prot_P-wetherbeei_contig20602.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20602.2.1
Unique Nameprot_P-wetherbeei_contig20602.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length76
Homology
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A7C6YWR3_9FIRM (Nucleoid-associated protein GX528_08470 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6YWR3_9FIRM)

HSP 1 Score: 90.5 bits (223), Expect = 5.840e-22
Identity = 42/75 (56.00%), Postives = 58/75 (77.33%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            +AG G + V VNGHQ+V S+KI+P AVDPED+EMLEDL++ AVNDG+ K+K ++G ++  +T GL    +PPGLF
Sbjct:   32 TAGGGVVTVVVNGHQEVQSVKIEPDAVDPEDVEMLEDLVLAAVNDGLRKAKELSGSEIEKVTGGLNLPGMPPGLF 106          
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A7C6INU9_9CLOT (Nucleoid-associated protein GXZ55_04270 n=1 Tax=Natronincola sp. TaxID=2699832 RepID=A0A7C6INU9_9CLOT)

HSP 1 Score: 85.9 bits (211), Expect = 3.890e-20
Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            +AG G I V VNGHQ +  IKIDP AVDPED+EMLEDLI+ AVNDGI KS+ ++ +++  +T  +    LPPGLF
Sbjct:   32 TAGGGVITVIVNGHQDIREIKIDPDAVDPEDVEMLEDLILAAVNDGIRKSRELSANELEKVTGQVNLQGLPPGLF 106          
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A535MQW2_9CHLR (Nucleoid-associated protein E6J01_01575 n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535MQW2_9CHLR)

HSP 1 Score: 85.9 bits (211), Expect = 4.110e-20
Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            SAG G + V  NGHQ+V+S+ + P+ VDP D++ML+DL++ AVND +EK++ +   +MG LT GL GL LPPGL 
Sbjct:   33 SAGGGMVTVVANGHQKVLSVTVKPEVVDPGDVDMLQDLVLAAVNDALEKARDLAAREMGTLTGGLGGLGLPPGLM 107          
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A154BUS1_ANASB (Nucleoid-associated protein AXX12_17030 n=1 Tax=Anaerosporomusa subterranea TaxID=1794912 RepID=A0A154BUS1_ANASB)

HSP 1 Score: 84.3 bits (207), Expect = 1.800e-19
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            +AG GA+KV +NG +Q+ SIKI+P AVDPED+EMLEDL++ AVN+ I+K   +T  +MG LT GL    LPPG+ 
Sbjct:   40 TAGGGAVKVVINGEKQLQSIKINPSAVDPEDVEMLEDLVLAAVNEAIKKVDDMTNQEMGKLTGGLN---LPPGML 111          
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: UPI000B14B824 (YbaB/EbfC family nucleoid-associated protein n=1 Tax=Massilibacillus massiliensis TaxID=1806837 RepID=UPI000B14B824)

HSP 1 Score: 84.0 bits (206), Expect = 2.560e-19
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            SAG GAIKV +NG +Q+ S+KIDP AVDP DIEMLEDL+  AVN+ I K   +   +MG LT    GL LPPG+F
Sbjct:   40 SAGGGAIKVVINGEKQIQSLKIDPSAVDPADIEMLEDLVAAAVNEAIRKVDDMMSQEMGKLTG---GLGLPPGMF 111          
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A2V2Z4P1_9BACL (Nucleoid-associated protein DFQ01_105281 n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A2V2Z4P1_9BACL)

HSP 1 Score: 83.6 bits (205), Expect = 2.930e-19
Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            +AG G + V+VNGH+QV+SI I P+AVDPEDIEML+DL+MTAVND + K++ +  D M   T GLK     PGLF
Sbjct:   33 TAGGGVVTVQVNGHKQVLSINIKPEAVDPEDIEMLQDLVMTAVNDALTKAEELANDDMSKYTGGLK----IPGLF 103          
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A7C6RCJ3_9FIRM (Nucleoid-associated protein GX407_09725 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6RCJ3_9FIRM)

HSP 1 Score: 83.2 bits (204), Expect = 3.940e-19
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            SAG G + V VNG  QV+ +KIDP AVDP+D+EMLEDL+M A N+ + +++++  ++MG LT GLK   LPPGL 
Sbjct:   30 SAGGGVVTVTVNGENQVVGVKIDPDAVDPDDVEMLEDLVMAATNEALRRAQAMVAEEMGKLTGGLK---LPPGLI 101          
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: E0IDD2_9BACL (Nucleoid-associated protein PaecuDRAFT_3636 n=3 Tax=Paenibacillus TaxID=44249 RepID=E0IDD2_9BACL)

