mRNA_P-wetherbeei_contig20208.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: UPI00188B9FFD (recombinase family protein n=1 Tax=Microbacterium sp. VKM Ac-2870 TaxID=2783825 RepID=UPI00188B9FFD) HSP 1 Score: 385 bits (988), Expect = 1.070e-127 Identity = 194/279 (69.53%), Postives = 229/279 (82.08%), Query Frame = 1
Query: 19 GTAVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVPVAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDAR 855
G AV+YLRVST RQ+ TA DID DGNSIATQREA M RAKR K PV FVEPG+SAQ+IA RPVFR++LHYIEEHPEVT V+IYMRSR FRN DAAITKRILASM VKLISAKE+FGEGYMADAMEA+TDIMNEVQVRQSGEDI K+LNKAK+GGT GRAKLGY+N R+ DG VN I++D +RAPL+ WAF+QYATG+YS+ QL + L LGL TR + K +P+S + LA++LRDPYY G+VP+KG+VYPGRHE ++ E FE Q+++D R
Sbjct: 41 GQAVIYLRVSTPRQMLTAIDIDADGNSIATQREACMVRAKRAKAPVVREFVEPGNSAQTIAKRPVFREMLHYIEEHPEVTCVVIYMRSRAFRNLADAAITKRILASMGVKLISAKEDFGEGYMADAMEAVTDIMNEVQVRQSGEDIKQKLLNKAKNGGTVGRAKLGYINDRKNFDGRLVNTISVDEERAPLITWAFDQYATGEYSVWQLAQALDGLGLKTRASHKRPAQPVSASALAKILRDPYYTGVVPFKGQVYPGRHEAIVDNETFEACQEILDRR 319
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: A0A3P1WYM2_9ACTN (Recombinase family protein n=1 Tax=Arachnia propionica TaxID=1750 RepID=A0A3P1WYM2_9ACTN) HSP 1 Score: 345 bits (886), Expect = 8.890e-113 Identity = 174/249 (69.88%), Postives = 208/249 (83.53%), Query Frame = 1
Query: 124 MKRAKRLKVP--VAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDARMQR 864
M A+++ P +A FV PG SAQSIA RPVF++LL Y+E++P++ YV+IYMRSR FRN TDAAI KR+LA+M VKL+SAKEEFGEGYM DAMEAITDIMNEVQVRQ+GEDIS KM +KA++GGTTGRAKLGYLNVR++ DG VN + +DP RAPL++WAFEQYATG+YSL L EL GLTTRRTAKW ERPLSR++LA +LRDPYYIG V +KGEV+PGRH PL+S ELFERVQQV+D R +R
Sbjct: 1 MNGARKMLWPPAIAREFVGPGVSAQSIAKRPVFKELLRYVEDNPQIGYVVIYMRSRAFRNFTDAAIAKRVLATMGVKLVSAKEEFGEGYMGDAMEAITDIMNEVQVRQNGEDISNKMRHKAQNGGTTGRAKLGYLNVRKDFDGRLVNTVDVDPVRAPLIRWAFEQYATGEYSLAALTSELERQGLTTRRTAKWVERPLSRSQLALILRDPYYIGKVTFKGEVFPGRHVPLVSAELFERVQQVLDVRRRR 249
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: A0A349CT02_9MICO (Recombinase family protein (Fragment) n=2 Tax=Microbacterium TaxID=33882 RepID=A0A349CT02_9MICO) HSP 1 Score: 344 bits (882), Expect = 4.220e-112 Identity = 175/281 (62.28%), Postives = 216/281 (76.87%), Query Frame = 1
Query: 13 GAGTAVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVPVAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDAR 855
G AV+YLRVST RQL TA DID DGNSIATQR +++ + L+ VA+ FVEPG SAQ+I+ R F+ LL Y++EHP+V YV+IYMRSRVFRN TDAAITKR L V+LISAKEEFGEGYMADAMEAITDIMNEVQVR +GED+ KM +K + GGT GRAKLGYLNVR++ +G VN + +D +RAPL+ WAFEQYATG YS+ Q+ L E GLTTR + + +SR+RLA +LR+PYY G++ YKG +Y GRHEPL+S E F +VQ+V+D R
