mRNA_P-wetherbeei_contig20116.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A6H5JY43_9PHAE (FA_desaturase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY43_9PHAE) HSP 1 Score: 370 bits (951), Expect = 4.410e-126 Identity = 176/283 (62.19%), Postives = 211/283 (74.56%), Query Frame = 1
Query: 4 KTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPL------------GFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSPPPG 816
+ +P L TLV+G +TTGGWLAHD VHGRG +C MR++GA+ CGLSS+WWSEKHN HHAFTNV+G DEDI+VEP L+LW P R+ P+R QH+YWPLPFSLTFL+WR SV TA ++L EGA LALHY L LVP PVA+GHVF+GG LTA +VTVTHTAEE+ + DEP FVE QF+T+RDA C DPLS ++WGGMQ QLEHHLFPT+PRYKY L PLV++FA +N LEYR T W+I+ DN++ LK VG AP NP SP PG
Sbjct: 38 RVNPWLGTLVMGIAHTTGGWLAHDMVHGRGGYCTAMRHYGALMCGLSSRWWSEKHNLHHAFTNVIGADEDIIVEPALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRFGSVKTAISEKLKLEGAFLALHYCWLLALVPLPVAIGHVFVGGWLTAIIVTVTHTAEEFSVK-DEPAHPSSPFEEEGDASFVETQFKTTRDAVCGDPLSEHLWGGMQYQLEHHLFPTIPRYKYPDLVPLVKKFAEENGLEYRSTGSWEIIRDNIKQLKRVGEAPTNPGSPEPG 319
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: D7G2Y4_ECTSI (Fatty acid desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y4_ECTSI) HSP 1 Score: 373 bits (958), Expect = 8.650e-126 Identity = 176/283 (62.19%), Postives = 211/283 (74.56%), Query Frame = 1
Query: 4 KTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPL------------GFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSPPPG 816
+ +P L TLV+G +TTGGWLAHD VHGRG++C MR++GA+ CGLSS+WWSEKHN HHAFTNV+G DEDI+VEP L+LW P R+ P+R QH+YWPLPFSLTFL+WR SV TA ++L EGA LALHY L LVP PVA+GHVF+GG LTAT+VTVTHTAEE+ + DEP FVE QF+T+RDA C DP S ++WGGMQ QLEHHLFPT+PRYKY L PLVQ+FA +N LEY+ T W+I+ DN+ LK VG AP NP SP PG
Sbjct: 131 RVNPWLGTLVMGMAHTTGGWLAHDMVHGRGRYCTAMRHYGALMCGLSSRWWSEKHNLHHAFTNVIGADEDIIVEPALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRFGSVKTAISEKLKLEGALLALHYCWLLALVPLPVAIGHVFVGGWLTATIVTVTHTAEEFSVK-DEPAHPSSPFEEEGDASFVETQFKTTRDAVCGDPFSEHLWGGMQYQLEHHLFPTLPRYKYRDLVPLVQKFAEENGLEYKSTGSWEIIRDNIMQLKRVGEAPTNPGSPEPG 412
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: D7FSV5_ECTSI (Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSV5_ECTSI) HSP 1 Score: 374 bits (959), Expect = 2.300e-125 Identity = 177/276 (64.13%), Postives = 215/276 (77.90%), Query Frame = 1
Query: 1 AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSPPPGFCDV 828
++T+P L +V+G +TTGGWLAHD VHGRGK+C+ MR++GA+ CGLSSKWWSEKHN HHAFTNVVGVDEDIM P +LW P R+ P+R QH+YWPLPFSLTFL+WR+ SV TA K+L EG LALHY LLA LVP PVA+GH+F+GG LTATLVTVTHTAEEY + D +VE QFRT+RDA + P++ YVWGGMQ QLEHHLFPT+PRYKY L PLV++FA +N +EYR T QW+I+ DN+ LK VG++PV P SP PG D+
Sbjct: 187 SRTNPWLGVVVMGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PPFWLWAPKHRRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAIAKKLKLEGGLLALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDS--SYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRQLVPLVRKFAEENGIEYRATPQWEIIKDNLALLKRVGSSPVMPGSPAPGAADI 458
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A836CAU7_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU7_9STRA) HSP 1 Score: 349 bits (896), Expect = 3.690e-116 Identity = 164/268 (61.19%), Postives = 201/268 (75.00%), Query Frame = 1
Query: 10 HPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSPPP 813