HSP 1 Score: 83.2 bits (204), Expect = 4.160e-19
Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            SAG G + VKVNGH+QV+SI I P+ VDPEDIEML+DL++TAVND + K++ +  + MG  T G+K     PGLF
Sbjct:   33 SAGGGVVNVKVNGHKQVLSITIKPEVVDPEDIEMLQDLVITAVNDALAKAEEMANEDMGKYTGGMK----IPGLF 103          
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A0K8JED3_9FIRM (Nucleoid-associated protein P22_1732 n=1 Tax=Propionispora sp. 2/2-37 TaxID=1677858 RepID=A0A0K8JED3_9FIRM)

HSP 1 Score: 82.8 bits (203), Expect = 7.300e-19
Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            S+G GAIK+ +NG +Q+ S+KI+P AVDP+D+EMLEDLI  AVN+ I+K   +   +MG LT GL    LPPGLF
Sbjct:   40 SSGGGAIKIIINGEKQIQSVKIEPSAVDPQDVEMLEDLIAAAVNEAIKKVDDMMAAEMGKLTGGLN---LPPGLF 111          
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Match: A0A1H8Y4E9_9FIRM (Nucleoid-associated protein SAMN04490178_14223 n=4 Tax=root TaxID=1 RepID=A0A1H8Y4E9_9FIRM)

HSP 1 Score: 82.8 bits (203), Expect = 7.300e-19
Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    1 SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKSKSVTGDKMGALTQGLKGLPLPPGLF 75
            S+G GA+K+ + G +Q+ S+KIDP AVDPEDIEMLEDLI  AVN+ I+K   +   +MG LT GL    LPPG+F
Sbjct:   40 SSGGGAVKIVITGEKQIQSVKIDPGAVDPEDIEMLEDLIAAAVNEAIKKVDDMMAQEMGKLTGGLN---LPPGMF 111          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20602.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C6YWR3_9FIRM5.840e-2256.00Nucleoid-associated protein GX528_08470 n=1 Tax=Fi... [more]
A0A7C6INU9_9CLOT3.890e-2057.33Nucleoid-associated protein GXZ55_04270 n=1 Tax=Na... [more]
A0A535MQW2_9CHLR4.110e-2052.00Nucleoid-associated protein E6J01_01575 n=1 Tax=Ch... [more]
A0A154BUS1_ANASB1.800e-1956.00Nucleoid-associated protein AXX12_17030 n=1 Tax=An... [more]
UPI000B14B8242.560e-1958.67YbaB/EbfC family nucleoid-associated protein n=1 T... [more]
A0A2V2Z4P1_9BACL2.930e-1957.33Nucleoid-associated protein DFQ01_105281 n=2 Tax=P... [more]
A0A7C6RCJ3_9FIRM3.940e-1953.33Nucleoid-associated protein GX407_09725 n=1 Tax=Fi... [more]
E0IDD2_9BACL4.160e-1956.00Nucleoid-associated protein PaecuDRAFT_3636 n=3 Ta... [more]
A0A0K8JED3_9FIRM7.300e-1956.00Nucleoid-associated protein P22_1732 n=1 Tax=Propi... [more]
A0A1H8Y4E9_9FIRM7.300e-1956.00Nucleoid-associated protein SAMN04490178_14223 n=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004401Nucleoid-associated protein YbaB/EbfC familyPFAMPF02575YbaB_DNA_bdcoord: 1..65
e-value: 7.4E-22
score: 77.4
IPR004401Nucleoid-associated protein YbaB/EbfC familyTIGRFAMTIGR00103TIGR00103coord: 2..74
e-value: 2.8E-17
score: 60.7
IPR004401Nucleoid-associated protein YbaB/EbfC familyPIRSFPIRSF004555UCP004555coord: 1..75
e-value: 3.1E-23
score: 79.2
IPR004401Nucleoid-associated protein YbaB/EbfC familyPANTHERPTHR33449NUCLEOID-ASSOCIATED PROTEIN YBABcoord: 2..74
IPR036894Nucleoid-associated protein YbaB-like domain superfamilyGENE3D3.30.1310.10coord: 1..75
e-value: 8.5E-22
score: 79.1
IPR036894Nucleoid-associated protein YbaB-like domain superfamilySUPERFAMILY82607YbaB-likecoord: 2..67
NoneNo IPR availablePANTHERPTHR33449:SF1NUCLEOID-ASSOCIATED PROTEIN YBABcoord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20602contigP-wetherbeei_contig20602:986..1213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20602.2.1mRNA_P-wetherbeei_contig20602.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20602 986..1213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20602.2.1 ID=prot_P-wetherbeei_contig20602.2.1|Name=mRNA_P-wetherbeei_contig20602.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=76bp
SAGQGAIKVKVNGHQQVMSIKIDPKAVDPEDIEMLEDLIMTAVNDGIEKS
KSVTGDKMGALTQGLKGLPLPPGLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004401YbaB/EbfC
IPR036894YbaB-like_sf