mRNA_P-wetherbeei_contig20185.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: D7FYN8_ECTSI (AN1 and C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYN8_ECTSI) HSP 1 Score: 113 bits (282), Expect = 1.160e-27 Identity = 57/117 (48.72%), Postives = 80/117 (68.38%), Query Frame = 1
Query: 1 SYAAHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAHSRNNCDPAQHK-SKKPKERCSAPTCREVLGLTNRHRCTRCGKADLCLKCRYPDRHDCPAAAGGRGGAVRSIGAAA 348
SYAAH C SG K+F+A++CPLC K++R + DP+ W+ H+R +C+P +K +K+ K+RC+A +CR VLG TN RC CGK + CL R+PD H+C A++ RG A S AAA
Sbjct: 39 SYAAHSCAASGNKDFRALVCPLCKKTVRFNGGQDPNQQWDLHTRTDCNPEDYKRAKQTKKRCAAASCRVVLGPTNTQRCASCGK-ETCLTHRFPDSHNCSASS--RGDARGSAAAAA 152
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: A0A5J4Y6K6_9CHLO (Zinc finger AN1 and C2H2 domain-containing stress-associated 16-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y6K6_9CHLO) HSP 1 Score: 101 bits (251), Expect = 3.290e-23 Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 10 AHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAHSRNNCDPAQHKSKKPKERCSAPTCREVLGLTNRHRCTRCGKADLCLKCRYPDRHDCP 297
+H C K+G++ ++CP+C+K+++L+ DDP+AV+E HSR +CDPA + + +C A CRE LG N + C CG +CLK R+P+ H CP
Sbjct: 47 SHSCSKAGSRETGTIVCPICAKAVKLTASDDPNAVFERHSRQDCDPANYAKVHQRPKCPAKGCREKLGTINTYTCKECG-VQVCLKHRFPETHQCP 141
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: A8IZN9_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IZN9_CHLRE) HSP 1 Score: 99.0 bits (245), Expect = 2.090e-22 Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 SYAAHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAHSRNNCDPAQHKSKKPKERCSAPTCREVLGLTNRHRCTRCGKADLCLKCRYPDRHDC 294
SYAAH CP SG+K ++CP+C+KS+R++ DP+A++E H+R +CDPA + K RC C+ L NR+RC C +A +CLK R P H C
Sbjct: 47 SYAAHACPNSGSKETTVIVCPICAKSVRMTSGQDPNALFEQHTRTDCDPANYDRVHKKPRCPVAGCKTKLTTINRYRCKHCSQA-ICLKHRDPADHRC 143
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: A0A836BBP4_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBP4_9CHLO) HSP 1 Score: 98.2 bits (243), Expect = 2.660e-21 Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 SYAAHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAHSRNNCDPAQHKSKKPKERCSAPTCREVLGLTNRHRCTRCGKADLCLKCRYPDRHDC 294
SYAAH CP SG+K ++CP+C+KS+R++ DP+A++E H+R +CDPA + K RC C+ L NR+RC C +A +CLK R P H C
Sbjct: 46 SYAAHACPSSGSKESTVIVCPICAKSVRMTPGTDPNALFEQHTRTDCDPANYDRVHKKPRCPVAGCKTKLTTINRYRCKHCNQA-ICLKHRDPADHRC 142
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: A0A1V9ZLT5_9STRA (AN1-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLT5_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 5.610e-20 Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 1 SYAAHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAHSRNNCDPAQHKSKK-PKERCSAPTCREVLGLTNRHRCTRCGK 249
+Y HECPK+GAK+ +A+ CPLC +I L+ D +AVWE H+R C P Q++ KK PKERC+A CREVL +N +CT C K
Sbjct: 37 TYDGHECPKAGAKDARAITCPLCRATIPLTGDMDENAVWETHARTTCKPEQYQEKKKPKERCAAEGCREVLSASNTVQCTTCRK 120
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: A0A7S1ATW2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ATW2_NOCSC) HSP 1 Score: 85.5 bits (210), Expect = 6.320e-18 Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 4 YAAHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAHSRNNCDPAQHKSKKPKERCSAPTCREVLGLTNRHRCTRCGKADLCLKCRYPDRHDC 294