Sbjct: 15 GLAQAVVYLRVSTPRQLHTAADIDEDGNSIATQRVEALRKVRELRATVAKEFVEPGQSAQTISKRTEFKRLLRYVDEHPQVKYVVIYMRSRVFRNFTDAAITKRQLLEKGVRLISAKEEFGEGYMADAMEAITDIMNEVQVRMNGEDVKVKMAHKVEQGGTVGRAKLGYLNVRKDFNGRLVNTVDVDYERAPLVAWAFEQYATGRYSISQMTHMLEERGLTTRPSPSRPAQAVSRSRLALILRNPYYTGVIRYKGSLYVGRHEPLVSKETFLKVQEVLDHR 295
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: A0A561EAD2_9MICO (DNA invertase Pin-like site-specific DNA recombinase n=1 Tax=Rudaeicoccus suwonensis TaxID=657409 RepID=A0A561EAD2_9MICO) HSP 1 Score: 337 bits (865), Expect = 5.230e-111 Identity = 172/280 (61.43%), Postives = 216/280 (77.14%), Query Frame = 1
Query: 25 AVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVPVAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDARMQR 864
AV YLRVST RQ+ D+D +GNSIATQRE + K+A L + + FVEPG SAQ+I RPVF+ +L Y+ EHPEV YVIIYMRSR FRN DA +TKR L + VKL+SAKE+FG+G MADAMEA+TDIMNEVQVR SGEDI K+ +K ++GGTTGRAKLGYLNVR E DG +N IA+D +RAPL+K AFE YATGDYSL +L + +LG TTR + K+ ++P+S +L +LRDPYY+G+V YKGE +PGRHEP+I +LF++VQQVM+ R +R
Sbjct: 18 AVTYLRVSTTRQMSAGADVDAEGNSIATQREWSAKKAVALGASLQQEFVEPGASAQTIEKRPVFKQMLAYLGEHPEVDYVIIYMRSRAFRNLGDAVMTKRTLERLGVKLVSAKEDFGDGIMADAMEAVTDIMNEVQVRLSGEDIKIKLRHKVENGGTTGRAKLGYLNVRVEHDGRLINSIALDQERAPLVKQAFELYATGDYSLERLHVAMADLGFTTRPSRKFAQQPVSIAKLHTMLRDPYYVGIVTYKGEQFPGRHEPIIDQDLFDQVQQVMNHRSKR 297
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: A0A2W6V6S8_9MICO (Recombinase family protein n=5 Tax=Microbacteriaceae TaxID=85023 RepID=A0A2W6V6S8_9MICO) HSP 1 Score: 342 bits (876), Expect = 2.950e-110 Identity = 170/279 (60.93%), Postives = 215/279 (77.06%), Query Frame = 1
Query: 19 GTAVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVPVAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDAR 855
G A+ YLRVST RQL TA D+D DGNSIATQRE +++AK L VP+ FVEPG SAQ+I RP F+ LL +++ +P++ YV+IYMRSRVFRN DAAITKR L V+LISAKE FG+GYM DAMEAITD++NE+QVR SGEDI KM +K + GG+ GRAKLGYLNVR++ DG VN I +DP RAPL+ WAFEQYAT +S+ QL L + GLTTR+++K +PLS ++LA +LRDPYY G++ YKG+++PGRH PLIS ELF VQ+++D R
Sbjct: 90 GVAISYLRVSTTRQLNTAADLDEDGNSIATQREWVIRKAKELGVPILREFVEPGQSAQTIDKRPEFKKLLRFVDANPDIRYVVIYMRSRVFRNHLDAAITKRQLRDKGVELISAKENFGDGYMGDAMEAITDVVNELQVRMSGEDIRIKMAHKVERGGSVGRAKLGYLNVRKDFDGRLVNTIDVDPVRAPLIVWAFEQYATNQFSITQLQMMLEDQGLTTRQSSKRAAKPLSSSQLAMILRDPYYTGVIRYKGKLHPGRHTPLISKELFLAVQKILDGR 368
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: A0A4Q2M4A7_9MICO (Recombinase family protein n=1 Tax=Agromyces atrinae TaxID=592376 RepID=A0A4Q2M4A7_9MICO) HSP 1 Score: 341 bits (874), Expect = 1.430e-109 Identity = 170/279 (60.93%), Postives = 215/279 (77.06%), Query Frame = 1
Query: 19 GTAVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVPVAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDAR 855
G A+ YLRVST RQL TA D+D DGNSIATQRE +++AK L VP+ FVEPG SAQ+I RP F+ LL +++ +P++ YV+IYMRSRVFRN DAAITKR L V+LISAKE FG+GYM DAMEAITD++NE+QVR SGEDI KM +K + GG+ GRAKLGYLNVR++ DG VN I +DP RAPL+ WAFEQYAT +S+ QL L + GLTTR+++K +PLS ++LA +LRDPYY G++ YKG+++PGRH PLIS ELF VQ+++D R
