mRNA_P-wetherbeei_contig20116.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20116.1.2
Unique NamemRNA_P-wetherbeei_contig20116.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A6H5JY43_9PHAE (FA_desaturase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY43_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 4.410e-126
Identity = 176/283 (62.19%), Postives = 211/283 (74.56%), Query Frame = 1
Query:    4 KTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPL------------GFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSPPPG 816
            + +P L TLV+G  +TTGGWLAHD VHGRG +C  MR++GA+ CGLSS+WWSEKHN HHAFTNV+G DEDI+VEP L+LW P   R+ P+R  QH+YWPLPFSLTFL+WR  SV TA  ++L  EGA LALHY  L  LVP PVA+GHVF+GG LTA +VTVTHTAEE+ +  DEP              FVE QF+T+RDA C DPLS ++WGGMQ QLEHHLFPT+PRYKY  L PLV++FA +N LEYR T  W+I+ DN++ LK VG AP NP SP PG
Sbjct:   38 RVNPWLGTLVMGIAHTTGGWLAHDMVHGRGGYCTAMRHYGALMCGLSSRWWSEKHNLHHAFTNVIGADEDIIVEPALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRFGSVKTAISEKLKLEGAFLALHYCWLLALVPLPVAIGHVFVGGWLTAIIVTVTHTAEEFSVK-DEPAHPSSPFEEEGDASFVETQFKTTRDAVCGDPLSEHLWGGMQYQLEHHLFPTIPRYKYPDLVPLVKKFAEENGLEYRSTGSWEIIRDNIKQLKRVGEAPTNPGSPEPG 319          
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: D7G2Y4_ECTSI (Fatty acid desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y4_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 8.650e-126
Identity = 176/283 (62.19%), Postives = 211/283 (74.56%), Query Frame = 1
Query:    4 KTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPL------------GFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSPPPG 816
            + +P L TLV+G  +TTGGWLAHD VHGRG++C  MR++GA+ CGLSS+WWSEKHN HHAFTNV+G DEDI+VEP L+LW P   R+ P+R  QH+YWPLPFSLTFL+WR  SV TA  ++L  EGA LALHY  L  LVP PVA+GHVF+GG LTAT+VTVTHTAEE+ +  DEP              FVE QF+T+RDA C DP S ++WGGMQ QLEHHLFPT+PRYKY  L PLVQ+FA +N LEY+ T  W+I+ DN+  LK VG AP NP SP PG
Sbjct:  131 RVNPWLGTLVMGMAHTTGGWLAHDMVHGRGRYCTAMRHYGALMCGLSSRWWSEKHNLHHAFTNVIGADEDIIVEPALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRFGSVKTAISEKLKLEGALLALHYCWLLALVPLPVAIGHVFVGGWLTATIVTVTHTAEEFSVK-DEPAHPSSPFEEEGDASFVETQFKTTRDAVCGDPFSEHLWGGMQYQLEHHLFPTLPRYKYRDLVPLVQKFAEENGLEYKSTGSWEIIRDNIMQLKRVGEAPTNPGSPEPG 412          
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: D7FSV5_ECTSI (Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSV5_ECTSI)

HSP 1 Score: 374 bits (959), Expect = 2.300e-125
Identity = 177/276 (64.13%), Postives = 215/276 (77.90%), Query Frame = 1
Query:    1 AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSPPPGFCDV 828
            ++T+P L  +V+G  +TTGGWLAHD VHGRGK+C+ MR++GA+ CGLSSKWWSEKHN HHAFTNVVGVDEDIM  P  +LW P   R+ P+R  QH+YWPLPFSLTFL+WR+ SV TA  K+L  EG  LALHY LLA LVP PVA+GH+F+GG LTATLVTVTHTAEEY  + D    +VE QFRT+RDA  + P++ YVWGGMQ QLEHHLFPT+PRYKY  L PLV++FA +N +EYR T QW+I+ DN+  LK VG++PV P SP PG  D+
