mRNA_P-wetherbeei_contig20013.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: A0A7C6PZT4_9FIRM (CoA transferase subunit A n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7C6PZT4_9FIRM) HSP 1 Score: 94.4 bits (233), Expect = 2.010e-21 Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 16 KLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMYRAAVE 282
KL TL+ A A VK G LGGM L+R P+A E+IRQ ++L LL + GFE D+LVGAGCV++VRSCYFGL+ GLAPM++ VE
Sbjct: 4 KLMTLTEA-AQLVKDGDLIGLGGMTLYRRPIAFVHELIRQAKKNLTLLAFTGGFESDLLVGAGCVSTVRSCYFGLESFGLAPMFKRRVE 91
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: A0A7C7QQ91_9CHLR (CoA transferase subunit A (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7QQ91_9CHLR) HSP 1 Score: 88.2 bits (217), Expect = 1.280e-20 Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 13 DKLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMY 267
DK+ +L A A V+ G ALGGM L+R PVA ++IRQG DL LL AG+E D+LVGAG V VR+CYFGL+V GLAPM+
Sbjct: 8 DKVISLQEA-ARLVRPGDTLALGGMTLYRRPVAFVRQLIRQGTGDLILLALTAGYESDLLVGAGLVRRVRTCYFGLEVFGLAPMF 91
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: A0A3C1A1L2_9CHLR (CoA transferase subunit A n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3C1A1L2_9CHLR) HSP 1 Score: 91.7 bits (226), Expect = 1.640e-20 Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 13 DKLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMY 267
DK+ TLS A+A V+ G ALGGM L+R PVA E+IR G + L LL AG+E D+LVGAG V VR+CYFGL+V GLAPM+
Sbjct: 3 DKVVTLSEAVA-LVQPGDTIALGGMTLYRRPVAFVRELIRSGVKGLTLLALTAGYESDLLVGAGSVKRVRTCYFGLEVFGLAPMF 86
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: A0A523VQZ0_9ARCH (CoA transferase subunit A (Fragment) n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A523VQZ0_9ARCH) HSP 1 Score: 87.8 bits (216), Expect = 3.430e-20 Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 13 DKLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMYRAAVE 282
KL L AI+ C++ G +GG++ +R P++A EIIRQ +DL + +V G + D+L+ GC++ VRSC+ G+++ G+AP YR AVE
Sbjct: 4 SKLMNLKEAISTCIQDGDLIGIGGLSFWRKPISACREIIRQNKKDLSICTFVGGIDVDMLIAGGCISEVRSCFVGMEIFGMAPHYRKAVE 93
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: A0A5C9EKZ2_9ARCH (Glutaconate CoA-transferase subunit A n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A5C9EKZ2_9ARCH) HSP 1 Score: 90.9 bits (224), Expect = 4.820e-20 Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 7 RPDKLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMYRAAVE 282
R KL +L AI+ VK G GG++ +R P+AA EIIRQG +L L +V G E D+L+GAGC + VRSC+ G+++ G+AP YR A+E
Sbjct: 5 RKSKLMSLEEAISKHVKDGDLVGFGGLSFWRKPIAACHEIIRQGLSNLTLCTFVGGIEIDMLIGAGCASEVRSCFVGMEIFGMAPNYRKAIE 96
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: A0A0F9H7Q4_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9H7Q4_9ZZZZ) HSP 1 Score: 86.7 bits (213), Expect = 1.880e-18 Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 13 DKLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMYRAAVE 282
KL +L AI+ V+ G +GG++ +R P++A E+IRQ ++L + +V G E D+LVGAGCV+ VRSC+ G+++ G+AP YR AVE
Sbjct: 4 SKLMSLEEAISTNVQDGDLVGIGGLSFWRKPISACRELIRQNKKNLNICTFVGGIEVDMLVGAGCVSEVRSCFVGMEIFGMAPHYRKAVE 93
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: A0A532THF0_9ARCH (Uncharacterized protein n=2 Tax=unclassified Lokiarchaeota TaxID=1655640 RepID=A0A532THF0_9ARCH) HSP 1 Score: 85.9 bits (211), Expect = 3.670e-18 Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 7 RPDKLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMYRAAVE 282
R KL +L AI+ ++ G +GG++ +R P++A EIIRQ +DL L +V G E D+L+ GC++ VRSC+ G+++ G+AP +R AVE
Sbjct: 2 RKSKLLSLEEAISTYIQDGDLVGIGGLSFWRKPISACREIIRQNKKDLSLCTFVGGIEVDMLIAGGCISEVRSCFVGMEIFGMAPNFRKAVE 93
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: A0A532THG7_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Lokiarchaeota archaeon Loki_b32 TaxID=2012491 RepID=A0A532THG7_9ARCH) HSP 1 Score: 84.0 bits (206), Expect = 4.450e-18 Identity = 38/90 (42.22%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 13 DKLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMYRAAVE 282
KL L AI+ V+ G +GG++ +R P++A EIIRQ +DL + +V G + D+L+ GC++ VRSC+ G+++ G+AP YR AVE
Sbjct: 4 SKLMPLQEAISTYVQDGDLIGIGGLSFWRKPISACREIIRQNKKDLSICTFVGGIDVDMLIAGGCISEVRSCFIGMEIFGMAPHYRKAVE 93
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: UPI001E56F914 (CoA transferase subunit A n=2 Tax=Variovorax sp. IB41 TaxID=2779370 RepID=UPI001E56F914) HSP 1 Score: 85.5 bits (210), Expect = 4.650e-18 Identity = 41/77 (53.25%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 52 VKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMYRAAVE 282
V HG A+GGM L+R PV AA + R G RDL +L AG E D+L+GAGCV +RSCY GL++ GLAP Y A
Sbjct: 14 VTHGTRMAIGGMTLYRRPVGAAMALARAGIRDLDVLTLTAGIETDLLIGAGCVRVLRSCYTGLEIAGLAPHYTRAAR 90
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Match: A0A842UCD8_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A842UCD8_9ARCH) HSP 1 Score: 85.5 bits (210), Expect = 5.060e-18 Identity = 41/90 (45.56%), Postives = 63/90 (70.00%), Query Frame = 1
Query: 13 DKLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLCLLDYVAGFEGDILVGAGCVASVRSCYFGLDVVGLAPMYRAAVE 282
KL +LS A+ A V++G +GG++ +R PV+ EIIRQG ++L L +V G E D+LVGAGCV+ +++ + G++V G+AP YR A+E
Sbjct: 3 SKLMSLSEAVDAYVQNGDIVGIGGLSFWRKPVSLCREIIRQGKKNLTLCTFVGGIEIDMLVGAGCVSEIKASFVGMEVFGMAPNYRKAIE 92 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20013.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20013.1.1 >prot_P-wetherbeei_contig20013.1.1 ID=prot_P-wetherbeei_contig20013.1.1|Name=mRNA_P-wetherbeei_contig20013.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp RWRPDKLTTLSAAIAACVKHGAPPALGGMALFRSPVAAAAEIIRQGFRDLback to top mRNA from alignment at P-wetherbeei_contig20013:3..287- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20013.1.1 ID=mRNA_P-wetherbeei_contig20013.1.1|Name=mRNA_P-wetherbeei_contig20013.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig20013:3..287- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20013:3..287- >mRNA_P-wetherbeei_contig20013.1.1 ID=mRNA_P-wetherbeei_contig20013.1.1|Name=mRNA_P-wetherbeei_contig20013.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig20013:3..287- (Phaeothamnion wetherbeei SAG_119_79)back to top |