H + T VLG +TT GWLAHD++HGRGKW + MR FG + GL +KWWSEKHN HHAFTN+VGVDEDIMVEP LYLW P+++R+ P+R QH WP+PFS F +WR+ S+ TA K +L E L+LHY L LV VA+GH+ +GGLLTAT+VTVTHTAEE L+D + + FVEAQFRT+RDA+C DPLS YVWGGMQ QLEHHLFPT+PRYKY L P+++Q+AA+N LEYR+T WKI+ DNV LK V P + SP P
Sbjct: 169 HVLAGTCVLGVAHTTCGWLAHDFIHGRGKWPSFMRYFGCLTVGLGAKWWSEKHNLHHAFTNLVGVDEDIMVEPALYLWSPTEERDKPWRKFQHFLWPVPFSALFAMWRIDSIKTALKLKLWPEIVALSLHYVALLALVGPGVALGHIMLGGLLTATIVTVTHTAEEMLMD--DEMSFVEAQFRTTRDAKCTDPLSEYVWGGMQYQLEHHLFPTLPRYKYARLVPVIKQWAAENGLEYRVTGAWKIIADNVNQLKRVAAQPTDANSPSP 434
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A6U1MJH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MJH9_9STRA) HSP 1 Score: 317 bits (811), Expect = 4.140e-103 Identity = 154/274 (56.20%), Postives = 192/274 (70.07%), Query Frame = 1
Query: 1 AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYL-------LD----TDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAP 789
AK L + LG + TGGWL+HDYVHGRG WC MRNFG + GLS KWWSEKHNKHHA+TNV+GVDEDIMV+P L+LW P +++P+R QH+YW +PFS+T +WR S+ K +L EG LA +YA L+ + G V +GGLL AT+VTVTH AEEYL LD +D+P FV+ QFRT+RDA C DP+S Y+WGGMQ QLEHHLFP MPRYKY LAP+V+++A L+YR TDQW+I++DN+ LK VG AP
Sbjct: 171 AKVCAPLGLIGLGIVSATGGWLSHDYVHGRGPWCTFMRNFGCLSIGLSPKWWSEKHNKHHAWTNVIGVDEDIMVDPALFLWQPDPSKDVPWRRFQHLYWAVPFSITLWLWRFDSIKRVVKDKLWGEGIALAANYAFFLYLLGPAMFAGMVTLGGLLIATIVTVTHQAEEYLPNNDGIGLDGQESSDDP-SFVDMQFRTTRDAICRDPVSEYIWGGMQYQLEHHLFPIMPRYKYSKLAPVVKEWAEKVGLDYRATDQWQIISDNINYLKKVGEAP 443
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A7S2AXE7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXE7_9STRA) HSP 1 Score: 286 bits (732), Expect = 1.100e-90 Identity = 127/259 (49.03%), Postives = 180/259 (69.50%), Query Frame = 1
Query: 1 AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTV 777
A+ + +++ L+LG NT+ GWLAHDY+HGRGKW TMR FG + G+S+ WWS+KHN HHA TNV G+DED+MV+P LY+W P + P+R QH+YW LP+S+ F +WR+ S+ A+K++L E A + LHYA+L L P V + VFI GLLTA +VTV+H EE +D LG+VE+QF+++RD C +P+ Y+ GGM QLEHHLFPTMPRY Y L P+++QFA + +EY+ ++ I+ ++ + V
Sbjct: 213 ARRNTLISALLLGIANTSAGWLAHDYIHGRGKWAMTMRAFGMLGGGMSATWWSDKHNLHHALTNVAGIDEDLMVDPFLYMWAPDPKNDSPFRKFQHLYWMLPYSMLFAIWRIDSIKVAFKRKLWGEVAGMGLHYAMLFALFPVKVLLPAVFISGLLTAIIVTVSHQNEEIHMDGPHKLGYVESQFQSTRDYICGNPIFEYMAGGMNYQLEHHLFPTMPRYYYPKLVPVIKQFAKEQGIEYKTESEFAIIGRTIDKFREV 471
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A7S3BGK3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BGK3_9EUKA) HSP 1 Score: 280 bits (717), Expect = 1.650e-90 Identity = 139/264 (52.65%), Postives = 186/264 (70.45%), Query Frame = 1
Query: 28 LVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPY-RGLQHIYWPLPFSLTFLVWRVASV--ITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLL-DTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSP 807
L+L NT GWL+HDYVHGRG++ TMR FG + G+S+ WWS KHN HHA TN VG DEDI ++P L+LW P ++ + R QH+YWPLP+S+ FL WR S+ + A+KK E A LA H+A +VP V++ GL+TAT+VTVTH +EE L DT FVEAQFR++RDA+CN+P+S +WGGMQ QLEHHLFPTMPRY+Y A++ +++ FAA+ L+YR+T ++KI+ DNV+ LKT+ TAP P +P
Sbjct: 63 LMLAISNTLAGWLSHDYVHGRGRFATTMRGFGELVGGMSTTWWSNKHNMHHALTNEVGYDEDIALDPALHLWRPDPANDITWLRRWQHVYWPLPYSILFLYWRFDSIRYVLAHKK--WNEAARLAGHWAAFLAIVPAGPLFLSVWLSGLITATIVTVTHQSEEIFLGDTLRKYDFVEAQFRSTRDAKCNNPISHMLWGGMQWQLEHHLFPTMPRYRYPAVSKILKSFAAEQGLDYRVTGEFKIIADNVKLLKTLATAPQQPGNP 324
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A0M0JBD4_9EUKA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBD4_9EUKA) HSP 1 Score: 285 bits (728), Expect = 9.470e-90 Identity = 136/266 (51.13%), Postives = 182/266 (68.42%), Query Frame = 1