Sbjct:  187 SRTNPWLGVVVMGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PPFWLWAPKHRRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAIAKKLKLEGGLLALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDS--SYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRQLVPLVRKFAEENGIEYRATPQWEIIKDNLALLKRVGSSPVMPGSPAPGAADI 458          
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A836CAU7_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU7_9STRA)

HSP 1 Score: 349 bits (896), Expect = 3.690e-116
Identity = 164/268 (61.19%), Postives = 201/268 (75.00%), Query Frame = 1
Query:   10 HPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSPPP 813
            H +  T VLG  +TT GWLAHD++HGRGKW + MR FG +  GL +KWWSEKHN HHAFTN+VGVDEDIMVEP LYLW P+++R+ P+R  QH  WP+PFS  F +WR+ S+ TA K +L  E   L+LHY  L  LV   VA+GH+ +GGLLTAT+VTVTHTAEE L+D  + + FVEAQFRT+RDA+C DPLS YVWGGMQ QLEHHLFPT+PRYKY  L P+++Q+AA+N LEYR+T  WKI+ DNV  LK V   P +  SP P
Sbjct:  169 HVLAGTCVLGVAHTTCGWLAHDFIHGRGKWPSFMRYFGCLTVGLGAKWWSEKHNLHHAFTNLVGVDEDIMVEPALYLWSPTEERDKPWRKFQHFLWPVPFSALFAMWRIDSIKTALKLKLWPEIVALSLHYVALLALVGPGVALGHIMLGGLLTATIVTVTHTAEEMLMD--DEMSFVEAQFRTTRDAKCTDPLSEYVWGGMQYQLEHHLFPTLPRYKYARLVPVIKQWAAENGLEYRVTGAWKIIADNVNQLKRVAAQPTDANSPSP 434          
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A6U1MJH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MJH9_9STRA)

HSP 1 Score: 317 bits (811), Expect = 4.140e-103
Identity = 154/274 (56.20%), Postives = 192/274 (70.07%), Query Frame = 1
Query:    1 AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYL-------LD----TDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAP 789
            AK    L  + LG  + TGGWL+HDYVHGRG WC  MRNFG +  GLS KWWSEKHNKHHA+TNV+GVDEDIMV+P L+LW P   +++P+R  QH+YW +PFS+T  +WR  S+    K +L  EG  LA +YA    L+   +  G V +GGLL AT+VTVTH AEEYL       LD    +D+P  FV+ QFRT+RDA C DP+S Y+WGGMQ QLEHHLFP MPRYKY  LAP+V+++A    L+YR TDQW+I++DN+  LK VG AP
Sbjct:  171 AKVCAPLGLIGLGIVSATGGWLSHDYVHGRGPWCTFMRNFGCLSIGLSPKWWSEKHNKHHAWTNVIGVDEDIMVDPALFLWQPDPSKDVPWRRFQHLYWAVPFSITLWLWRFDSIKRVVKDKLWGEGIALAANYAFFLYLLGPAMFAGMVTLGGLLIATIVTVTHQAEEYLPNNDGIGLDGQESSDDP-SFVDMQFRTTRDAICRDPVSEYIWGGMQYQLEHHLFPIMPRYKYSKLAPVVKEWAEKVGLDYRATDQWQIISDNINYLKKVGEAP 443          
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A7S2AXE7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXE7_9STRA)

HSP 1 Score: 286 bits (732), Expect = 1.100e-90
Identity = 127/259 (49.03%), Postives = 180/259 (69.50%), Query Frame = 1
Query:    1 AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTV 777
