDP+D+EMLEDL+M A N+ + +++++ ++MG LT GLK LPPGL
Sbjct: 30 SAGGGVVTVTVNGENQVVGVKIDPDAVDPDDVEMLEDLVMAATNEALRRAQAMVAEEMGKLTGGLK---LPPGLI 101
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: E0IDD2_9BACL (Nucleoid-associated protein PaecuDRAFT_3636 n=3 Tax=Paenibacillus TaxID=44249 RepID=E0IDD2_9BACL) HSP 1 Score: 83.2 bits (204), Expect = 4.160e-19 Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
SAG G + VKVNGH+QV+SI I P+ VDPEDIEML+DL++TAVND + K++ + + MG T G+K PGLF
Sbjct: 33 SAGGGVVNVKVNGHKQVLSITIKPEVVDPEDIEMLQDLVITAVNDALAKAEEMANEDMGKYTGGMK----IPGLF 103
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A0K8JED3_9FIRM (Nucleoid-associated protein P22_1732 n=1 Tax=Propionispora sp. 2/2-37 TaxID=1677858 RepID=A0A0K8JED3_9FIRM) HSP 1 Score: 82.8 bits (203), Expect = 7.300e-19 Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
S+G GAIK+ +NG +Q+ S+KI+P AVDP+D+EMLEDLI AVN+ I+K + +MG LT GL LPPGLF
Sbjct: 40 SSGGGAIKIIINGEKQIQSVKIEPSAVDPQDVEMLEDLIAAAVNEAIKKVDDMMAAEMGKLTGGLN---LPPGLF 111
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A1H8Y4E9_9FIRM (Nucleoid-associated protein SAMN04490178_14223 n=4 Tax=root TaxID=1 RepID=A0A1H8Y4E9_9FIRM) HSP 1 Score: 82.8 bits (203), Expect = 7.300e-19 Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 225
S+G GA+K+ + G +Q+ S+KIDP AVDPEDIEMLEDLI AVN+ I+K + +MG LT GL LPPG+F
Sbjct: 40 SSGGGAVKIVITGEKQIQSVKIDPGAVDPEDIEMLEDLIAAAVNEAIKKVDDMMAQEMGKLTGGLN---LPPGMF 111 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20602.2.1 >prot_P-wetherbeei_contig20602.2.1 ID=prot_P-wetherbeei_contig20602.2.1|Name=mRNA_P-wetherbeei_contig20602.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=76bp SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSback to top mRNA from alignment at P-wetherbeei_contig20602:986..1213- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20602.2.1 ID=mRNA_P-wetherbeei_contig20602.2.1|Name=mRNA_P-wetherbeei_contig20602.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=228bp|location=Sequence derived from alignment at P-wetherbeei_contig20602:986..1213- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20602:986..1213- >mRNA_P-wetherbeei_contig20602.2.1 ID=mRNA_P-wetherbeei_contig20602.2.1|Name=mRNA_P-wetherbeei_contig20602.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=228bp|location=Sequence derived from alignment at P-wetherbeei_contig20602:986..1213- (Phaeothamnion wetherbeei SAG_119_79)back to top |