Sbjct: 124 GMAISYLRVSTTRQLNTAADLDEDGNSIATQREWAIRKAKELGVPILPEFVEPGQSAQTIDKRPEFKKLLRFVDANPDIRYVVIYMRSRVFRNHLDAAITKRQLRDKGVELISAKENFGDGYMGDAMEAITDVVNELQVRMSGEDIRIKMAHKVERGGSVGRAKLGYLNVRKDFDGRLVNTIDVDPVRAPLIVWAFEQYATNQFSITQLQMMLEDQGLTTRQSSKRAAKPLSSSQLAMILRDPYYTGVIRYKGKLHPGRHTPLISKELFLAVQKILDGR 402
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: A0A7I7VC28_MYCFA (Recombinase domain-containing protein n=2 Tax=Mycolicibacterium fallax TaxID=1793 RepID=A0A7I7VC28_MYCFA) HSP 1 Score: 332 bits (852), Expect = 2.080e-109 Identity = 172/284 (60.56%), Postives = 213/284 (75.00%), Query Frame = 1
Query: 13 GAGTAVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVPVAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDARMQR 864
G AV YLRVST RQ+ T D+D +GNSIATQREA +A R+ + + FVEPG SAQ+I RP+F+ LL Y+ E+P+V+ VIIYMRSR FRN DA ITKR L +M VKL+SAKE+FGEG MADAMEA+TDI+NEVQVR SGEDI KM +KA+ GGT GRA +GY NVR E DG QVNGIA+D +RAPL+K AFE YATGDYS+ +L + +LGL R + G + LSR+ L +L DPYYIG+V YKGE +PGRH+P+I +LFERVQ+V++ R R
Sbjct: 8 GPQIAVSYLRVSTTRQMDTGADVDAEGNSIATQREANNAKAARMGALIEKEFVEPGASAQTIDKRPIFKQLLAYLGENPDVSLVIIYMRSRAFRNLGDAVITKRRLETMGVKLVSAKEDFGEGIMADAMEAVTDIINEVQVRMSGEDIKVKMRHKAQMGGTNGRAPIGYRNVRIEHDGRQVNGIAVDEERAPLIKQAFEMYATGDYSIDRLQETMADLGLRARPQGRGGAKELSRSHLHRMLSDPYYIGIVRYKGETFPGRHQPIIPADLFERVQKVIEDRSAR 291
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: UPI00131EFCFA (recombinase family protein n=1 Tax=Planctomonas deserti TaxID=2144185 RepID=UPI00131EFCFA) HSP 1 Score: 339 bits (869), Expect = 2.600e-109 Identity = 173/281 (61.57%), Postives = 213/281 (75.80%), Query Frame = 1
Query: 13 GAGTAVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVPVAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDAR 855
G AV YLRVST RQL TA D+D DGNSIATQR TM++ + L VP A+ F+EPG SAQ+IA R F+ LL Y+++HPEV YV+IYMRSRVFRN TDAAITKR L V+LISAKEEFGEGYMADAMEAITDIMNEVQVR +GED++ KM +K + GG+ GRAKLGYLNVR++ G VN I +DP+R PL+ WAFEQYATG YS+ +L R L GL TR + + +S +RLA +LRDPYY G+ YKG++Y GRHE L++ E + +VQ V+D+R
Sbjct: 39 GLAYAVTYLRVSTPRQLHTAADLDEDGNSIATQRVETMRKVRELGVPAAKEFIEPGQSAQTIAKRTEFKKLLRYVDDHPEVKYVVIYMRSRVFRNFTDAAITKRQLLEKGVRLISAKEEFGEGYMADAMEAITDIMNEVQVRMNGEDVAVKMAHKVEQGGSVGRAKLGYLNVRKDFGGRLVNTIDVDPERGPLVAWAFEQYATGRYSIARLQRLLEAQGLQTRPSPSNSAKTVSTSRLATILRDPYYTGINRYKGKLYVGRHEALVTKETYLKVQAVLDSR 319
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: UPI0018CE148F (recombinase family protein n=2 Tax=Corynebacteriales TaxID=85007 RepID=UPI0018CE148F) HSP 1 Score: 335 bits (859), Expect = 1.600e-108 Identity = 173/284 (60.92%), Postives = 214/284 (75.35%), Query Frame = 1