            A+ + +++ L+LG  NT+ GWLAHDY+HGRGKW  TMR FG +  G+S+ WWS+KHN HHA TNV G+DED+MV+P LY+W P    + P+R  QH+YW LP+S+ F +WR+ S+  A+K++L  E A + LHYA+L  L P  V +  VFI GLLTA +VTV+H  EE  +D    LG+VE+QF+++RD  C +P+  Y+ GGM  QLEHHLFPTMPRY Y  L P+++QFA +  +EY+   ++ I+   ++  + V
Sbjct:  213 ARRNTLISALLLGIANTSAGWLAHDYIHGRGKWAMTMRAFGMLGGGMSATWWSDKHNLHHALTNVAGIDEDLMVDPFLYMWAPDPKNDSPFRKFQHLYWMLPYSMLFAIWRIDSIKVAFKRKLWGEVAGMGLHYAMLFALFPVKVLLPAVFISGLLTAIIVTVSHQNEEIHMDGPHKLGYVESQFQSTRDYICGNPIFEYMAGGMNYQLEHHLFPTMPRYYYPKLVPVIKQFAKEQGIEYKTESEFAIIGRTIDKFREV 471          
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A7S3BGK3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BGK3_9EUKA)

HSP 1 Score: 280 bits (717), Expect = 1.650e-90
Identity = 139/264 (52.65%), Postives = 186/264 (70.45%), Query Frame = 1
Query:   28 LVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPY-RGLQHIYWPLPFSLTFLVWRVASV--ITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLL-DTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSP 807
            L+L   NT  GWL+HDYVHGRG++  TMR FG +  G+S+ WWS KHN HHA TN VG DEDI ++P L+LW P    ++ + R  QH+YWPLP+S+ FL WR  S+  + A+KK    E A LA H+A    +VP       V++ GL+TAT+VTVTH +EE  L DT     FVEAQFR++RDA+CN+P+S  +WGGMQ QLEHHLFPTMPRY+Y A++ +++ FAA+  L+YR+T ++KI+ DNV+ LKT+ TAP  P +P
Sbjct:   63 LMLAISNTLAGWLSHDYVHGRGRFATTMRGFGELVGGMSTTWWSNKHNMHHALTNEVGYDEDIALDPALHLWRPDPANDITWLRRWQHVYWPLPYSILFLYWRFDSIRYVLAHKK--WNEAARLAGHWAAFLAIVPAGPLFLSVWLSGLITATIVTVTHQSEEIFLGDTLRKYDFVEAQFRSTRDAKCNNPISHMLWGGMQWQLEHHLFPTMPRYRYPAVSKILKSFAAEQGLDYRVTGEFKIIADNVKLLKTLATAPQQPGNP 324          
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A0M0JBD4_9EUKA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBD4_9EUKA)

HSP 1 Score: 285 bits (728), Expect = 9.470e-90
Identity = 136/266 (51.13%), Postives = 182/266 (68.42%), Query Frame = 1
Query:    1 AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNP 798
            A+  P LAT++L  G+T+ GW+AHD+VHGRG++CATMR FGA+F G S+ WWS KHN HHA TN VGVDEDIM +P  +LW P   R+  +R LQH+Y    +S+ F +WR+ SV T +  RL  EGA LA+HY  L   +PW VA+GHVF+ GL+TAT+VTV+H  E+  L  ++   +V AQ   +RDA  ++P S ++WGGMQ QLEHHLFPTMPRY+Y  L P VQQ  A++ +EYR+  +  ++  N   L+ V  AP  P
Sbjct:  231 ARPMPWLATVLLALGSTSAGWVAHDFVHGRGRFCATMRGFGALFNGHSATWWSNKHNLHHACTNQVGVDEDIMADPFFFLWAPDPARDSRWRRLQHVYALPVYSVLFALWRLNSVRTVFTSRLVGEGAWLAVHYTWLLACLPWQVALGHVFLAGLMTATIVTVSHQTED--LYHEQQHDWVRAQIGATRDAATSNPFSEWLWGGMQYQLEHHLFPTMPRYRYAQLVPRVQQLCAEHQIEYRVDGEAAVVARNFGRLREVAEAPAQP 494          
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: R1DZI4_EMIHU (FA_desaturase domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZI4_EMIHU)

HSP 1 Score: 277 bits (709), Expect = 5.870e-89
Identity = 136/261 (52.11%), Postives = 180/261 (68.97%), Query Frame = 1
Query:   34 LGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDRE-MPY-RGLQHIYWPLPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLL-DTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSP 807