Y H C + +++ Q VICPLC++S+R++ ++DP+ VWEAH + C K+ RC C+E LG +NR C RCG+ +CLK RY D H C
Sbjct: 52 YTCHGCQEE-SRSVQVVICPLCNQSLRVTSVEDPNTVWEAHFASGCKQVPKKT----HRCPVVGCKEQLGSSNRFDCQRCGQT-VCLKHRYEDDHAC 142
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: A0A067CPY8_SAPPC (C2H2-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPY8_SAPPC) HSP 1 Score: 70.5 bits (171), Expect = 6.680e-12 Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 1
Query: 1 SYAAHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAHSRNNCDPAQHKSKKPKERCSAPTCREVLGLTNRHRCTRCGKADLCLKCRYPDRHDCP 297
+Y AH C +GAK+ +A+ CPLC +I L+ D E KKPKERC+A +CREVL +N +C C K +CL+ R+ H CP
Sbjct: 35 TYDAHACAHAGAKDARAITCPLCRATIPLTGAMDVDEYEE-------------KKKPKERCAADSCREVLTASNTVQCNSCRKK-VCLRHRFETDHQCP 119
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: A0A2J8AAE7_9CHLO (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AAE7_9CHLO) HSP 1 Score: 66.2 bits (160), Expect = 6.540e-11 Identity = 24/49 (48.98%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 SYAAHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAHSRNNCDP 147
SY+AH CP +G+K+ ++CP+C+KS+RL+ D +AV++AH+R +CDP
Sbjct: 104 SYSAHACPLAGSKDTTVIVCPICAKSVRLAPSQDANAVFDAHTRTDCDP 152
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: A0A7S2XWQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWQ5_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 3.610e-9 Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 1 SYAAHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAH 126
SY AH CP +G ++ A+ICPLC K+I+L E DDP+ WEAH
Sbjct: 70 SYKAHGCPLAGGRDTLAIICPLCKKTIKLLENDDPNEKWEAH 111
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Match: A0A2K3DDL4_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DDL4_CHLRE) HSP 1 Score: 57.4 bits (137), Expect = 6.620e-7 Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 85 LSEMDDPHAVWEAHSRNNCDPAQHKSKKPKERCSAPTCREVLGLTNRHRCTRCGKADLCLKCRYPDRHDC 294
++ DP+A++E H+R +CDPA + K RC C+ L NR+RC C +A +CLK R P H C
Sbjct: 1 MTSGQDPNALFEQHTRTDCDPANYDRVHKKPRCPVAGCKTKLTTINRYRCKHCSQA-ICLKHRDPADHRC 69 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20185.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20185.1.1 >prot_P-wetherbeei_contig20185.1.1 ID=prot_P-wetherbeei_contig20185.1.1|Name=mRNA_P-wetherbeei_contig20185.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=141bp SYAAHECPKSGAKNFQAVICPLCSKSIRLSEMDDPHAVWEAHSRNNCDPAback to top mRNA from alignment at P-wetherbeei_contig20185:164..844+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20185.1.1 ID=mRNA_P-wetherbeei_contig20185.1.1|Name=mRNA_P-wetherbeei_contig20185.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=681bp|location=Sequence derived from alignment at P-wetherbeei_contig20185:164..844+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20185:164..844+ >mRNA_P-wetherbeei_contig20185.1.1 ID=mRNA_P-wetherbeei_contig20185.1.1|Name=mRNA_P-wetherbeei_contig20185.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig20185:164..844+ (Phaeothamnion wetherbeei SAG_119_79)back to top |