Query: 13 GAGTAVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVPVAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDARMQR 864
G AV YLRVST RQ+ T D+D +GNSIATQREA +A R+ + + FVEPG SAQ+I RPVF+ LL Y+ EHP+V+ VIIYMRSR FRN DA ITKR L +M VKL+SAKE+FGEG MADAMEA+TDI+NEVQVR SGEDI KM +KA+ GGT GRA +GY NVR E +G QVNGIA+D +RAPL+K AFE YATGDYS+ +L + +LGL R + G + LSR+ L ++ DPYYIG+V YKGE +PGRH+P+IS +LFERVQ+V++ R R
Sbjct: 8 GPQVAVSYLRVSTTRQMDTGADVDAEGNSIATQREANNAKAARMGAIIEKEFVEPGASAQTIDKRPVFKQLLAYLGEHPDVSLVIIYMRSRAFRNLGDAVITKRRLEAMGVKLVSAKEDFGEGIMADAMEAVTDIINEVQVRMSGEDIKVKMRHKAQMGGTNGRAPIGYRNVRIEHNGRQVNGIAVDEERAPLIKQAFEMYATGDYSIDRLQEAMADLGLRARPQGRGGAKELSRSHLHRMISDPYYIGIVRYKGETFPGRHQPIISADLFERVQKVIEDRSAR 291
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Match: H5U6L1_9ACTN (Putative recombinase n=1 Tax=Gordonia sputi NBRC 100414 TaxID=1089453 RepID=H5U6L1_9ACTN) HSP 1 Score: 333 bits (855), Expect = 6.770e-108 Identity = 173/284 (60.92%), Postives = 213/284 (75.00%), Query Frame = 1
Query: 13 GAGTAVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVPVAEVFVEPGHSAQSIANRPVFRDLLHYIEEHPEVTYVIIYMRSRVFRNQTDAAITKRILASMDVKLISAKEEFGEGYMADAMEAITDIMNEVQVRQSGEDISTKMLNKAKSGGTTGRAKLGYLNVRREVDGYQVNGIAIDPKRAPLMKWAFEQYATGDYSLVQLLRELTELGLTTRRTAKWGERPLSRTRLAELLRDPYYIGMVPYKGEVYPGRHEPLISPELFERVQQVMDARMQR 864
G AV YLRVST RQ+ T D+D +GNSIATQREA +A R+ + + FVEPG SAQ+I RPVF+ LL Y+ EHP+V+ VIIYMRSR FRN DA ITKR L +M VKL+SAKE+FGEG MADAMEA+TDI+NEVQVR SGEDI KM +KA+ GGT GRA +GY NVR E DG QVNGIA+D +RAPL+K AFE YATGDYS+ +L + +LGL R + G + LSR+ L +L DPYYIG+V YKGE +PGRH+P+I +LF+RVQ+V++ R R
Sbjct: 8 GPQIAVSYLRVSTTRQMDTGADVDAEGNSIATQREANNAKAARMGALIEKEFVEPGASAQTIDKRPVFKQLLAYLGEHPDVSLVIIYMRSRAFRNLGDAVITKRRLEAMGVKLVSAKEDFGEGIMADAMEAVTDIINEVQVRMSGEDIKVKMHHKAQMGGTNGRAPIGYRNVRIEHDGRQVNGIAVDEERAPLIKRAFEMYATGDYSIDRLQETMADLGLRARPQGRGGAKELSRSHLHRMLSDPYYIGIVRYKGETFPGRHQPIIPADLFDRVQKVIEDRSAR 291 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20208.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20208.1.1 >prot_P-wetherbeei_contig20208.1.1 ID=prot_P-wetherbeei_contig20208.1.1|Name=mRNA_P-wetherbeei_contig20208.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=288bp QRDPGAGTAVLYLRVSTQRQLRTATDIDPDGNSIATQREATMKRAKRLKVback to top mRNA from alignment at P-wetherbeei_contig20208:375..1238+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20208.1.1 ID=mRNA_P-wetherbeei_contig20208.1.1|Name=mRNA_P-wetherbeei_contig20208.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig20208:375..1238+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20208:375..1238+ >mRNA_P-wetherbeei_contig20208.1.1 ID=mRNA_P-wetherbeei_contig20208.1.1|Name=mRNA_P-wetherbeei_contig20208.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig20208:375..1238+ (Phaeothamnion wetherbeei SAG_119_79)back to top |