            L  GN+  GWL+HDYVHGR  +   MR FG +  G+S+ WWS KHN HHA TN VG DEDI ++P L+LW P    + +P+ R  QH+YWPLP+S+ FL WR  S+    K +   E A LA H+A  + LVP+ + +  V++ GL+TAT+VTVTH +EE  L DT     FVEAQFR++RDA+CN+  S  +WGGMQ QLEHHLFPTMPRY+Y AL+ ++ QFA++NDL YR+T ++KI+ DNV  LK +G  P  P +P
Sbjct:   89 LAIGNSLAGWLSHDYVHGRQPFAWAMRGFGELIGGMSTTWWSNKHNMHHALTNEVGYDEDIALDPALHLWAPDPRHDTLPWLRQWQHVYWPLPYSILFLYWRFDSIRYVLKDKKWGEAARLAAHWAAFSALVPFRLLLASVWLSGLITATIVTVTHQSEEIFLGDTLRKYDFVEAQFRSTRDAKCNNWFSDVLWGGMQWQLEHHLFPTMPRYRYPALSKVLAQFASENDLTYRVTGEFKIIGDNVALLKKIGQGPQQPGNP 349          
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Match: A0A7S0LKA8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKA8_9EUKA)

HSP 1 Score: 272 bits (696), Expect = 1.490e-87
Identity = 133/269 (49.44%), Postives = 183/269 (68.03%), Query Frame = 1
Query:    4 KTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSKWWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWPLPFSLTFLVWRVASVITAYKKRLG-AEGACLALHYALLAVLVPWPVAVGHVFIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTYVWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILTDNVENLKTVGTAPVNPLSP 807
            +  P+LAT++L  G+T  GWLAHDY+HGRG+WC+ MR FG +    S+ WWS KHN HHA TN +GVDEDIM +P  +LW P    +   R  QH+Y PL +S+ F +WR  S+ T    RL   EG  +AL+Y  +A+L+P  VAVGHVF+ GL++AT+VTVTH +E+          +V+AQ R++R+A  ++PLS ++WGGMQ QLEHHLFPTMPRYKY AL+P+V+++AA+   EYR   +W+IL  N+  L+ V   P  P +P
Sbjct:   27 RRSPLLATVLLALGSTASGWLAHDYIHGRGRWCSLMRGFGGLMNAHSATWWSNKHNLHHARTNEIGVDEDIMSDPFFFLWAPDPANDSRMRRYQHLYLPLVYSILFALWRFNSLRTVVSGRLWKTEGWPIALNYLWMALLLPPAVAVGHVFLAGLISATIVTVTHQSEDLFDGLQHD--WVDAQLRSTRNAVTSNPLSEWLWGGMQYQLEHHLFPTMPRYKYRALSPIVRRWAAEAGAEYREDGEWQILCRNLAMLQHVAHQPAVPSAP 293          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20116.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JY43_9PHAE4.410e-12662.19FA_desaturase domain-containing protein n=1 Tax=Ec... [more]
D7G2Y4_ECTSI8.650e-12662.19Fatty acid desaturase n=1 Tax=Ectocarpus siliculos... [more]
D7FSV5_ECTSI2.300e-12564.13Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CAU7_9STRA3.690e-11661.19Fatty acid desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A6U1MJH9_9STRA4.140e-10356.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2AXE7_9STRA1.100e-9049.03Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3BGK3_9EUKA1.650e-9052.65Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A0M0JBD4_9EUKA9.470e-9051.13Cytochrome b5 heme-binding domain-containing prote... [more]
R1DZI4_EMIHU5.870e-8952.11FA_desaturase domain-containing protein n=1 Tax=Em... [more]