Query: 1 AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNP 798
A+ P LAT++L G+T+ GW+AHD+VHGRG++CATMR FGA+F G S+ WWS KHN HHA TN VGVDEDIM +P +LW P R+ +R LQH+Y +S+ F +WR+ SV T + RL EGA LA+HY L +PW VA+GHVF+ GL+TAT+VTV+H E+ L ++ +V AQ +RDA ++P S ++WGGMQ QLEHHLFPTMPRY+Y L P VQQ A++ +EYR+ + ++ N L+ V AP P
Sbjct: 231 ARPMPWLATVLLALGSTSAGWVAHDFVHGRGRFCATMRGFGALFNGHSATWWSNKHNLHHACTNQVGVDEDIMADPFFFLWAPDPARDSRWRRLQHVYALPVYSVLFALWRLNSVRTVFTSRLVGEGAWLAVHYTWLLACLPWQVALGHVFLAGLMTATIVTVSHQTED--LYHEQQHDWVRAQIGATRDAATSNPFSEWLWGGMQYQLEHHLFPTMPRYRYAQLVPRVQQLCAEHQIEYRVDGEAAVVARNFGRLREVAEAPAQP 494
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: R1DZI4_EMIHU (FA_desaturase domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZI4_EMIHU) HSP 1 Score: 277 bits (709), Expect = 5.870e-89 Identity = 136/261 (52.11%), Postives = 180/261 (68.97%), Query Frame = 1
Query: 34 LGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDRE-MPY-RGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLL-DTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSP 807
L GN+ GWL+HDYVHGR + MR FG + G+S+ WWS KHN HHA TN VG DEDI ++P L+LW P + +P+ R QH+YWPLP+S+ FL WR S+ K + E A LA H+A + LVP+ + + V++ GL+TAT+VTVTH +EE L DT FVEAQFR++RDA+CN+ S +WGGMQ QLEHHLFPTMPRY+Y AL+ ++ QFA++NDL YR+T ++KI+ DNV LK +G P P +P
Sbjct: 89 LAIGNSLAGWLSHDYVHGRQPFAWAMRGFGELIGGMSTTWWSNKHNMHHALTNEVGYDEDIALDPALHLWAPDPRHDTLPWLRQWQHVYWPLPYSILFLYWRFDSIRYVLKDKKWGEAARLAAHWAAFSALVPFRLLLASVWLSGLITATIVTVTHQSEEIFLGDTLRKYDFVEAQFRSTRDAKCNNWFSDVLWGGMQWQLEHHLFPTMPRYRYPALSKVLAQFASENDLTYRVTGEFKIIGDNVALLKKIGQGPQQPGNP 349
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A7S0LKA8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKA8_9EUKA) HSP 1 Score: 272 bits (696), Expect = 1.490e-87 Identity = 133/269 (49.44%), Postives = 183/269 (68.03%), Query Frame = 1
Query: 4 KTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLG-AEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSP 807
+ P+LAT++L G+T GWLAHDY+HGRG+WC+ MR FG + S+ WWS KHN HHA TN +GVDEDIM +P +LW P + R QH+Y PL +S+ F +WR S+ T RL EG +AL+Y +A+L+P VAVGHVF+ GL++AT+VTVTH +E+ +V+AQ R++R+A ++PLS ++WGGMQ QLEHHLFPTMPRYKY AL+P+V+++AA+ EYR +W+IL N+ L+ V P P +P
Sbjct: 27 RRSPLLATVLLALGSTASGWLAHDYIHGRGRWCSLMRGFGGLMNAHSATWWSNKHNLHHARTNEIGVDEDIMSDPFFFLWAPDPANDSRMRRYQHLYLPLVYSILFALWRFNSLRTVVSGRLWKTEGWPIALNYLWMALLLPPAVAVGHVFLAGLISATIVTVTHQSEDLFDGLQHD--WVDAQLRSTRNAVTSNPLSEWLWGGMQYQLEHHLFPTMPRYKYRALSPIVRRWAAEAGAEYREDGEWQILCRNLAMLQHVAHQPAVPSAP 293 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20116.1.2 >prot_P-wetherbeei_contig20116.1.2 ID=prot_P-wetherbeei_contig20116.1.2|Name=mRNA_P-wetherbeei_contig20116.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKback to top mRNA from alignment at P-wetherbeei_contig20116:112..1243- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20116.1.2 ID=mRNA_P-wetherbeei_contig20116.1.2|Name=mRNA_P-wetherbeei_contig20116.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1132bp|location=Sequence derived from alignment at P-wetherbeei_contig20116:112..1243- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20116:112..1243- >mRNA_P-wetherbeei_contig20116.1.2 ID=mRNA_P-wetherbeei_contig20116.1.2|Name=mRNA_P-wetherbeei_contig20116.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig20116:112..1243- (Phaeothamnion wetherbeei SAG_119_79)back to top |