A0A7S0LKA8_9EUKA1.490e-8749.44Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20116contigP-wetherbeei_contig20116:112..1243 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FSV5
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N,Cyt-b5,FA_desaturase
Model size834
Max annot lvl2759|Eukaryota
KEGG koko:K21737
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001505,GO:0001820,GO:0002682,GO:0003008,GO:0003012,GO:0003674,GO:0003824,GO:0004768,GO:0005575,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006837,GO:0006936,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007271,GO:0007275,GO:0007588,GO:0007610,GO:0007631,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009914,GO:0009987,GO:0010817,GO:0014055,GO:0015695,GO:0015696,GO:0015844,GO:0015850,GO:0015870,GO:0015893,GO:0016020,GO:0016021,GO:0016053,GO:0016192,GO:0016197,GO:0016215,GO:0016491,GO:0016705,GO:0016717,GO:0018991,GO:0019098,GO:0019752,GO:0022414,GO:0023052,GO:0023061,GO:0030421,GO:0031224,GO:0031347,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032940,GO:0033036,GO:0033559,GO:0035264,GO:0040002,GO:0040007,GO:0040011,GO:0042221,GO:0042335,GO:0042493,GO:0042755,GO:0043050,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044425,GO:0045088,GO:0046394,GO:0046879,GO:0046903,GO:0046907,GO:0048583,GO:0048589,GO:0048609,GO:0048856,GO:0050776,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055114,GO:0061526,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072330,GO:0080134,GO:0098916,GO:0099536,GO:0099537,GO:0099643,GO:1901374,GO:1901576
Exons2
Evalue3.77e-126
EggNOG OGsCOG3239@1|root,KOG4232@2759|Eukaryota
EC1.14.19.38,1.14.19.47
Descriptionunsaturated fatty acid biosynthetic process
Cds size834
COG categoryI
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186191.3784766-CDS-P-wetherbeei_contig20116:111..7261683186191.3784766-CDS-P-wetherbeei_contig20116:111..726Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20116 112..726 -
1683186191.391866-CDS-P-wetherbeei_contig20116:1024..12431683186191.391866-CDS-P-wetherbeei_contig20116:1024..1243Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20116 1025..1243 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20116.1.2prot_P-wetherbeei_contig20116.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20116 112..1243 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20116.1.2

>prot_P-wetherbeei_contig20116.1.2 ID=prot_P-wetherbeei_contig20116.1.2|Name=mRNA_P-wetherbeei_contig20116.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp
AKTHPVLATLVLGFGNTTGGWLAHDYVHGRGKWCATMRNFGAIFCGLSSK
WWSEKHNKHHAFTNVVGVDEDIMVEPLLYLWPPSQDREMPYRGLQHIYWP
LPFSLTFLVWRVASVITAYKKRLGAEGACLALHYALLAVLVPWPVAVGHV
FIGGLLTATLVTVTHTAEEYLLDTDEPLGFVEAQFRTSRDAQCNDPLSTY
VWGGMQRQLEHHLFPTMPRYKYEALAPLVQQFAADNDLEYRITDQWKILT
DNVENLKTVGTAPVNPLSPPPGFCDVV*
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mRNA from alignment at P-wetherbeei_contig20116:112..1243-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20116.1.2 ID=mRNA_P-wetherbeei_contig20116.1.2|Name=mRNA_P-wetherbeei_contig20116.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1132bp|location=Sequence derived from alignment at P-wetherbeei_contig20116:112..1243- (Phaeothamnion wetherbeei SAG_119_79)
GCGAAGACGCACCCGGTGTTGGCAACGCTCGTGCTAGGCTTCGGCAACAC GACCGGCGGCTGGCTGGCGCACGACTACGTGCATGGGAGGGGGAAGTGGT GCGCGACGATGCGCAACTTCGGTGCCATCTTCTGTGGGCTCAGCTCCAAG TGGTGGAGCGAGAAACACAACAAGCACCATGCCTTTACCAACGTCGTTGG TGTGGATGAGGACATTATGGTGAGCTGTTTCTGTTTGCATGCGCGCTGGC TGGTTTTATCGTTCGCTGTGGAAGGTTTTGTTAAGCAAGTCAGCGCGTTT CATTATATCGAAAAGAGTTTCAACGGTAGTTTTTTCCTGGTGCAACGATC TTGCGAATGACGTAATGCGGTTTATTTTGGAGGAAGAAATGGTATTGATA AGCAAGGATTTATTCTTTTCGGTCTAGCTGTGGCCTTCGAAGGGGGGGTG TTGAAAACCAGTACCCTAAACCGTTCCCCAATTCATTTATCCTTTTCCCC CTTTCTCGCGTGGGCAGGTTGAGCCGCTGCTGTACTTATGGCCCCCGTCG CAGGACCGCGAGATGCCGTACCGCGGCCTCCAGCACATCTACTGGCCGCT GCCCTTCTCGCTCACCTTCCTCGTCTGGCGGGTGGCATCGGTCATCACGG CGTACAAGAAGCGCCTCGGGGCCGAGGGCGCCTGCCTGGCGCTCCACTAC GCGCTGCTGGCGGTGCTGGTGCCGTGGCCAGTCGCCGTCGGGCACGTCTT CATCGGGGGCCTGCTGACGGCAACGCTGGTCACAGTAACGCACACGGCGG AGGAGTACCTGCTGGACACGGACGAGCCGCTGGGGTTCGTCGAGGCGCAG TTCCGCACGAGCCGCGATGCGCAGTGCAACGACCCGCTGAGCACGTACGT ATGGGGCGGGATGCAGCGGCAGCTGGAGCACCACCTCTTCCCCACGATGC CACGCTACAAGTACGAAGCGCTGGCTCCGCTGGTGCAGCAGTTCGCGGCG GATAATGACCTCGAGTACCGCATCACGGACCAGTGGAAGATTCTGACGGA CAACGTGGAAAACCTCAAGACTGTCGGCACGGCCCCCGTCAACCCGCTGT CGCCGCCGCCGGGTTTCTGCGACGTCGTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20116:112..1243-

>mRNA_P-wetherbeei_contig20116.1.2 ID=mRNA_P-wetherbeei_contig20116.1.2|Name=mRNA_P-wetherbeei_contig20116.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig20116:112..1243- (Phaeothamnion wetherbeei SAG_119_79)
GCGAAGACGCACCCGGTGTTGGCAACGCTCGTGCTAGGCTTCGGCAACAC
GACCGGCGGCTGGCTGGCGCACGACTACGTGCATGGGAGGGGGAAGTGGT
GCGCGACGATGCGCAACTTCGGTGCCATCTTCTGTGGGCTCAGCTCCAAG
TGGTGGAGCGAGAAACACAACAAGCACCATGCCTTTACCAACGTCGTTGG
TGTGGATGAGGACATTATGGTTGAGCCGCTGCTGTACTTATGGCCCCCGT
CGCAGGACCGCGAGATGCCGTACCGCGGCCTCCAGCACATCTACTGGCCG
CTGCCCTTCTCGCTCACCTTCCTCGTCTGGCGGGTGGCATCGGTCATCAC
GGCGTACAAGAAGCGCCTCGGGGCCGAGGGCGCCTGCCTGGCGCTCCACT
ACGCGCTGCTGGCGGTGCTGGTGCCGTGGCCAGTCGCCGTCGGGCACGTC
TTCATCGGGGGCCTGCTGACGGCAACGCTGGTCACAGTAACGCACACGGC
GGAGGAGTACCTGCTGGACACGGACGAGCCGCTGGGGTTCGTCGAGGCGC
AGTTCCGCACGAGCCGCGATGCGCAGTGCAACGACCCGCTGAGCACGTAC
GTATGGGGCGGGATGCAGCGGCAGCTGGAGCACCACCTCTTCCCCACGAT
GCCACGCTACAAGTACGAAGCGCTGGCTCCGCTGGTGCAGCAGTTCGCGG
CGGATAATGACCTCGAGTACCGCATCACGGACCAGTGGAAGATTCTGACG
GACAACGTGGAAAACCTCAAGACTGTCGGCACGGCCCCCGTCAACCCGCT
GTCGCCGCCGCCGGGTTTCTGCGACGTCGTCTGA
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